RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 CLLU1Q5K131 121 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 ZNF362Q5T0B9 420 aaPredicted RBP3.7□□□□□ -1.82
USH2A-201ENST00000307340 PGBD2Q6P3X8 592 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 PPP1R3BQ86XI6 285 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 PERPQ96FX8 193 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 CTRCQ99895 268 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 GLIS2Q9BZE0 524 aaPredicted RBP3.7□□□□□ -1.82
USH2A-201ENST00000307340 LAT2Q9GZY6 243 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 NKX1-2Q9UD57 310 aaPredicted RBP3.7□□□□□ -1.82
USH2A-201ENST00000307340 ZAR1LA6NP61 321 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 SOX1O00570 391 aaPredicted RBP3.7□□□□□ -1.82
USH2A-201ENST00000307340 KHNYNO15037 678 aaKnown RBP3.7□□□□□ -1.82
USH2A-201ENST00000307340 CT45A10P0DMU9 189 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 ITGB8P26012 769 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 RPS25P62851 125 aaKnown RBP3.7□□□□□ -1.82
USH2A-201ENST00000307340 DUSP5Q16690 384 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 LRRC73Q5JTD7 316 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 PLPP4Q5VZY2 271 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 CDHR3Q6ZTQ4 885 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 TMED4Q7Z7H5 227 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 LRRN4CLQ8ND94 238 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 CSF3RQ99062 836 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 TEX101Q9BY14 249 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 ZBTB20Q9HC78 741 aaPredicted RBP3.7□□□□□ -1.82
USH2A-201ENST00000307340 SEMA4FO95754 770 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 MT-CO1P00395 513 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 RRASP10301 218 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 COX5BP10606 129 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 DPP4P27487 766 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 LSM6P62312 80 aaKnown RBP3.7□□□□□ -1.82
USH2A-201ENST00000307340 GAB1Q13480 694 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 CEACAM7Q14002 265 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 AVPI1Q5T686 147 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 Q6ZVU0 165 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 OR1M1Q8NGA1 313 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 OR11L1Q8NGX0 322 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 NT5CQ8TCD5 201 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 GPR87Q9BY21 358 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 NMES1Q9C002 83 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 TMEM269A0A1B0GVZ9 245 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 ZNF587BE7ETH6 402 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 ADPRMQ3LIE5 342 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 FAM156AQ8NDB6 213 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 SMPDL3BQ92485 455 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 DCBLD2Q96PD2 775 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 ATP5SQ99766 215 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 MRPS18AQ9NVS2 196 aaKnown RBP3.7□□□□□ -1.82
USH2A-201ENST00000307340 FCF1Q9Y324 198 aaKnown RBP3.7□□□□□ -1.82
USH2A-201ENST00000307340 SERINC4A6NH21 518 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 M0R296 226 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 ACOT8O14734 319 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 PTBP3O95758 552 aaKnown RBP3.7□□□□□ -1.82
USH2A-201ENST00000307340 TBC1D28Q2M2D7 210 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 NKAIN1Q4KMZ8 207 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 H1FNTQ75WM6 255 aaPredicted RBP3.7□□□□□ -1.82
USH2A-201ENST00000307340 CTU1Q7Z7A3 348 aaKnown RBP3.7□□□□□ -1.82
USH2A-201ENST00000307340 CREB3L4Q8TEY5 395 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 TMEM185BQ9H7F4 350 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 ERVK13-1Q9NX77 482 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 EXOGQ9Y2C4 368 aaKnown RBP3.7□□□□□ -1.82
USH2A-201ENST00000307340 TRBV9A0A0B4J1U6 114 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 C2orf78A6NCI8 922 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 SPDEFO95238 335 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 CTSLP07711 333 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 CHRNB1P11230 501 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 GDI1P31150 447 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 RPS19P39019 145 aaKnown RBP3.7□□□□□ -1.82
USH2A-201ENST00000307340 NPY4RP50391 375 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 ERVS71-1P61550 626 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 GDF6Q6KF10 455 aaPredicted RBP3.7□□□□□ -1.82
USH2A-201ENST00000307340 SUSD1Q6UWL2 747 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 CLIP4Q8N3C7 705 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 EXD3Q8N9H8 876 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 TAF9BQ9HBM6 251 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 ACOXLQ9NUZ1 547 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 FZD1Q9UP38 647 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 SIX3O95343 332 aaPredicted RBP3.69□□□□□ -1.82
USH2A-201ENST00000307340 T-ENOLP0DO92 83 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 TNFRSF1AP19438 455 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 CSN1S1P47710 185 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 FUT6P51993 359 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 BEX3Q00994 111 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 FUT7Q11130 342 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 HAGHQ16775 308 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 LIPNQ5VXI9 398 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 RAB24Q969Q5 203 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 CYP8B1Q9UNU6 501 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 PCDHGA6Q9Y5G7 932 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 GABRR3A8MPY1 467 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 LGALS8O00214 317 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 WNT7BP56706 349 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 HIST1H3AP68431 136 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 ZNF766Q5HY98 468 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 MRPL52Q86TS9 123 aaKnown RBP3.69□□□□□ -1.82
USH2A-201ENST00000307340 FAM124AQ86V42 546 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 WFIKKN1Q96NZ8 548 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 CDH20Q9HBT6 801 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 MMP26Q9NRE1 261 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 GABREP78334 506 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 NR0B2Q15466 257 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms