RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 LRMDAQ9H2I8 198 aa13.3□□□□□ -0.28
CPSF1-211ENST00000533492 C1orf198Q9H425 327 aa13.3□□□□□ -0.28
CPSF1-211ENST00000533492 MED4Q9NPJ6 270 aa13.3□□□□□ -0.28
CPSF1-211ENST00000533492 CMTM6Q9NX76 183 aa13.3□□□□□ -0.28
CPSF1-211ENST00000533492 FZR1Q9UM11 496 aa13.3□□□□□ -0.28
CPSF1-211ENST00000533492 ATRQ13535 2644 aa13.29□□□□□ -0.28
CPSF1-211ENST00000533492 IQCMA0A1B0GVH7 501 aa13.29□□□□□ -0.28
CPSF1-211ENST00000533492 HTR3EA5X5Y0 456 aa13.29□□□□□ -0.28
CPSF1-211ENST00000533492 MGRN1O60291 552 aa13.29□□□□□ -0.28
CPSF1-211ENST00000533492 ZNF682O95780 498 aa13.29□□□□□ -0.28
CPSF1-211ENST00000533492 IFNW1P05000 195 aa13.29□□□□□ -0.28
CPSF1-211ENST00000533492 SAGP10523 405 aaPredicted RBP13.29□□□□□ -0.28
CPSF1-211ENST00000533492 NR2C1P13056 603 aa13.29□□□□□ -0.28
CPSF1-211ENST00000533492 COX4I1P13073 169 aa13.29□□□□□ -0.28
CPSF1-211ENST00000533492 TCN1P20061 433 aaPredicted RBP13.29□□□□□ -0.28
CPSF1-211ENST00000533492 GIFP27352 417 aa13.29□□□□□ -0.28
CPSF1-211ENST00000533492 MDH1P40925 334 aaKnown RBP13.29□□□□□ -0.28
CPSF1-211ENST00000533492 YAP1P46937 504 aaKnown RBP13.29□□□□□ -0.28
CPSF1-211ENST00000533492 LIPEQ05469 1076 aa13.29□□□□□ -0.28
CPSF1-211ENST00000533492 FXNQ16595 210 aa13.29□□□□□ -0.28
CPSF1-211ENST00000533492 MSMPQ1L6U9 139 aa13.29□□□□□ -0.28
CPSF1-211ENST00000533492 ALG10Q5BKT4 473 aa13.29□□□□□ -0.28
CPSF1-211ENST00000533492 RGS7BPQ6MZT1 257 aaPredicted RBP13.29□□□□□ -0.28
CPSF1-211ENST00000533492 CXXC5Q7LFL8 322 aaKnown RBP13.29□□□□□ -0.28
CPSF1-211ENST00000533492 LRP11Q86VZ4 500 aa13.29□□□□□ -0.28
CPSF1-211ENST00000533492 SLC15A3Q8IY34 581 aa13.29□□□□□ -0.28
CPSF1-211ENST00000533492 LRRC18Q8N456 261 aa13.29□□□□□ -0.28
CPSF1-211ENST00000533492 RBM15BQ8NDT2 890 aaKnown RBP13.29□□□□□ -0.28
CPSF1-211ENST00000533492 MSI2Q96DH6 328 aaKnown RBP13.29□□□□□ -0.28
CPSF1-211ENST00000533492 BPIFA2Q96DR5 249 aa13.29□□□□□ -0.28
CPSF1-211ENST00000533492 HOPXQ9BPY8 73 aaPredicted RBP13.29□□□□□ -0.28
CPSF1-211ENST00000533492 CHODLQ9H9P2 273 aa13.29□□□□□ -0.28
CPSF1-211ENST00000533492 EFCAB1Q9HAE3 211 aa13.29□□□□□ -0.28
CPSF1-211ENST00000533492 A4GNTQ9UNA3 340 aa13.29□□□□□ -0.28
CPSF1-211ENST00000533492 MALRD1Q5VYJ5 2156 aa13.29□□□□□ -0.28
CPSF1-211ENST00000533492 A0A1W2PPW3 197 aa13.28□□□□□ -0.28
CPSF1-211ENST00000533492 LRP5LA4QPB2 252 aa13.28□□□□□ -0.28
CPSF1-211ENST00000533492 CXCR6O00574 342 aa13.28□□□□□ -0.28
CPSF1-211ENST00000533492 PIP5K1CO60331 668 aa13.28□□□□□ -0.28
CPSF1-211ENST00000533492 TGFAP01135 160 aa13.28□□□□□ -0.28
CPSF1-211ENST00000533492 IGFBP1P08833 259 aaPredicted RBP13.28□□□□□ -0.28
CPSF1-211ENST00000533492 FAM157BP0CG42 384 aa13.28□□□□□ -0.28
CPSF1-211ENST00000533492 CCL2P13500 99 aa13.28□□□□□ -0.28
CPSF1-211ENST00000533492 ALDH3B1P43353 468 aa13.28□□□□□ -0.28
CPSF1-211ENST00000533492 CHN2P52757 468 aa13.28□□□□□ -0.28
CPSF1-211ENST00000533492 SEC24CP53992 1094 aa13.28□□□□□ -0.28
CPSF1-211ENST00000533492 HSF2Q03933 536 aa13.28□□□□□ -0.28
CPSF1-211ENST00000533492 CD47Q08722 323 aa13.28□□□□□ -0.28
CPSF1-211ENST00000533492 TOP3AQ13472 1001 aaPredicted RBP13.28□□□□□ -0.28
CPSF1-211ENST00000533492 TRAM2Q15035 370 aa13.28□□□□□ -0.28
CPSF1-211ENST00000533492 TAF11Q15544 211 aa13.28□□□□□ -0.28
CPSF1-211ENST00000533492 TBC1D28Q2M2D7 210 aa13.28□□□□□ -0.28
CPSF1-211ENST00000533492 ARMC4Q5T2S8 1044 aa13.28□□□□□ -0.28
CPSF1-211ENST00000533492 FKBP9P1Q75LS8 142 aa13.28□□□□□ -0.28
CPSF1-211ENST00000533492 VTCN1Q7Z7D3 282 aa13.28□□□□□ -0.28
CPSF1-211ENST00000533492 RBP7Q96R05 134 aa13.28□□□□□ -0.28
CPSF1-211ENST00000533492 SEPHS2Q99611 448 aa13.28□□□□□ -0.28
CPSF1-211ENST00000533492 OR51B6Q9H340 312 aa13.28□□□□□ -0.28
CPSF1-211ENST00000533492 TXNIPQ9H3M7 391 aa13.28□□□□□ -0.28
CPSF1-211ENST00000533492 SIAEQ9HAT2 523 aa13.28□□□□□ -0.28
CPSF1-211ENST00000533492 CCNB1IP1Q9NPC3 277 aa13.28□□□□□ -0.28
CPSF1-211ENST00000533492 RHCGQ9UBD6 479 aa13.28□□□□□ -0.28
CPSF1-211ENST00000533492 GPR160Q9UJ42 338 aa13.28□□□□□ -0.28
CPSF1-211ENST00000533492 ZNF346Q9UL40 294 aaKnown RBP13.28□□□□□ -0.28
CPSF1-211ENST00000533492 HIF3AQ9Y2N7 669 aa13.28□□□□□ -0.28
CPSF1-211ENST00000533492 ANK3Q12955 4377 aaKnown RBP13.27□□□□□ -0.28
CPSF1-211ENST00000533492 GMNCA6NCL1 334 aa13.27□□□□□ -0.29
CPSF1-211ENST00000533492 NPIPB13A6NJU9 1138 aa13.27□□□□□ -0.29
CPSF1-211ENST00000533492 RNF212BA8MTL3 300 aa13.27□□□□□ -0.29
CPSF1-211ENST00000533492 NPIPB4C9JG80 1138 aa13.27□□□□□ -0.29
CPSF1-211ENST00000533492 LYNX1G3V0Z9 82 aa13.27□□□□□ -0.29
CPSF1-211ENST00000533492 NDUFAB1O14561 156 aa13.27□□□□□ -0.29
CPSF1-211ENST00000533492 SLC2A10O95528 541 aa13.27□□□□□ -0.29
CPSF1-211ENST00000533492 LCKP06239 509 aa13.27□□□□□ -0.29
CPSF1-211ENST00000533492 TSPAN19P0C672 248 aa13.27□□□□□ -0.29
CPSF1-211ENST00000533492 LYNX1P0DP58 116 aa13.27□□□□□ -0.29
CPSF1-211ENST00000533492 APLNRP35414 380 aa13.27□□□□□ -0.29
CPSF1-211ENST00000533492 GUCA1AP43080 201 aaPredicted RBP13.27□□□□□ -0.29
CPSF1-211ENST00000533492 RAD52P43351 418 aa13.27□□□□□ -0.29
CPSF1-211ENST00000533492 SLC7A2P52569 658 aa13.27□□□□□ -0.29
CPSF1-211ENST00000533492 CTXN1P60606 82 aa13.27□□□□□ -0.29
CPSF1-211ENST00000533492 MAD2L1BPQ15013 274 aaPredicted RBP13.27□□□□□ -0.29
CPSF1-211ENST00000533492 SGCAQ16586 387 aa13.27□□□□□ -0.29
CPSF1-211ENST00000533492 NKPD1Q17RQ9 610 aa13.27□□□□□ -0.29
CPSF1-211ENST00000533492 IFI44LQ53G44 452 aa13.27□□□□□ -0.29
CPSF1-211ENST00000533492 C10orf128Q5T292 105 aa13.27□□□□□ -0.29
CPSF1-211ENST00000533492 RRM2BQ7LG56 351 aa13.27□□□□□ -0.29
CPSF1-211ENST00000533492 NRMQ8IXM6 262 aa13.27□□□□□ -0.29
CPSF1-211ENST00000533492 ARIH2OSQ8N7S6 290 aa13.27□□□□□ -0.29
CPSF1-211ENST00000533492 OR51A7Q8NH64 312 aa13.27□□□□□ -0.29
CPSF1-211ENST00000533492 SPATA3Q8NHX4 192 aa13.27□□□□□ -0.29
CPSF1-211ENST00000533492 GEMIN6Q8WXD5 167 aaKnown RBP13.27□□□□□ -0.29
CPSF1-211ENST00000533492 C11orf40Q8WZ69 217 aa13.27□□□□□ -0.29
CPSF1-211ENST00000533492 NSMAFQ92636 917 aa13.27□□□□□ -0.29
CPSF1-211ENST00000533492 HDAC2Q92769 488 aaKnown RBP13.27□□□□□ -0.29
CPSF1-211ENST00000533492 MYEF2Q9P2K5 600 aaKnown RBP13.27□□□□□ -0.29
CPSF1-211ENST00000533492 GMPR2Q9P2T1 348 aaKnown RBP13.27□□□□□ -0.29
CPSF1-211ENST00000533492 SNX13Q9Y5W8 968 aa13.27□□□□□ -0.29
CPSF1-211ENST00000533492 COL6A5A8TX70 2615 aa13.27□□□□□ -0.29
CPSF1-211ENST00000533492 J3KTA2 159 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms