RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 MCHR2Q969V1 340 aa10.01□□□□□ -0.81
VMP1-207ENST00000588131 RNF166Q96A37 237 aaPredicted RBP10.01□□□□□ -0.81
VMP1-207ENST00000588131 RBP7Q96R05 134 aa10.01□□□□□ -0.81
VMP1-207ENST00000588131 CNN2Q99439 309 aaKnown RBP10.01□□□□□ -0.81
VMP1-207ENST00000588131 GLTPQ9NZD2 209 aa10.01□□□□□ -0.81
VMP1-207ENST00000588131 EMC3Q9P0I2 261 aa10.01□□□□□ -0.81
VMP1-207ENST00000588131 FOXD3Q9UJU5 478 aaPredicted RBP10.01□□□□□ -0.81
VMP1-207ENST00000588131 DIMT1Q9UNQ2 313 aaKnown RBP10.01□□□□□ -0.81
VMP1-207ENST00000588131 NOSIPQ9Y314 301 aaKnown RBP10.01□□□□□ -0.81
VMP1-207ENST00000588131 SNX5Q9Y5X3 404 aa10.01□□□□□ -0.81
VMP1-207ENST00000588131 IRGMA1A4Y4 181 aa10□□□□□ -0.81
VMP1-207ENST00000588131 TTLL8A6PVC2 850 aa10□□□□□ -0.81
VMP1-207ENST00000588131 MRPS14O60783 128 aaKnown RBP10□□□□□ -0.81
VMP1-207ENST00000588131 SS18L1O75177 396 aaPredicted RBP10□□□□□ -0.81
VMP1-207ENST00000588131 SLC43A1O75387 559 aa10□□□□□ -0.81
VMP1-207ENST00000588131 MPZL1O95297 269 aa10□□□□□ -0.81
VMP1-207ENST00000588131 IGHA1P01876 353 aa10□□□□□ -0.81
VMP1-207ENST00000588131 TFAP2AP05549 437 aa10□□□□□ -0.81
VMP1-207ENST00000588131 YES1P07947 543 aa10□□□□□ -0.81
VMP1-207ENST00000588131 GAAP10253 952 aa10□□□□□ -0.81
VMP1-207ENST00000588131 FCGR2AP12318 317 aa10□□□□□ -0.81
VMP1-207ENST00000588131 ABOP16442 354 aa10□□□□□ -0.81
VMP1-207ENST00000588131 PCMT1P22061 227 aa10□□□□□ -0.81
VMP1-207ENST00000588131 AGTR1P30556 359 aa10□□□□□ -0.81
VMP1-207ENST00000588131 ATP6V1E1P36543 226 aa10□□□□□ -0.81
VMP1-207ENST00000588131 ZNF133P52736 654 aaPredicted RBP10□□□□□ -0.81
VMP1-207ENST00000588131 HCCSP53701 268 aa10□□□□□ -0.81
VMP1-207ENST00000588131 TUBA4AP68366 448 aa10□□□□□ -0.81
VMP1-207ENST00000588131 EMX1Q04741 257 aaPredicted RBP10□□□□□ -0.81
VMP1-207ENST00000588131 BLMHQ13867 455 aa10□□□□□ -0.81
VMP1-207ENST00000588131 DOC2BQ14184 412 aa10□□□□□ -0.81
VMP1-207ENST00000588131 MEP1BQ16820 701 aa10□□□□□ -0.81
VMP1-207ENST00000588131 ST3GAL2Q16842 350 aa10□□□□□ -0.81
VMP1-207ENST00000588131 THEM4Q5T1C6 240 aa10□□□□□ -0.81
VMP1-207ENST00000588131 C1orf185Q5T7R7 199 aa10□□□□□ -0.81
VMP1-207ENST00000588131 NSUN5P2Q63ZY6 315 aa10□□□□□ -0.81
VMP1-207ENST00000588131 DNM1P34Q6PK57 102 aa10□□□□□ -0.81
VMP1-207ENST00000588131 GFRALQ6UXV0 394 aa10□□□□□ -0.81
VMP1-207ENST00000588131 SEM1Q6ZVN7 128 aa10□□□□□ -0.81
VMP1-207ENST00000588131 KCTD8Q6ZWB6 473 aa10□□□□□ -0.81
VMP1-207ENST00000588131 LINGO2Q7L985 606 aa10□□□□□ -0.81
VMP1-207ENST00000588131 TIGD4Q8IY51 512 aa10□□□□□ -0.81
VMP1-207ENST00000588131 RPRMLQ8N4K4 120 aa10□□□□□ -0.81
VMP1-207ENST00000588131 RFLNBQ8N5W9 214 aa10□□□□□ -0.81
VMP1-207ENST00000588131 TBX5Q99593 518 aa10□□□□□ -0.81
VMP1-207ENST00000588131 ZNF649Q9BS31 505 aa10□□□□□ -0.81
VMP1-207ENST00000588131 CDCA4Q9BXL8 241 aa10□□□□□ -0.81
VMP1-207ENST00000588131 WDR76Q9H967 626 aa10□□□□□ -0.81
VMP1-207ENST00000588131 MARCH7Q9H992 704 aa10□□□□□ -0.81
VMP1-207ENST00000588131 MRPL22Q9NWU5 206 aaKnown RBP10□□□□□ -0.81
VMP1-207ENST00000588131 CLEC2DQ9UHP7 191 aa10□□□□□ -0.81
VMP1-207ENST00000588131 UGT2A1Q9Y4X1 527 aa10□□□□□ -0.81
VMP1-207ENST00000588131 FAM215AQ9Y5M1 114 aa10□□□□□ -0.81
VMP1-207ENST00000588131 PKD1L2Q7Z442 2459 aa9.99□□□□□ -0.81
VMP1-207ENST00000588131 A0A1W2PPL8 197 aa9.99□□□□□ -0.81
VMP1-207ENST00000588131 CD8B2A6NJW9 211 aa9.99□□□□□ -0.81
VMP1-207ENST00000588131 C12orf71A8MTZ7 269 aa9.99□□□□□ -0.81
VMP1-207ENST00000588131 WDR1O75083 606 aa9.99□□□□□ -0.81
VMP1-207ENST00000588131 MRPL33O75394 65 aaKnown RBP9.99□□□□□ -0.81
VMP1-207ENST00000588131 CLPTM1O96005 669 aa9.99□□□□□ -0.81
VMP1-207ENST00000588131 PTHP01270 115 aa9.99□□□□□ -0.81
VMP1-207ENST00000588131 IGHV3-9P01782 118 aa9.99□□□□□ -0.81
VMP1-207ENST00000588131 HLA-DQA2P01906 255 aa9.99□□□□□ -0.81
VMP1-207ENST00000588131 SCG5P05408 212 aa9.99□□□□□ -0.81
VMP1-207ENST00000588131 LIMS3P0CW19 117 aa9.99□□□□□ -0.81
VMP1-207ENST00000588131 LIMS4P0CW20 117 aa9.99□□□□□ -0.81
VMP1-207ENST00000588131 DCKP27707 260 aa9.99□□□□□ -0.81
VMP1-207ENST00000588131 CD79BP40259 229 aa9.99□□□□□ -0.81
VMP1-207ENST00000588131 RPS27P42677 84 aaKnown RBP9.99□□□□□ -0.81
VMP1-207ENST00000588131 ETV1P50549 477 aa9.99□□□□□ -0.81
VMP1-207ENST00000588131 POU4F2Q12837 409 aa9.99□□□□□ -0.81
VMP1-207ENST00000588131 GUSBP1Q15486 140 aa9.99□□□□□ -0.81
VMP1-207ENST00000588131 NEDD8Q15843 81 aa9.99□□□□□ -0.81
VMP1-207ENST00000588131 C10orf128Q5T292 105 aa9.99□□□□□ -0.81
VMP1-207ENST00000588131 TSPO2Q5TGU0 170 aa9.99□□□□□ -0.81
VMP1-207ENST00000588131 XAF1Q6GPH4 301 aa9.99□□□□□ -0.81
VMP1-207ENST00000588131 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.99□□□□□ -0.81
VMP1-207ENST00000588131 ERI1Q8IV48 349 aaKnown RBP9.99□□□□□ -0.81
VMP1-207ENST00000588131 SLC35F2Q8IXU6 374 aa9.99□□□□□ -0.81
VMP1-207ENST00000588131 GCNT2Q8N0V5 402 aa9.99□□□□□ -0.81
VMP1-207ENST00000588131 POMGNT2Q8NAT1 580 aa9.99□□□□□ -0.81
VMP1-207ENST00000588131 SLC26A10Q8NG04 563 aa9.99□□□□□ -0.81
VMP1-207ENST00000588131 OR10H4Q8NGA5 316 aa9.99□□□□□ -0.81
VMP1-207ENST00000588131 FNDC8Q8TC99 324 aa9.99□□□□□ -0.81
VMP1-207ENST00000588131 HTRA1Q92743 480 aa9.99□□□□□ -0.81
VMP1-207ENST00000588131 WNT2BQ93097 391 aa9.99□□□□□ -0.81
VMP1-207ENST00000588131 INTS12Q96CB8 462 aaKnown RBP9.99□□□□□ -0.81
VMP1-207ENST00000588131 ZNF837Q96EG3 531 aaPredicted RBP9.99□□□□□ -0.81
VMP1-207ENST00000588131 GMPPAQ96IJ6 420 aaPredicted RBP9.99□□□□□ -0.81
VMP1-207ENST00000588131 ALKBH3Q96Q83 286 aaPredicted RBP9.99□□□□□ -0.81
VMP1-207ENST00000588131 JAM3Q9BX67 310 aa9.99□□□□□ -0.81
VMP1-207ENST00000588131 ULBP2Q9BZM5 246 aa9.99□□□□□ -0.81
VMP1-207ENST00000588131 GP6Q9HCN6 339 aa9.99□□□□□ -0.81
VMP1-207ENST00000588131 ACOT13Q9NPJ3 140 aa9.99□□□□□ -0.81
VMP1-207ENST00000588131 RALYQ9UKM9 306 aaKnown RBP9.99□□□□□ -0.81
VMP1-207ENST00000588131 COPS3Q9UNS2 423 aa9.99□□□□□ -0.81
VMP1-207ENST00000588131 KLHDC2Q9Y2U9 406 aa9.99□□□□□ -0.81
VMP1-207ENST00000588131 PCDHGB1Q9Y5G3 927 aa9.99□□□□□ -0.81
VMP1-207ENST00000588131 CHD6Q8TD26 2715 aa9.99□□□□□ -0.81
VMP1-207ENST00000588131 ACACBO00763 2458 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms