RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 TBPL2Q6SJ96 375 aa12.77□□□□□ -0.37
UBE2D3-228ENST00000508974 CBLL1Q75N03 491 aa12.77□□□□□ -0.37
UBE2D3-228ENST00000508974 SLC16A14Q7RTX9 510 aa12.77□□□□□ -0.37
UBE2D3-228ENST00000508974 CPLX4Q7Z7G2 160 aa12.77□□□□□ -0.37
UBE2D3-228ENST00000508974 LRP11Q86VZ4 500 aa12.77□□□□□ -0.37
UBE2D3-228ENST00000508974 OFCC1Q8IZS5 231 aa12.77□□□□□ -0.37
UBE2D3-228ENST00000508974 CLDN22Q8N7P3 220 aa12.77□□□□□ -0.37
UBE2D3-228ENST00000508974 OR13C2Q8NGS9 318 aa12.77□□□□□ -0.37
UBE2D3-228ENST00000508974 NSMAFQ92636 917 aa12.77□□□□□ -0.37
UBE2D3-228ENST00000508974 HDAC2Q92769 488 aaKnown RBP12.77□□□□□ -0.37
UBE2D3-228ENST00000508974 FOXN4Q96NZ1 517 aa12.77□□□□□ -0.37
UBE2D3-228ENST00000508974 DOK1Q99704 481 aa12.77□□□□□ -0.37
UBE2D3-228ENST00000508974 MRPL13Q9BYD1 178 aaKnown RBP12.77□□□□□ -0.37
UBE2D3-228ENST00000508974 RAB1BQ9H0U4 201 aa12.77□□□□□ -0.37
UBE2D3-228ENST00000508974 MYLK2Q9H1R3 596 aa12.77□□□□□ -0.37
UBE2D3-228ENST00000508974 ADA2Q9NZK5 511 aa12.77□□□□□ -0.37
UBE2D3-228ENST00000508974 SPEF1Q9Y4P9 236 aa12.77□□□□□ -0.37
UBE2D3-228ENST00000508974 IGKV1D-43A0A0B4J1Z2 117 aa12.76□□□□□ -0.37
UBE2D3-228ENST00000508974 EFCAB9A8MZ26 197 aa12.76□□□□□ -0.37
UBE2D3-228ENST00000508974 ATP8B1O43520 1251 aa12.76□□□□□ -0.37
UBE2D3-228ENST00000508974 IGF2P01344 180 aa12.76□□□□□ -0.37
UBE2D3-228ENST00000508974 SERPINA5P05154 406 aa12.76□□□□□ -0.37
UBE2D3-228ENST00000508974 TCN1P20061 433 aaPredicted RBP12.76□□□□□ -0.37
UBE2D3-228ENST00000508974 DRD4P21917 467 aa12.76□□□□□ -0.37
UBE2D3-228ENST00000508974 USF1P22415 310 aaPredicted RBP12.76□□□□□ -0.37
UBE2D3-228ENST00000508974 LSP1P33241 339 aa12.76□□□□□ -0.37
UBE2D3-228ENST00000508974 CTXN1P60606 82 aa12.76□□□□□ -0.37
UBE2D3-228ENST00000508974 MAD2L1BPQ15013 274 aaPredicted RBP12.76□□□□□ -0.37
UBE2D3-228ENST00000508974 HIST3H3Q16695 136 aa12.76□□□□□ -0.37
UBE2D3-228ENST00000508974 ALKBH6Q3KRA9 238 aa12.76□□□□□ -0.37
UBE2D3-228ENST00000508974 SLC36A2Q495M3 483 aa12.76□□□□□ -0.37
UBE2D3-228ENST00000508974 IQCCQ4KMZ1 466 aa12.76□□□□□ -0.37
UBE2D3-228ENST00000508974 ARMC4Q5T2S8 1044 aa12.76□□□□□ -0.37
UBE2D3-228ENST00000508974 C6orf52Q5T4I8 152 aa12.76□□□□□ -0.37
UBE2D3-228ENST00000508974 TMEM53Q6P2H8 277 aa12.76□□□□□ -0.37
UBE2D3-228ENST00000508974 HACD2Q6Y1H2 254 aa12.76□□□□□ -0.37
UBE2D3-228ENST00000508974 ZNF730Q6ZMV8 503 aa12.76□□□□□ -0.37
UBE2D3-228ENST00000508974 HDDC2Q7Z4H3 204 aa12.76□□□□□ -0.37
UBE2D3-228ENST00000508974 PAQR4Q8N4S7 273 aaPredicted RBP12.76□□□□□ -0.37
UBE2D3-228ENST00000508974 FAM156AQ8NDB6 213 aa12.76□□□□□ -0.37
UBE2D3-228ENST00000508974 ICA1LQ8NDH6 482 aa12.76□□□□□ -0.37
UBE2D3-228ENST00000508974 SLC30A7Q8NEW0 376 aa12.76□□□□□ -0.37
UBE2D3-228ENST00000508974 LIPHQ8WWY8 451 aa12.76□□□□□ -0.37
UBE2D3-228ENST00000508974 MRPL24Q96A35 216 aaKnown RBP12.76□□□□□ -0.37
UBE2D3-228ENST00000508974 CMTM5Q96DZ9 223 aa12.76□□□□□ -0.37
UBE2D3-228ENST00000508974 NSRP1Q9H0G5 558 aaKnown RBP12.76□□□□□ -0.37
UBE2D3-228ENST00000508974 TXNIPQ9H3M7 391 aa12.76□□□□□ -0.37
UBE2D3-228ENST00000508974 MYEF2Q9P2K5 600 aaKnown RBP12.76□□□□□ -0.37
UBE2D3-228ENST00000508974 HIF3AQ9Y2N7 669 aa12.76□□□□□ -0.37
UBE2D3-228ENST00000508974 V9GYQ6 96 aa12.76□□□□□ -0.37
UBE2D3-228ENST00000508974 A0A087WUU8 490 aa12.75□□□□□ -0.37
UBE2D3-228ENST00000508974 A8MV72 311 aaPredicted RBP12.75□□□□□ -0.37
UBE2D3-228ENST00000508974 LYNX1G3V0Z9 82 aa12.75□□□□□ -0.37
UBE2D3-228ENST00000508974 TLX2O43763 284 aaPredicted RBP12.75□□□□□ -0.37
UBE2D3-228ENST00000508974 SNX3O60493 162 aa12.75□□□□□ -0.37
UBE2D3-228ENST00000508974 ENTPD5O75356 428 aa12.75□□□□□ -0.37
UBE2D3-228ENST00000508974 ERCC1P07992 297 aaPredicted RBP12.75□□□□□ -0.37
UBE2D3-228ENST00000508974 IGFBP1P08833 259 aaPredicted RBP12.75□□□□□ -0.37
UBE2D3-228ENST00000508974 TSPAN19P0C672 248 aa12.75□□□□□ -0.37
UBE2D3-228ENST00000508974 IGHV4-31P0DP07 118 aa12.75□□□□□ -0.37
UBE2D3-228ENST00000508974 LYNX1P0DP58 116 aa12.75□□□□□ -0.37
UBE2D3-228ENST00000508974 DAOP14920 347 aa12.75□□□□□ -0.37
UBE2D3-228ENST00000508974 ALDH3B1P43353 468 aa12.75□□□□□ -0.37
UBE2D3-228ENST00000508974 NR4A2P43354 598 aa12.75□□□□□ -0.37
UBE2D3-228ENST00000508974 PRKCDQ05655 676 aa12.75□□□□□ -0.37
UBE2D3-228ENST00000508974 SGCAQ16586 387 aa12.75□□□□□ -0.37
UBE2D3-228ENST00000508974 OAFQ86UD1 273 aa12.75□□□□□ -0.37
UBE2D3-228ENST00000508974 TSPAN32Q96QS1 320 aa12.75□□□□□ -0.37
UBE2D3-228ENST00000508974 BPESC1Q9GZL8 116 aa12.75□□□□□ -0.37
UBE2D3-228ENST00000508974 DENND2DQ9H6A0 471 aaPredicted RBP12.75□□□□□ -0.37
UBE2D3-228ENST00000508974 CDH20Q9HBT6 801 aa12.75□□□□□ -0.37
UBE2D3-228ENST00000508974 SLC7A8Q9UHI5 535 aa12.75□□□□□ -0.37
UBE2D3-228ENST00000508974 DUSP13Q9UII6 198 aa12.75□□□□□ -0.37
UBE2D3-228ENST00000508974 FBXL3Q9UKT7 428 aa12.75□□□□□ -0.37
UBE2D3-228ENST00000508974 ZNF346Q9UL40 294 aaKnown RBP12.75□□□□□ -0.37
UBE2D3-228ENST00000508974 IGHV4-61A0A0C4DH41 118 aa12.74□□□□□ -0.37
UBE2D3-228ENST00000508974 A0A1W2PPW3 197 aa12.74□□□□□ -0.37
UBE2D3-228ENST00000508974 LOC390937A0A1W2PQ73 354 aa12.74□□□□□ -0.37
UBE2D3-228ENST00000508974 VWC2LB2RUY7 222 aa12.74□□□□□ -0.37
UBE2D3-228ENST00000508974 H7C1C5 153 aa12.74□□□□□ -0.37
UBE2D3-228ENST00000508974 M0R233 179 aa12.74□□□□□ -0.37
UBE2D3-228ENST00000508974 DIRAS1O95057 198 aa12.74□□□□□ -0.37
UBE2D3-228ENST00000508974 CCNOP22674 350 aa12.74□□□□□ -0.37
UBE2D3-228ENST00000508974 APEX1P27695 318 aaKnown RBP12.74□□□□□ -0.37
UBE2D3-228ENST00000508974 GLRXP35754 106 aa12.74□□□□□ -0.37
UBE2D3-228ENST00000508974 PRSS12P56730 875 aa12.74□□□□□ -0.37
UBE2D3-228ENST00000508974 RPL27P61353 136 aaKnown RBP12.74□□□□□ -0.37
UBE2D3-228ENST00000508974 ERVS71-1P61550 626 aa12.74□□□□□ -0.37
UBE2D3-228ENST00000508974 RPS23P62266 143 aaKnown RBP12.74□□□□□ -0.37
UBE2D3-228ENST00000508974 LCN6P62502 163 aa12.74□□□□□ -0.37
UBE2D3-228ENST00000508974 GNGT1P63211 74 aa12.74□□□□□ -0.37
UBE2D3-228ENST00000508974 VLDLRP98155 873 aa12.74□□□□□ -0.37
UBE2D3-228ENST00000508974 HSF2Q03933 536 aa12.74□□□□□ -0.37
UBE2D3-228ENST00000508974 FXNQ16595 210 aa12.74□□□□□ -0.37
UBE2D3-228ENST00000508974 FGD3Q5JSP0 725 aa12.74□□□□□ -0.37
UBE2D3-228ENST00000508974 C10orf128Q5T292 105 aa12.74□□□□□ -0.37
UBE2D3-228ENST00000508974 GLYATQ6IB77 296 aa12.74□□□□□ -0.37
UBE2D3-228ENST00000508974 RRM2BQ7LG56 351 aa12.74□□□□□ -0.37
UBE2D3-228ENST00000508974 TSEN54Q7Z6J9 526 aaKnown RBP12.74□□□□□ -0.37
UBE2D3-228ENST00000508974 CYP4Z1Q86W10 505 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms