RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 A0A1W2PPW3 197 aa10.26□□□□□ -0.77
HERC1-202ENST00000558324 LRP5LA4QPB2 252 aa10.26□□□□□ -0.77
HERC1-202ENST00000558324 LYNX1G3V0Z9 82 aa10.26□□□□□ -0.77
HERC1-202ENST00000558324 SERPINA1P01009 418 aa10.26□□□□□ -0.77
HERC1-202ENST00000558324 LYNX1P0DP58 116 aa10.26□□□□□ -0.77
HERC1-202ENST00000558324 SAGP10523 405 aaPredicted RBP10.26□□□□□ -0.77
HERC1-202ENST00000558324 NCK1P16333 377 aa10.26□□□□□ -0.77
HERC1-202ENST00000558324 CDAP32320 146 aa10.26□□□□□ -0.77
HERC1-202ENST00000558324 GLRXP35754 106 aa10.26□□□□□ -0.77
HERC1-202ENST00000558324 GSK3BP49841 420 aa10.26□□□□□ -0.77
HERC1-202ENST00000558324 GZMKP49863 264 aa10.26□□□□□ -0.77
HERC1-202ENST00000558324 RPS23P62266 143 aaKnown RBP10.26□□□□□ -0.77
HERC1-202ENST00000558324 HIST3H3Q16695 136 aa10.26□□□□□ -0.77
HERC1-202ENST00000558324 ALKBH6Q3KRA9 238 aa10.26□□□□□ -0.77
HERC1-202ENST00000558324 SLC36A2Q495M3 483 aa10.26□□□□□ -0.77
HERC1-202ENST00000558324 IFI44LQ53G44 452 aa10.26□□□□□ -0.77
HERC1-202ENST00000558324 ARMC4Q5T2S8 1044 aa10.26□□□□□ -0.77
HERC1-202ENST00000558324 FKBP9P1Q75LS8 142 aa10.26□□□□□ -0.77
HERC1-202ENST00000558324 NRMQ8IXM6 262 aa10.26□□□□□ -0.77
HERC1-202ENST00000558324 OFCC1Q8IZS5 231 aa10.26□□□□□ -0.77
HERC1-202ENST00000558324 CLDN22Q8N7P3 220 aa10.26□□□□□ -0.77
HERC1-202ENST00000558324 ICA1LQ8NDH6 482 aa10.26□□□□□ -0.77
HERC1-202ENST00000558324 RBM15BQ8NDT2 890 aaKnown RBP10.26□□□□□ -0.77
HERC1-202ENST00000558324 NEU4Q8WWR8 484 aaPredicted RBP10.26□□□□□ -0.77
HERC1-202ENST00000558324 GEMIN6Q8WXD5 167 aaKnown RBP10.26□□□□□ -0.77
HERC1-202ENST00000558324 NSMAFQ92636 917 aa10.26□□□□□ -0.77
HERC1-202ENST00000558324 FAM162AQ96A26 154 aa10.26□□□□□ -0.77
HERC1-202ENST00000558324 HSH2DQ96JZ2 352 aa10.26□□□□□ -0.77
HERC1-202ENST00000558324 ELAC2Q9BQ52 826 aaKnown RBP10.26□□□□□ -0.77
HERC1-202ENST00000558324 MRPL13Q9BYD1 178 aaKnown RBP10.26□□□□□ -0.77
HERC1-202ENST00000558324 EFCAB1Q9HAE3 211 aa10.26□□□□□ -0.77
HERC1-202ENST00000558324 CDH20Q9HBT6 801 aa10.26□□□□□ -0.77
HERC1-202ENST00000558324 MAN2C1Q9NTJ4 1040 aa10.26□□□□□ -0.77
HERC1-202ENST00000558324 REV1Q9UBZ9 1251 aa10.26□□□□□ -0.77
HERC1-202ENST00000558324 AP3M1Q9Y2T2 418 aa10.26□□□□□ -0.77
HERC1-202ENST00000558324 ARFGEF3Q5TH69 2177 aa10.26□□□□□ -0.77
HERC1-202ENST00000558324 CHD3Q12873 2000 aaKnown RBP10.25□□□□□ -0.77
HERC1-202ENST00000558324 IGKV1D-43A0A0B4J1Z2 117 aa10.25□□□□□ -0.77
HERC1-202ENST00000558324 LOC100289279A0A1B0GTE1 492 aa10.25□□□□□ -0.77
HERC1-202ENST00000558324 EFCAB9A8MZ26 197 aa10.25□□□□□ -0.77
HERC1-202ENST00000558324 FFAR1O14842 300 aa10.25□□□□□ -0.77
HERC1-202ENST00000558324 SYNGR3O43761 229 aa10.25□□□□□ -0.77
HERC1-202ENST00000558324 STAMBPO95630 424 aa10.25□□□□□ -0.77
HERC1-202ENST00000558324 IGF2P01344 180 aa10.25□□□□□ -0.77
HERC1-202ENST00000558324 MAKP20794 623 aa10.25□□□□□ -0.77
HERC1-202ENST00000558324 GPR4P46093 362 aa10.25□□□□□ -0.77
HERC1-202ENST00000558324 SEC24CP53992 1094 aa10.25□□□□□ -0.77
HERC1-202ENST00000558324 ERVS71-1P61550 626 aa10.25□□□□□ -0.77
HERC1-202ENST00000558324 HSF2Q03933 536 aa10.25□□□□□ -0.77
HERC1-202ENST00000558324 TRAM2Q15035 370 aa10.25□□□□□ -0.77
HERC1-202ENST00000558324 SGCAQ16586 387 aa10.25□□□□□ -0.77
HERC1-202ENST00000558324 FXNQ16595 210 aa10.25□□□□□ -0.77
HERC1-202ENST00000558324 TBC1D28Q2M2D7 210 aa10.25□□□□□ -0.77
HERC1-202ENST00000558324 ZNF730Q6ZMV8 503 aa10.25□□□□□ -0.77
HERC1-202ENST00000558324 IL17RELQ6ZVW7 336 aa10.25□□□□□ -0.77
HERC1-202ENST00000558324 ARIH2OSQ8N7S6 290 aa10.25□□□□□ -0.77
HERC1-202ENST00000558324 OR13C2Q8NGS9 318 aa10.25□□□□□ -0.77
HERC1-202ENST00000558324 OR51A7Q8NH64 312 aa10.25□□□□□ -0.77
HERC1-202ENST00000558324 UBASH3BQ8TF42 649 aa10.25□□□□□ -0.77
HERC1-202ENST00000558324 LIPHQ8WWY8 451 aa10.25□□□□□ -0.77
HERC1-202ENST00000558324 MSI2Q96DH6 328 aaKnown RBP10.25□□□□□ -0.77
HERC1-202ENST00000558324 SNX18Q96RF0 628 aa10.25□□□□□ -0.77
HERC1-202ENST00000558324 SEPHS2Q99611 448 aa10.25□□□□□ -0.77
HERC1-202ENST00000558324 HOPXQ9BPY8 73 aaPredicted RBP10.25□□□□□ -0.77
HERC1-202ENST00000558324 KCTD14Q9BQ13 255 aaPredicted RBP10.25□□□□□ -0.77
HERC1-202ENST00000558324 TXNIPQ9H3M7 391 aa10.25□□□□□ -0.77
HERC1-202ENST00000558324 HIF3AQ9Y2N7 669 aa10.25□□□□□ -0.77
HERC1-202ENST00000558324 UGT2A1Q9Y4X1 527 aa10.25□□□□□ -0.77
HERC1-202ENST00000558324 ABCA1O95477 2261 aa10.24□□□□□ -0.77
HERC1-202ENST00000558324 SONP18583 2426 aaKnown RBP10.24□□□□□ -0.77
HERC1-202ENST00000558324 JMJD1CQ15652 2540 aa10.24□□□□□ -0.77
HERC1-202ENST00000558324 IQCMA0A1B0GVH7 501 aa10.24□□□□□ -0.77
HERC1-202ENST00000558324 CENPBD1B2RD01 187 aa10.24□□□□□ -0.77
HERC1-202ENST00000558324 LMX1BO60663 402 aa10.24□□□□□ -0.77
HERC1-202ENST00000558324 LCKP06239 509 aa10.24□□□□□ -0.77
HERC1-202ENST00000558324 TSPAN19P0C672 248 aa10.24□□□□□ -0.77
HERC1-202ENST00000558324 NAT2P11245 290 aa10.24□□□□□ -0.77
HERC1-202ENST00000558324 ZNF23P17027 643 aa10.24□□□□□ -0.77
HERC1-202ENST00000558324 CCNOP22674 350 aa10.24□□□□□ -0.77
HERC1-202ENST00000558324 IGFBP5P24593 272 aa10.24□□□□□ -0.77
HERC1-202ENST00000558324 APEX1P27695 318 aaKnown RBP10.24□□□□□ -0.77
HERC1-202ENST00000558324 CTXN1P60606 82 aa10.24□□□□□ -0.77
HERC1-202ENST00000558324 PSME3P61289 254 aa10.24□□□□□ -0.77
HERC1-202ENST00000558324 PLP2Q04941 152 aa10.24□□□□□ -0.77
HERC1-202ENST00000558324 NKPD1Q17RQ9 610 aa10.24□□□□□ -0.77
HERC1-202ENST00000558324 PABPC1L2AQ5JQF8 200 aa10.24□□□□□ -0.77
HERC1-202ENST00000558324 C10orf128Q5T292 105 aa10.24□□□□□ -0.77
HERC1-202ENST00000558324 FAM166AQ6J272 317 aa10.24□□□□□ -0.77
HERC1-202ENST00000558324 RGS7BPQ6MZT1 257 aaPredicted RBP10.24□□□□□ -0.77
HERC1-202ENST00000558324 C8orf82Q6P1X6 216 aaPredicted RBP10.24□□□□□ -0.77
HERC1-202ENST00000558324 TBPL2Q6SJ96 375 aa10.24□□□□□ -0.77
HERC1-202ENST00000558324 CBLL1Q75N03 491 aa10.24□□□□□ -0.77
HERC1-202ENST00000558324 DPPA2Q7Z7J5 298 aa10.24□□□□□ -0.77
HERC1-202ENST00000558324 OAFQ86UD1 273 aa10.24□□□□□ -0.77
HERC1-202ENST00000558324 ZNF786Q8N393 782 aa10.24□□□□□ -0.77
HERC1-202ENST00000558324 ZNF540Q8NDQ6 660 aa10.24□□□□□ -0.77
HERC1-202ENST00000558324 SOX7Q9BT81 388 aa10.24□□□□□ -0.77
HERC1-202ENST00000558324 BEX2Q9BXY8 128 aa10.24□□□□□ -0.77
HERC1-202ENST00000558324 SHARPINQ9H0F6 387 aa10.24□□□□□ -0.77
HERC1-202ENST00000558324 KCNN2Q9H2S1 579 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms