RNA–Protein interactions for RNA: ENST00000328863.8

CLRN1-203, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-203ENST00000328863 BMP4P12644 408 aa12.88□□□□□ -0.35
CLRN1-203ENST00000328863 GSTM3P21266 225 aa12.88□□□□□ -0.35
CLRN1-203ENST00000328863 NOS3P29474 1203 aa12.88□□□□□ -0.35
CLRN1-203ENST00000328863 TTKP33981 857 aa12.88□□□□□ -0.35
CLRN1-203ENST00000328863 PTH2RP49190 550 aa12.88□□□□□ -0.35
CLRN1-203ENST00000328863 FABP6P51161 128 aa12.88□□□□□ -0.35
CLRN1-203ENST00000328863 FXYD6P3P58550 94 aa12.88□□□□□ -0.35
CLRN1-203ENST00000328863 GALK2Q01415 458 aa12.88□□□□□ -0.35
CLRN1-203ENST00000328863 PIGFQ07326 219 aa12.88□□□□□ -0.35
CLRN1-203ENST00000328863 RFX4Q33E94 735 aa12.88□□□□□ -0.35
CLRN1-203ENST00000328863 Q5PR19 223 aa12.88□□□□□ -0.35
CLRN1-203ENST00000328863 SHEQ5VZ18 495 aa12.88□□□□□ -0.35
CLRN1-203ENST00000328863 SLC25A47Q6Q0C1 308 aa12.88□□□□□ -0.35
CLRN1-203ENST00000328863 MYPOPQ86VE0 399 aaPredicted RBP12.88□□□□□ -0.35
CLRN1-203ENST00000328863 SKA3Q8IX90 412 aa12.88□□□□□ -0.35
CLRN1-203ENST00000328863 CLDN22Q8N7P3 220 aa12.88□□□□□ -0.35
CLRN1-203ENST00000328863 NUP37Q8NFH4 326 aa12.88□□□□□ -0.35
CLRN1-203ENST00000328863 OR10G2Q8NGC3 310 aa12.88□□□□□ -0.35
CLRN1-203ENST00000328863 TRMT61AQ96FX7 289 aaKnown RBP12.88□□□□□ -0.35
CLRN1-203ENST00000328863 SH3GL3Q99963 347 aa12.88□□□□□ -0.35
CLRN1-203ENST00000328863 TRAF4Q9BUZ4 470 aaPredicted RBP12.88□□□□□ -0.35
CLRN1-203ENST00000328863 IFT27Q9BW83 186 aa12.88□□□□□ -0.35
CLRN1-203ENST00000328863 GRIP2Q9C0E4 1043 aa12.88□□□□□ -0.35
CLRN1-203ENST00000328863 SEC61A2Q9H9S3 476 aa12.88□□□□□ -0.35
CLRN1-203ENST00000328863 SIAEQ9HAT2 523 aa12.88□□□□□ -0.35
CLRN1-203ENST00000328863 CA10Q9NS85 328 aa12.88□□□□□ -0.35
CLRN1-203ENST00000328863 CBLN4Q9NTU7 201 aa12.88□□□□□ -0.35
CLRN1-203ENST00000328863 TBC1D23Q9NUY8 699 aa12.88□□□□□ -0.35
CLRN1-203ENST00000328863 UGT2A1Q9Y4X1 527 aa12.88□□□□□ -0.35
CLRN1-203ENST00000328863 ARID1AO14497 2285 aa12.87□□□□□ -0.35
CLRN1-203ENST00000328863 IGKV1D-43A0A0B4J1Z2 117 aa12.87□□□□□ -0.35
CLRN1-203ENST00000328863 IGHV2OR16-5A0A0B4J2B6 119 aa12.87□□□□□ -0.35
CLRN1-203ENST00000328863 TCRBV3S1A0A5B6 114 aa12.87□□□□□ -0.35
CLRN1-203ENST00000328863 SLC22A23A1A5C7 686 aa12.87□□□□□ -0.35
CLRN1-203ENST00000328863 IMPA2O14732 288 aa12.87□□□□□ -0.35
CLRN1-203ENST00000328863 CIB2O75838 187 aa12.87□□□□□ -0.35
CLRN1-203ENST00000328863 TXNDC12O95881 172 aa12.87□□□□□ -0.35
CLRN1-203ENST00000328863 PAX1P15863 534 aa12.87□□□□□ -0.35
CLRN1-203ENST00000328863 ZNF14P17017 642 aaPredicted RBP12.87□□□□□ -0.35
CLRN1-203ENST00000328863 MSR1P21757 451 aa12.87□□□□□ -0.35
CLRN1-203ENST00000328863 CALCRP30988 508 aa12.87□□□□□ -0.35
CLRN1-203ENST00000328863 NKX6-1P78426 367 aaPredicted RBP12.87□□□□□ -0.35
CLRN1-203ENST00000328863 CBX1P83916 185 aa12.87□□□□□ -0.35
CLRN1-203ENST00000328863 HSF2Q03933 536 aa12.87□□□□□ -0.35
CLRN1-203ENST00000328863 PLP2Q04941 152 aa12.87□□□□□ -0.35
CLRN1-203ENST00000328863 SNTB2Q13425 540 aaKnown RBP12.87□□□□□ -0.35
CLRN1-203ENST00000328863 MICAQ29983 383 aa12.87□□□□□ -0.35
CLRN1-203ENST00000328863 C1orf146Q5VVC0 180 aa12.87□□□□□ -0.35
CLRN1-203ENST00000328863 CCDC121Q6ZUS5 278 aa12.87□□□□□ -0.35
CLRN1-203ENST00000328863 FOXL2NBQ6ZUU3 175 aa12.87□□□□□ -0.35
CLRN1-203ENST00000328863 LRRC18Q8N456 261 aa12.87□□□□□ -0.35
CLRN1-203ENST00000328863 HTRA1Q92743 480 aa12.87□□□□□ -0.35
CLRN1-203ENST00000328863 NABP1Q96AH0 204 aa12.87□□□□□ -0.35
CLRN1-203ENST00000328863 ERMAPQ96PL5 475 aaPredicted RBP12.87□□□□□ -0.35
CLRN1-203ENST00000328863 SNX18Q96RF0 628 aa12.87□□□□□ -0.35
CLRN1-203ENST00000328863 SYT4Q9H2B2 425 aa12.87□□□□□ -0.35
CLRN1-203ENST00000328863 ZNF442Q9H7R0 627 aa12.87□□□□□ -0.35
CLRN1-203ENST00000328863 VNN3Q9NY84 501 aa12.87□□□□□ -0.35
CLRN1-203ENST00000328863 VSX1Q9NZR4 365 aaPredicted RBP12.87□□□□□ -0.35
CLRN1-203ENST00000328863 SPEF1Q9Y4P9 236 aa12.87□□□□□ -0.35
CLRN1-203ENST00000328863 IER3IP1Q9Y5U9 82 aa12.87□□□□□ -0.35
CLRN1-203ENST00000328863 IQCMA0A1B0GVH7 501 aa12.86□□□□□ -0.35
CLRN1-203ENST00000328863 VSTM5A8MXK1 200 aa12.86□□□□□ -0.35
CLRN1-203ENST00000328863 ARPC3O15145 178 aa12.86□□□□□ -0.35
CLRN1-203ENST00000328863 FKBP6O75344 327 aa12.86□□□□□ -0.35
CLRN1-203ENST00000328863 RENP00797 406 aa12.86□□□□□ -0.35
CLRN1-203ENST00000328863 SERPINA5P05154 406 aa12.86□□□□□ -0.35
CLRN1-203ENST00000328863 APOBEC3AP31941 199 aaPredicted RBP12.86□□□□□ -0.35
CLRN1-203ENST00000328863 CDAP32320 146 aa12.86□□□□□ -0.35
CLRN1-203ENST00000328863 CDKN1AP38936 164 aa12.86□□□□□ -0.35
CLRN1-203ENST00000328863 ATP5J2P56134 94 aa12.86□□□□□ -0.35
CLRN1-203ENST00000328863 PCBD1P61457 104 aa12.86□□□□□ -0.35
CLRN1-203ENST00000328863 RPS23P62266 143 aaKnown RBP12.86□□□□□ -0.35
CLRN1-203ENST00000328863 SNRPD2P62316 118 aaKnown RBP12.86□□□□□ -0.35
CLRN1-203ENST00000328863 PPP1R8Q12972 351 aaKnown RBP12.86□□□□□ -0.35
CLRN1-203ENST00000328863 ETFDHQ16134 617 aa12.86□□□□□ -0.35
CLRN1-203ENST00000328863 SGCAQ16586 387 aa12.86□□□□□ -0.35
CLRN1-203ENST00000328863 TBC1D28Q2M2D7 210 aa12.86□□□□□ -0.35
CLRN1-203ENST00000328863 ZNF770Q6IQ21 691 aaPredicted RBP12.86□□□□□ -0.35
CLRN1-203ENST00000328863 RASSF6Q6ZTQ3 369 aa12.86□□□□□ -0.35
CLRN1-203ENST00000328863 MS4A3Q96HJ5 214 aa12.86□□□□□ -0.35
CLRN1-203ENST00000328863 SAMD8Q96LT4 415 aa12.86□□□□□ -0.35
CLRN1-203ENST00000328863 DGCR6LQ9BY27 220 aa12.86□□□□□ -0.35
CLRN1-203ENST00000328863 CDH20Q9HBT6 801 aa12.86□□□□□ -0.35
CLRN1-203ENST00000328863 ZNF701Q9NV72 531 aaPredicted RBP12.86□□□□□ -0.35
CLRN1-203ENST00000328863 C12orf71A8MTZ7 269 aa12.85□□□□□ -0.35
CLRN1-203ENST00000328863 IDH3BO43837 385 aa12.85□□□□□ -0.35
CLRN1-203ENST00000328863 DEAF1O75398 565 aaPredicted RBP12.85□□□□□ -0.35
CLRN1-203ENST00000328863 KHDRBS3O75525 346 aaKnown RBP12.85□□□□□ -0.35
CLRN1-203ENST00000328863 CST2P09228 141 aa12.85□□□□□ -0.35
CLRN1-203ENST00000328863 PATE4P0C8F1 98 aa12.85□□□□□ -0.35
CLRN1-203ENST00000328863 CTLA4P16410 223 aa12.85□□□□□ -0.35
CLRN1-203ENST00000328863 CRABP1P29762 137 aa12.85□□□□□ -0.35
CLRN1-203ENST00000328863 ARHGDIAP52565 204 aa12.85□□□□□ -0.35
CLRN1-203ENST00000328863 DAG1Q14118 895 aa12.85□□□□□ -0.35
CLRN1-203ENST00000328863 RAB39AQ14964 217 aa12.85□□□□□ -0.35
CLRN1-203ENST00000328863 CLEC12AQ5QGZ9 265 aa12.85□□□□□ -0.35
CLRN1-203ENST00000328863 FAM27BQ5VT28 67 aa12.85□□□□□ -0.35
CLRN1-203ENST00000328863 LEG1Q6P5S2 330 aa12.85□□□□□ -0.35
CLRN1-203ENST00000328863 VHLLQ6RSH7 139 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms