RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 TGFBIQ15582 683 aa4.23□□□□□ -1.73
SMG1-204ENST00000561940 ARMC12Q5T9G4 340 aa4.23□□□□□ -1.73
SMG1-204ENST00000561940 LCN12Q6JVE5 192 aa4.23□□□□□ -1.73
SMG1-204ENST00000561940 CNIH2Q6PI25 160 aa4.23□□□□□ -1.73
SMG1-204ENST00000561940 Q8N7P7 452 aa4.23□□□□□ -1.73
SMG1-204ENST00000561940 ZNF557Q8N988 423 aaPredicted RBP4.23□□□□□ -1.73
SMG1-204ENST00000561940 MED8Q96G25 268 aa4.23□□□□□ -1.73
SMG1-204ENST00000561940 RARRES2Q99969 163 aa4.23□□□□□ -1.73
SMG1-204ENST00000561940 MFFQ9GZY8 342 aa4.23□□□□□ -1.73
SMG1-204ENST00000561940 EML4Q9HC35 981 aaKnown RBP4.23□□□□□ -1.73
SMG1-204ENST00000561940 IL26Q9NPH9 171 aa4.23□□□□□ -1.73
SMG1-204ENST00000561940 NEU3Q9UQ49 428 aa4.23□□□□□ -1.73
SMG1-204ENST00000561940 MYOM1P52179 1685 aa4.22□□□□□ -1.73
SMG1-204ENST00000561940 RREB1Q92766 1687 aa4.22□□□□□ -1.73
SMG1-204ENST00000561940 HFM1A2PYH4 1435 aa4.22□□□□□ -1.73
SMG1-204ENST00000561940 TNS1Q9HBL0 1735 aaKnown RBP4.22□□□□□ -1.73
SMG1-204ENST00000561940 C12orf71A8MTZ7 269 aa4.22□□□□□ -1.73
SMG1-204ENST00000561940 ERVV-1B6SEH8 477 aa4.22□□□□□ -1.73
SMG1-204ENST00000561940 PPP1R2P9O14990 202 aa4.22□□□□□ -1.73
SMG1-204ENST00000561940 ZNF43P17038 809 aa4.22□□□□□ -1.73
SMG1-204ENST00000561940 TNNI1P19237 187 aa4.22□□□□□ -1.73
SMG1-204ENST00000561940 TCN1P20061 433 aaPredicted RBP4.22□□□□□ -1.73
SMG1-204ENST00000561940 CMA1P23946 247 aa4.22□□□□□ -1.73
SMG1-204ENST00000561940 CCNE1P24864 410 aa4.22□□□□□ -1.73
SMG1-204ENST00000561940 FBXW4P57775 412 aa4.22□□□□□ -1.73
SMG1-204ENST00000561940 ERVK-25P63136 954 aa4.22□□□□□ -1.73
SMG1-204ENST00000561940 C6orf89Q6UWU4 347 aa4.22□□□□□ -1.73
SMG1-204ENST00000561940 ZNF836Q6ZNA1 936 aa4.22□□□□□ -1.73
SMG1-204ENST00000561940 Q6ZSR3 168 aa4.22□□□□□ -1.73
SMG1-204ENST00000561940 MS4A15Q8N5U1 240 aa4.22□□□□□ -1.73
SMG1-204ENST00000561940 OR2G2Q8NGZ5 317 aa4.22□□□□□ -1.73
SMG1-204ENST00000561940 ACER1Q8TDN7 264 aa4.22□□□□□ -1.73
SMG1-204ENST00000561940 TET2Q6N021 2002 aaPredicted RBP4.22□□□□□ -1.73
SMG1-204ENST00000561940 CASZ1Q86V15 1759 aa4.22□□□□□ -1.73
SMG1-204ENST00000561940 BCL9O00512 1426 aa4.21□□□□□ -1.73
SMG1-204ENST00000561940 ERBINQ96RT1 1412 aa4.21□□□□□ -1.73
SMG1-204ENST00000561940 DUOX2Q9NRD8 1548 aa4.21□□□□□ -1.73
SMG1-204ENST00000561940 USP32Q8NFA0 1604 aa4.21□□□□□ -1.73
SMG1-204ENST00000561940 EIF2AK4Q9P2K8 1649 aaKnown RBP4.21□□□□□ -1.73
SMG1-204ENST00000561940 NWD2Q9ULI1 1742 aa4.21□□□□□ -1.73
SMG1-204ENST00000561940 ZNFX1Q9P2E3 1918 aaKnown RBP4.21□□□□□ -1.74
SMG1-204ENST00000561940 IGKV1D-13A0A0B4J2D9 117 aa4.21□□□□□ -1.74
SMG1-204ENST00000561940 ALDOBP05062 364 aa4.21□□□□□ -1.74
SMG1-204ENST00000561940 IGKV1-13P0DP09 117 aa4.21□□□□□ -1.74
SMG1-204ENST00000561940 XKR7Q5GH72 579 aa4.21□□□□□ -1.74
SMG1-204ENST00000561940 LRRC66Q68CR7 880 aa4.21□□□□□ -1.74
SMG1-204ENST00000561940 SASS6Q6UVJ0 657 aa4.21□□□□□ -1.74
SMG1-204ENST00000561940 LHFPL3Q86UP9 236 aa4.21□□□□□ -1.74
SMG1-204ENST00000561940 ZADH2Q8N4Q0 377 aa4.21□□□□□ -1.74
SMG1-204ENST00000561940 B3GNT7Q8NFL0 401 aa4.21□□□□□ -1.74
SMG1-204ENST00000561940 PLIN2Q99541 437 aa4.21□□□□□ -1.74
SMG1-204ENST00000561940 NRIP2Q9BQI9 281 aa4.21□□□□□ -1.74
SMG1-204ENST00000561940 NANOGQ9H9S0 305 aa4.21□□□□□ -1.74
SMG1-204ENST00000561940 XCL2Q9UBD3 114 aa4.21□□□□□ -1.74
SMG1-204ENST00000561940 RPS6KB2Q9UBS0 482 aa4.21□□□□□ -1.74
SMG1-204ENST00000561940 PRG3Q9Y2Y8 225 aaPredicted RBP4.21□□□□□ -1.74
SMG1-204ENST00000561940 NSD2O96028 1365 aa4.21□□□□□ -1.74
SMG1-204ENST00000561940 CROCC2H7BZ55 1655 aa4.21□□□□□ -1.74
SMG1-204ENST00000561940 MTCL1Q9Y4B5 1905 aaKnown RBP4.21□□□□□ -1.74
SMG1-204ENST00000561940 NUP188Q5SRE5 1749 aa4.21□□□□□ -1.74
SMG1-204ENST00000561940 MARF1Q9Y4F3 1742 aaKnown RBP4.21□□□□□ -1.74
SMG1-204ENST00000561940 MEGF6O75095 1541 aa4.21□□□□□ -1.74
SMG1-204ENST00000561940 CEP162Q5TB80 1403 aa4.21□□□□□ -1.74
SMG1-204ENST00000561940 TNS3Q68CZ2 1445 aa4.21□□□□□ -1.74
SMG1-204ENST00000561940 FANCIQ9NVI1 1328 aa4.21□□□□□ -1.74
SMG1-204ENST00000561940 THSD7AQ9UPZ6 1657 aa4.2□□□□□ -1.74
SMG1-204ENST00000561940 A0A0G2JN53 185 aa4.2□□□□□ -1.74
SMG1-204ENST00000561940 CCDC182A6NF36 153 aa4.2□□□□□ -1.74
SMG1-204ENST00000561940 DFNA5O60443 496 aa4.2□□□□□ -1.74
SMG1-204ENST00000561940 ERLIN2O94905 339 aa4.2□□□□□ -1.74
SMG1-204ENST00000561940 TSPAN13O95857 204 aa4.2□□□□□ -1.74
SMG1-204ENST00000561940 C2P06681 752 aa4.2□□□□□ -1.74
SMG1-204ENST00000561940 RCC1P18754 421 aaPredicted RBP4.2□□□□□ -1.74
SMG1-204ENST00000561940 IFNA8P32881 189 aa4.2□□□□□ -1.74
SMG1-204ENST00000561940 RORAP35398 523 aa4.2□□□□□ -1.74
SMG1-204ENST00000561940 NUDT1P36639 197 aa4.2□□□□□ -1.74
SMG1-204ENST00000561940 HSD17B2P37059 387 aa4.2□□□□□ -1.74
SMG1-204ENST00000561940 SUB1P53999 127 aaKnown RBP eCLIP4.2□□□□□ -1.74
SMG1-204ENST00000561940 CDH6P55285 790 aa4.2□□□□□ -1.74
SMG1-204ENST00000561940 SH3BGRP55822 239 aaPredicted RBP4.2□□□□□ -1.74
SMG1-204ENST00000561940 LRRC10Q5BKY1 277 aa4.2□□□□□ -1.74
SMG1-204ENST00000561940 TTC5Q8N0Z6 440 aa4.2□□□□□ -1.74
SMG1-204ENST00000561940 OR1S2Q8NGQ3 325 aa4.2□□□□□ -1.74
SMG1-204ENST00000561940 KIFAP3Q92845 792 aa4.2□□□□□ -1.74
SMG1-204ENST00000561940 OR2M2Q96R28 347 aa4.2□□□□□ -1.74
SMG1-204ENST00000561940 RANBP3Q9H6Z4 567 aaPredicted RBP4.2□□□□□ -1.74
SMG1-204ENST00000561940 UGT1A7Q9HAW7 530 aa4.2□□□□□ -1.74
SMG1-204ENST00000561940 UGT1A10Q9HAW8 530 aa4.2□□□□□ -1.74
SMG1-204ENST00000561940 UGT1A8Q9HAW9 530 aa4.2□□□□□ -1.74
SMG1-204ENST00000561940 MRPL47Q9HD33 250 aaKnown RBP4.2□□□□□ -1.74
SMG1-204ENST00000561940 ZNF225Q9UK10 706 aa4.2□□□□□ -1.74
SMG1-204ENST00000561940 TRAPPC4Q9Y296 219 aa4.2□□□□□ -1.74
SMG1-204ENST00000561940 OVOS2A0A0G2JMS6 1433 aa4.2□□□□□ -1.74
SMG1-204ENST00000561940 OVOS2A0A0J9YW53 1432 aa4.2□□□□□ -1.74
SMG1-204ENST00000561940 OVOS2Q6IE36 1432 aa4.2□□□□□ -1.74
SMG1-204ENST00000561940 BRD4O60885 1362 aaPredicted RBP4.19□□□□□ -1.74
SMG1-204ENST00000561940 PIKFYVEQ9Y2I7 2098 aa4.19□□□□□ -1.74
SMG1-204ENST00000561940 SGK1O00141 431 aa4.19□□□□□ -1.74
SMG1-204ENST00000561940 FGGP02679 453 aa4.19□□□□□ -1.74
SMG1-204ENST00000561940 IGHV4-34P06331 123 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms