RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 DUSP13Q9UII6 198 aa12.3□□□□□ -0.44
RTN3P1-201ENST00000536295 CDC42EP3Q9UKI2 254 aa12.3□□□□□ -0.44
RTN3P1-201ENST00000536295 A4GNTQ9UNA3 340 aa12.3□□□□□ -0.44
RTN3P1-201ENST00000536295 SNX13Q9Y5W8 968 aa12.3□□□□□ -0.44
RTN3P1-201ENST00000536295 A0A1W2PPW3 197 aa12.29□□□□□ -0.44
RTN3P1-201ENST00000536295 J3KTA2 159 aa12.29□□□□□ -0.44
RTN3P1-201ENST00000536295 CXCR6O00574 342 aa12.29□□□□□ -0.44
RTN3P1-201ENST00000536295 SYNGR3O43761 229 aa12.29□□□□□ -0.44
RTN3P1-201ENST00000536295 LMX1BO60663 402 aa12.29□□□□□ -0.44
RTN3P1-201ENST00000536295 IGF2P01344 180 aa12.29□□□□□ -0.44
RTN3P1-201ENST00000536295 IFNW1P05000 195 aa12.29□□□□□ -0.44
RTN3P1-201ENST00000536295 ZNF23P17027 643 aa12.29□□□□□ -0.44
RTN3P1-201ENST00000536295 CDAP32320 146 aa12.29□□□□□ -0.44
RTN3P1-201ENST00000536295 SLC7A2P52569 658 aa12.29□□□□□ -0.44
RTN3P1-201ENST00000536295 SEC24CP53992 1094 aa12.29□□□□□ -0.44
RTN3P1-201ENST00000536295 FMODQ06828 376 aa12.29□□□□□ -0.44
RTN3P1-201ENST00000536295 CD47Q08722 323 aa12.29□□□□□ -0.44
RTN3P1-201ENST00000536295 ALKBH6Q3KRA9 238 aa12.29□□□□□ -0.44
RTN3P1-201ENST00000536295 ALG10Q5BKT4 473 aa12.29□□□□□ -0.44
RTN3P1-201ENST00000536295 ARMC4Q5T2S8 1044 aa12.29□□□□□ -0.44
RTN3P1-201ENST00000536295 FAM166AQ6J272 317 aa12.29□□□□□ -0.44
RTN3P1-201ENST00000536295 PODNL1Q6PEZ8 512 aa12.29□□□□□ -0.44
RTN3P1-201ENST00000536295 IGFN1Q86VF2 1251 aa12.29□□□□□ -0.44
RTN3P1-201ENST00000536295 PAQR4Q8N4S7 273 aaPredicted RBP12.29□□□□□ -0.44
RTN3P1-201ENST00000536295 RBM15BQ8NDT2 890 aaKnown RBP12.29□□□□□ -0.44
RTN3P1-201ENST00000536295 UBASH3BQ8TF42 649 aa12.29□□□□□ -0.44
RTN3P1-201ENST00000536295 LIPHQ8WWY8 451 aa12.29□□□□□ -0.44
RTN3P1-201ENST00000536295 NSMAFQ92636 917 aa12.29□□□□□ -0.44
RTN3P1-201ENST00000536295 HDAC2Q92769 488 aaKnown RBP12.29□□□□□ -0.44
RTN3P1-201ENST00000536295 MSI2Q96DH6 328 aaKnown RBP12.29□□□□□ -0.44
RTN3P1-201ENST00000536295 BPIFA2Q96DR5 249 aa12.29□□□□□ -0.44
RTN3P1-201ENST00000536295 FNDC11Q9BVV2 318 aa12.29□□□□□ -0.44
RTN3P1-201ENST00000536295 SHARPINQ9H0F6 387 aa12.29□□□□□ -0.44
RTN3P1-201ENST00000536295 CDH20Q9HBT6 801 aa12.29□□□□□ -0.44
RTN3P1-201ENST00000536295 MED4Q9NPJ6 270 aa12.29□□□□□ -0.44
RTN3P1-201ENST00000536295 KCNS2Q9ULS6 477 aa12.29□□□□□ -0.44
RTN3P1-201ENST00000536295 AP3M1Q9Y2T2 418 aa12.29□□□□□ -0.44
RTN3P1-201ENST00000536295 YLPM1P49750 1951 aaKnown RBP12.29□□□□□ -0.44
RTN3P1-201ENST00000536295 NME4O00746 187 aa12.28□□□□□ -0.44
RTN3P1-201ENST00000536295 CCDC22O60826 627 aa12.28□□□□□ -0.44
RTN3P1-201ENST00000536295 SAGP10523 405 aaPredicted RBP12.28□□□□□ -0.44
RTN3P1-201ENST00000536295 MAKP20794 623 aa12.28□□□□□ -0.44
RTN3P1-201ENST00000536295 EVX1P49640 407 aa12.28□□□□□ -0.44
RTN3P1-201ENST00000536295 PLP2Q04941 152 aa12.28□□□□□ -0.44
RTN3P1-201ENST00000536295 RGS7BPQ6MZT1 257 aaPredicted RBP12.28□□□□□ -0.44
RTN3P1-201ENST00000536295 IL17RELQ6ZVW7 336 aa12.28□□□□□ -0.44
RTN3P1-201ENST00000536295 FKBP9P1Q75LS8 142 aa12.28□□□□□ -0.44
RTN3P1-201ENST00000536295 CXXC5Q7LFL8 322 aaKnown RBP12.28□□□□□ -0.44
RTN3P1-201ENST00000536295 TREML1Q86YW5 311 aa12.28□□□□□ -0.44
RTN3P1-201ENST00000536295 NRMQ8IXM6 262 aa12.28□□□□□ -0.44
RTN3P1-201ENST00000536295 ZNF786Q8N393 782 aa12.28□□□□□ -0.44
RTN3P1-201ENST00000536295 ICA1LQ8NDH6 482 aa12.28□□□□□ -0.44
RTN3P1-201ENST00000536295 SNX18Q96RF0 628 aa12.28□□□□□ -0.44
RTN3P1-201ENST00000536295 SEPHS2Q99611 448 aa12.28□□□□□ -0.44
RTN3P1-201ENST00000536295 SOX7Q9BT81 388 aa12.28□□□□□ -0.44
RTN3P1-201ENST00000536295 TXNIPQ9H3M7 391 aa12.28□□□□□ -0.44
RTN3P1-201ENST00000536295 MS4A5Q9H3V2 200 aa12.28□□□□□ -0.44
RTN3P1-201ENST00000536295 STX18Q9P2W9 335 aaKnown RBP12.28□□□□□ -0.44
RTN3P1-201ENST00000536295 CUBNO60494 3623 aa12.27□□□□□ -0.44
RTN3P1-201ENST00000536295 TRAV27A0A087WT01 109 aa12.27□□□□□ -0.45
RTN3P1-201ENST00000536295 IGKV1D-43A0A0B4J1Z2 117 aa12.27□□□□□ -0.45
RTN3P1-201ENST00000536295 IQCMA0A1B0GVH7 501 aa12.27□□□□□ -0.45
RTN3P1-201ENST00000536295 CENPBD1B2RD01 187 aa12.27□□□□□ -0.45
RTN3P1-201ENST00000536295 SERPINA1P01009 418 aa12.27□□□□□ -0.45
RTN3P1-201ENST00000536295 TGFAP01135 160 aa12.27□□□□□ -0.45
RTN3P1-201ENST00000536295 LCKP06239 509 aa12.27□□□□□ -0.45
RTN3P1-201ENST00000536295 TSPAN19P0C672 248 aa12.27□□□□□ -0.45
RTN3P1-201ENST00000536295 FAM157CP0CG43 387 aa12.27□□□□□ -0.45
RTN3P1-201ENST00000536295 NAT2P11245 290 aa12.27□□□□□ -0.45
RTN3P1-201ENST00000536295 NCK1P16333 377 aa12.27□□□□□ -0.45
RTN3P1-201ENST00000536295 CCNOP22674 350 aa12.27□□□□□ -0.45
RTN3P1-201ENST00000536295 IGFBP5P24593 272 aa12.27□□□□□ -0.45
RTN3P1-201ENST00000536295 GIFP27352 417 aa12.27□□□□□ -0.45
RTN3P1-201ENST00000536295 IL2RGP31785 369 aa12.27□□□□□ -0.45
RTN3P1-201ENST00000536295 GSK3BP49841 420 aa12.27□□□□□ -0.45
RTN3P1-201ENST00000536295 NUDT2P50583 147 aa12.27□□□□□ -0.45
RTN3P1-201ENST00000536295 CTXN1P60606 82 aa12.27□□□□□ -0.45
RTN3P1-201ENST00000536295 ERVS71-1P61550 626 aa12.27□□□□□ -0.45
RTN3P1-201ENST00000536295 HSF2Q03933 536 aa12.27□□□□□ -0.45
RTN3P1-201ENST00000536295 TRAM2Q15035 370 aa12.27□□□□□ -0.45
RTN3P1-201ENST00000536295 TRIP10Q15642 601 aa12.27□□□□□ -0.45
RTN3P1-201ENST00000536295 SGCAQ16586 387 aa12.27□□□□□ -0.45
RTN3P1-201ENST00000536295 NKPD1Q17RQ9 610 aa12.27□□□□□ -0.45
RTN3P1-201ENST00000536295 TBC1D28Q2M2D7 210 aa12.27□□□□□ -0.45
RTN3P1-201ENST00000536295 IFI44LQ53G44 452 aa12.27□□□□□ -0.45
RTN3P1-201ENST00000536295 C10orf128Q5T292 105 aa12.27□□□□□ -0.45
RTN3P1-201ENST00000536295 DPPA2Q7Z7J5 298 aa12.27□□□□□ -0.45
RTN3P1-201ENST00000536295 OFCC1Q8IZS5 231 aa12.27□□□□□ -0.45
RTN3P1-201ENST00000536295 CLDN22Q8N7P3 220 aa12.27□□□□□ -0.45
RTN3P1-201ENST00000536295 OR51A7Q8NH64 312 aa12.27□□□□□ -0.45
RTN3P1-201ENST00000536295 GEMIN6Q8WXD5 167 aaKnown RBP12.27□□□□□ -0.45
RTN3P1-201ENST00000536295 FAM162AQ96A26 154 aa12.27□□□□□ -0.45
RTN3P1-201ENST00000536295 HSH2DQ96JZ2 352 aa12.27□□□□□ -0.45
RTN3P1-201ENST00000536295 HOPXQ9BPY8 73 aaPredicted RBP12.27□□□□□ -0.45
RTN3P1-201ENST00000536295 KCNN2Q9H2S1 579 aa12.27□□□□□ -0.45
RTN3P1-201ENST00000536295 C1orf198Q9H425 327 aa12.27□□□□□ -0.45
RTN3P1-201ENST00000536295 EFCAB1Q9HAE3 211 aa12.27□□□□□ -0.45
RTN3P1-201ENST00000536295 CCNB1IP1Q9NPC3 277 aa12.27□□□□□ -0.45
RTN3P1-201ENST00000536295 MAN2C1Q9NTJ4 1040 aa12.27□□□□□ -0.45
RTN3P1-201ENST00000536295 TMEM160Q9NX00 188 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms