RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 IL10RAQ13651 578 aa12.68□□□□□ -0.38
UBE3B-210ENST00000539599 HACD4Q5VWC8 232 aa12.68□□□□□ -0.38
UBE3B-210ENST00000539599 SLC6A19Q695T7 634 aa12.68□□□□□ -0.38
UBE3B-210ENST00000539599 RTN4RL2Q86UN3 420 aa12.68□□□□□ -0.38
UBE3B-210ENST00000539599 C4orf45Q96LM5 186 aa12.68□□□□□ -0.38
UBE3B-210ENST00000539599 TBL1XR1Q9BZK7 514 aa12.68□□□□□ -0.38
UBE3B-210ENST00000539599 SLC19A3Q9BZV2 496 aa12.68□□□□□ -0.38
UBE3B-210ENST00000539599 SYNDIG1Q9H7V2 258 aa12.68□□□□□ -0.38
UBE3B-210ENST00000539599 COPZ2Q9P299 210 aa12.68□□□□□ -0.38
UBE3B-210ENST00000539599 IGKV1D-43A0A0B4J1Z2 117 aa12.68□□□□□ -0.38
UBE3B-210ENST00000539599 RPS10-NUDT3A0A1W2PQS6 291 aa12.68□□□□□ -0.38
UBE3B-210ENST00000539599 I3L521 148 aa12.68□□□□□ -0.38
UBE3B-210ENST00000539599 EIF1AYO14602 144 aaKnown RBP12.68□□□□□ -0.38
UBE3B-210ENST00000539599 CRYZL1O95825 349 aa12.68□□□□□ -0.38
UBE3B-210ENST00000539599 LIPCP11150 499 aa12.68□□□□□ -0.38
UBE3B-210ENST00000539599 IGFBP4P22692 258 aa12.68□□□□□ -0.38
UBE3B-210ENST00000539599 ABCD3P28288 659 aa12.68□□□□□ -0.38
UBE3B-210ENST00000539599 CD38P28907 300 aa12.68□□□□□ -0.38
UBE3B-210ENST00000539599 LCN1P31025 176 aa12.68□□□□□ -0.38
UBE3B-210ENST00000539599 BIKQ13323 160 aa12.68□□□□□ -0.38
UBE3B-210ENST00000539599 ELOCQ15369 112 aa12.68□□□□□ -0.38
UBE3B-210ENST00000539599 DMRTC1Q5HYR2 192 aa12.68□□□□□ -0.38
UBE3B-210ENST00000539599 OMA1Q96E52 524 aa12.68□□□□□ -0.38
UBE3B-210ENST00000539599 ELMOD3Q96FG2 381 aa12.68□□□□□ -0.38
UBE3B-210ENST00000539599 KLHL15Q96M94 604 aa12.68□□□□□ -0.38
UBE3B-210ENST00000539599 GINS4Q9BRT9 223 aa12.68□□□□□ -0.38
UBE3B-210ENST00000539599 ADAM19Q9H013 955 aa12.68□□□□□ -0.38
UBE3B-210ENST00000539599 SLITRK2Q9H156 845 aa12.68□□□□□ -0.38
UBE3B-210ENST00000539599 DCDC2BA2VCK2 349 aa12.67□□□□□ -0.38
UBE3B-210ENST00000539599 TLCD2A6NGC4 264 aa12.67□□□□□ -0.38
UBE3B-210ENST00000539599 XKRYO14609 159 aa12.67□□□□□ -0.38
UBE3B-210ENST00000539599 SUSD5O60279 629 aa12.67□□□□□ -0.38
UBE3B-210ENST00000539599 GLSO94925 669 aaPredicted RBP12.67□□□□□ -0.38
UBE3B-210ENST00000539599 NME1P15531 152 aaKnown RBP12.67□□□□□ -0.38
UBE3B-210ENST00000539599 CSRP1P21291 193 aaKnown RBP12.67□□□□□ -0.38
UBE3B-210ENST00000539599 EIF1AXP47813 144 aaKnown RBP12.67□□□□□ -0.38
UBE3B-210ENST00000539599 ADAM8P78325 824 aa12.67□□□□□ -0.38
UBE3B-210ENST00000539599 HSF2Q03933 536 aa12.67□□□□□ -0.38
UBE3B-210ENST00000539599 DCAF12L2Q5VW00 463 aa12.67□□□□□ -0.38
UBE3B-210ENST00000539599 NDUFAF7Q7L592 441 aa12.67□□□□□ -0.38
UBE3B-210ENST00000539599 FGD2Q7Z6J4 655 aa12.67□□□□□ -0.38
UBE3B-210ENST00000539599 MEIOBQ8N635 442 aa12.67□□□□□ -0.38
UBE3B-210ENST00000539599 OTOSQ8NHW6 89 aa12.67□□□□□ -0.38
UBE3B-210ENST00000539599 ZNF417Q8TAU3 575 aa12.67□□□□□ -0.38
UBE3B-210ENST00000539599 STK35Q8TDR2 534 aa12.67□□□□□ -0.38
UBE3B-210ENST00000539599 ARL5BQ96KC2 179 aa12.67□□□□□ -0.38
UBE3B-210ENST00000539599 ZNF285Q96NJ3 590 aa12.67□□□□□ -0.38
UBE3B-210ENST00000539599 ZNF587Q96SQ5 575 aaPredicted RBP12.67□□□□□ -0.38
UBE3B-210ENST00000539599 LMAN1LQ9HAT1 526 aa12.67□□□□□ -0.38
UBE3B-210ENST00000539599 PLEKHA1Q9HB21 404 aa12.67□□□□□ -0.38
UBE3B-210ENST00000539599 SCP2D1Q9UJQ7 156 aa12.67□□□□□ -0.38
UBE3B-210ENST00000539599 MOKQ9UQ07 419 aa12.67□□□□□ -0.38
UBE3B-210ENST00000539599 RHPN2P1A8MT19 583 aa12.67□□□□□ -0.38
UBE3B-210ENST00000539599 CTAG2O75638 210 aa12.67□□□□□ -0.38
UBE3B-210ENST00000539599 SLC25A12O75746 678 aa12.67□□□□□ -0.38
UBE3B-210ENST00000539599 IFI6P09912 130 aa12.67□□□□□ -0.38
UBE3B-210ENST00000539599 CAPZA2P47755 286 aa12.67□□□□□ -0.38
UBE3B-210ENST00000539599 PSMA6P60900 246 aaKnown RBP12.67□□□□□ -0.38
UBE3B-210ENST00000539599 SKP1P63208 163 aa12.67□□□□□ -0.38
UBE3B-210ENST00000539599 C19orf57Q0VDD7 668 aa12.67□□□□□ -0.38
UBE3B-210ENST00000539599 SERTAD2Q14140 314 aa12.67□□□□□ -0.38
UBE3B-210ENST00000539599 SEZ6L2Q6UXD5 910 aa12.67□□□□□ -0.38
UBE3B-210ENST00000539599 GLDNQ6ZMI3 551 aaPredicted RBP12.67□□□□□ -0.38
UBE3B-210ENST00000539599 ZNF782Q6ZMW2 699 aaPredicted RBP12.67□□□□□ -0.38
UBE3B-210ENST00000539599 SLC38A6Q8IZM9 456 aa12.67□□□□□ -0.38
UBE3B-210ENST00000539599 SLC43A2Q8N370 569 aa12.67□□□□□ -0.38
UBE3B-210ENST00000539599 OR51S1Q8NGJ8 323 aa12.67□□□□□ -0.38
UBE3B-210ENST00000539599 GPR148Q8TDV2 347 aa12.67□□□□□ -0.38
UBE3B-210ENST00000539599 HGDQ93099 445 aa12.67□□□□□ -0.38
UBE3B-210ENST00000539599 SLC46A1Q96NT5 459 aa12.67□□□□□ -0.38
UBE3B-210ENST00000539599 FOXQ1Q9C009 403 aa12.67□□□□□ -0.38
UBE3B-210ENST00000539599 COMMD4Q9H0A8 199 aa12.67□□□□□ -0.38
UBE3B-210ENST00000539599 TAS2R4Q9NYW5 299 aa12.67□□□□□ -0.38
UBE3B-210ENST00000539599 VDAC3Q9Y277 283 aa12.67□□□□□ -0.38
UBE3B-210ENST00000539599 COA3Q9Y2R0 106 aaPredicted RBP12.67□□□□□ -0.38
UBE3B-210ENST00000539599 NUP210LQ5VU65 1888 aa12.66□□□□□ -0.38
UBE3B-210ENST00000539599 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.66□□□□□ -0.38
UBE3B-210ENST00000539599 H3BMH7 237 aa12.66□□□□□ -0.38
UBE3B-210ENST00000539599 ZNF254O75437 659 aa12.66□□□□□ -0.38
UBE3B-210ENST00000539599 OR6A2O95222 327 aa12.66□□□□□ -0.38
UBE3B-210ENST00000539599 CD3DP04234 171 aa12.66□□□□□ -0.38
UBE3B-210ENST00000539599 CSN2P05814 226 aa12.66□□□□□ -0.38
UBE3B-210ENST00000539599 CSF2RBP32927 897 aa12.66□□□□□ -0.38
UBE3B-210ENST00000539599 H2BFSP57053 126 aa12.66□□□□□ -0.38
UBE3B-210ENST00000539599 ANGPT1Q15389 498 aa12.66□□□□□ -0.38
UBE3B-210ENST00000539599 ISXQ2M1V0 245 aa12.66□□□□□ -0.38
UBE3B-210ENST00000539599 C2orf76Q3KRA6 126 aa12.66□□□□□ -0.38
UBE3B-210ENST00000539599 ESCO2Q56NI9 601 aa12.66□□□□□ -0.38
UBE3B-210ENST00000539599 C17orf107Q6ZR85 190 aa12.66□□□□□ -0.38
UBE3B-210ENST00000539599 ZNF440Q8IYI8 595 aa12.66□□□□□ -0.38
UBE3B-210ENST00000539599 NKD1Q969G9 470 aa12.66□□□□□ -0.38
UBE3B-210ENST00000539599 NPDC1Q9NQX5 325 aaPredicted RBP12.66□□□□□ -0.38
UBE3B-210ENST00000539599 TRBV5-7A0A0A0MS05 114 aa12.66□□□□□ -0.38
UBE3B-210ENST00000539599 FRG2CA6NGY1 282 aa12.66□□□□□ -0.38
UBE3B-210ENST00000539599 M0QYG6 137 aa12.66□□□□□ -0.38
UBE3B-210ENST00000539599 SOX1O00570 391 aaPredicted RBP12.66□□□□□ -0.38
UBE3B-210ENST00000539599 CD1AP06126 327 aa12.66□□□□□ -0.38
UBE3B-210ENST00000539599 ARL4DP49703 201 aa12.66□□□□□ -0.38
UBE3B-210ENST00000539599 SPOCK1Q08629 439 aa12.66□□□□□ -0.38
UBE3B-210ENST00000539599 MOGAT2Q3SYC2 334 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms