RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 MDH1P40925 334 aaKnown RBP10.26□□□□□ -0.77
CCHCR1-215ENST00000488920 ZNF84P51523 738 aa10.26□□□□□ -0.77
CCHCR1-215ENST00000488920 LIPEQ05469 1076 aa10.26□□□□□ -0.77
CCHCR1-215ENST00000488920 ST3GAL3Q11203 375 aa10.26□□□□□ -0.77
CCHCR1-215ENST00000488920 MAD2L1BPQ15013 274 aaPredicted RBP10.26□□□□□ -0.77
CCHCR1-215ENST00000488920 SLC36A2Q495M3 483 aa10.26□□□□□ -0.77
CCHCR1-215ENST00000488920 ARMC4Q5T2S8 1044 aa10.26□□□□□ -0.77
CCHCR1-215ENST00000488920 FAM166AQ6J272 317 aa10.26□□□□□ -0.77
CCHCR1-215ENST00000488920 SLC16A14Q7RTX9 510 aa10.26□□□□□ -0.77
CCHCR1-215ENST00000488920 NOXO1Q8NFA2 376 aa10.26□□□□□ -0.77
CCHCR1-215ENST00000488920 RP9Q8TA86 221 aaKnown RBP10.26□□□□□ -0.77
CCHCR1-215ENST00000488920 LIPHQ8WWY8 451 aa10.26□□□□□ -0.77
CCHCR1-215ENST00000488920 LZICQ8WZA0 190 aa10.26□□□□□ -0.77
CCHCR1-215ENST00000488920 NSMAFQ92636 917 aa10.26□□□□□ -0.77
CCHCR1-215ENST00000488920 BPIFA2Q96DR5 249 aa10.26□□□□□ -0.77
CCHCR1-215ENST00000488920 SEPHS2Q99611 448 aa10.26□□□□□ -0.77
CCHCR1-215ENST00000488920 SOX7Q9BT81 388 aa10.26□□□□□ -0.77
CCHCR1-215ENST00000488920 SHARPINQ9H0F6 387 aa10.26□□□□□ -0.77
CCHCR1-215ENST00000488920 OR51B6Q9H340 312 aa10.26□□□□□ -0.77
CCHCR1-215ENST00000488920 TMEM160Q9NX00 188 aa10.26□□□□□ -0.77
CCHCR1-215ENST00000488920 SLC7A8Q9UHI5 535 aa10.26□□□□□ -0.77
CCHCR1-215ENST00000488920 CHD3Q12873 2000 aaKnown RBP10.26□□□□□ -0.77
CCHCR1-215ENST00000488920 ATRQ13535 2644 aa10.25□□□□□ -0.77
CCHCR1-215ENST00000488920 A0A1W2PPW3 197 aa10.25□□□□□ -0.77
CCHCR1-215ENST00000488920 CENPBD1B2RD01 187 aa10.25□□□□□ -0.77
CCHCR1-215ENST00000488920 J3KTA2 159 aa10.25□□□□□ -0.77
CCHCR1-215ENST00000488920 GSTA4O15217 222 aa10.25□□□□□ -0.77
CCHCR1-215ENST00000488920 SLC2A10O95528 541 aa10.25□□□□□ -0.77
CCHCR1-215ENST00000488920 ZNF682O95780 498 aa10.25□□□□□ -0.77
CCHCR1-215ENST00000488920 TSPAN19P0C672 248 aa10.25□□□□□ -0.77
CCHCR1-215ENST00000488920 NAT2P11245 290 aa10.25□□□□□ -0.77
CCHCR1-215ENST00000488920 MAKP20794 623 aa10.25□□□□□ -0.77
CCHCR1-215ENST00000488920 IL2RGP31785 369 aa10.25□□□□□ -0.77
CCHCR1-215ENST00000488920 IFNA8P32881 189 aa10.25□□□□□ -0.77
CCHCR1-215ENST00000488920 RPS23P62266 143 aaKnown RBP10.25□□□□□ -0.77
CCHCR1-215ENST00000488920 TOP3AQ13472 1001 aaPredicted RBP10.25□□□□□ -0.77
CCHCR1-215ENST00000488920 RIN1Q13671 783 aa10.25□□□□□ -0.77
CCHCR1-215ENST00000488920 SGCAQ16586 387 aa10.25□□□□□ -0.77
CCHCR1-215ENST00000488920 ALKBH6Q3KRA9 238 aa10.25□□□□□ -0.77
CCHCR1-215ENST00000488920 ALG10Q5BKT4 473 aa10.25□□□□□ -0.77
CCHCR1-215ENST00000488920 IL17RELQ6ZVW7 336 aa10.25□□□□□ -0.77
CCHCR1-215ENST00000488920 HDDC2Q7Z4H3 204 aa10.25□□□□□ -0.77
CCHCR1-215ENST00000488920 DPPA2Q7Z7J5 298 aa10.25□□□□□ -0.77
CCHCR1-215ENST00000488920 IGFN1Q86VF2 1251 aa10.25□□□□□ -0.77
CCHCR1-215ENST00000488920 RBM15BQ8NDT2 890 aaKnown RBP10.25□□□□□ -0.77
CCHCR1-215ENST00000488920 HDAC2Q92769 488 aaKnown RBP10.25□□□□□ -0.77
CCHCR1-215ENST00000488920 PRRC1Q96M27 445 aa10.25□□□□□ -0.77
CCHCR1-215ENST00000488920 SNX18Q96RF0 628 aa10.25□□□□□ -0.77
CCHCR1-215ENST00000488920 FNDC11Q9BVV2 318 aa10.25□□□□□ -0.77
CCHCR1-215ENST00000488920 MS4A5Q9H3V2 200 aa10.25□□□□□ -0.77
CCHCR1-215ENST00000488920 CDH20Q9HBT6 801 aa10.25□□□□□ -0.77
CCHCR1-215ENST00000488920 KCNS2Q9ULS6 477 aa10.25□□□□□ -0.77
CCHCR1-215ENST00000488920 AP3M1Q9Y2T2 418 aa10.25□□□□□ -0.77
CCHCR1-215ENST00000488920 UGT2A1Q9Y4X1 527 aa10.25□□□□□ -0.77
CCHCR1-215ENST00000488920 CUBNO60494 3623 aa10.24□□□□□ -0.77
CCHCR1-215ENST00000488920 IGKV1D-43A0A0B4J1Z2 117 aa10.24□□□□□ -0.77
CCHCR1-215ENST00000488920 IQCMA0A1B0GVH7 501 aa10.24□□□□□ -0.77
CCHCR1-215ENST00000488920 SLC22A23A1A5C7 686 aa10.24□□□□□ -0.77
CCHCR1-215ENST00000488920 RNF212BA8MTL3 300 aa10.24□□□□□ -0.77
CCHCR1-215ENST00000488920 CXCR6O00574 342 aa10.24□□□□□ -0.77
CCHCR1-215ENST00000488920 NME4O00746 187 aa10.24□□□□□ -0.77
CCHCR1-215ENST00000488920 FFAR1O14842 300 aa10.24□□□□□ -0.77
CCHCR1-215ENST00000488920 CCDC22O60826 627 aa10.24□□□□□ -0.77
CCHCR1-215ENST00000488920 LILRA1O75019 489 aa10.24□□□□□ -0.77
CCHCR1-215ENST00000488920 CLPTM1O96005 669 aa10.24□□□□□ -0.77
CCHCR1-215ENST00000488920 PTHP01270 115 aa10.24□□□□□ -0.77
CCHCR1-215ENST00000488920 HPXP02790 462 aa10.24□□□□□ -0.77
CCHCR1-215ENST00000488920 IFNW1P05000 195 aa10.24□□□□□ -0.77
CCHCR1-215ENST00000488920 LCKP06239 509 aa10.24□□□□□ -0.77
CCHCR1-215ENST00000488920 MMP7P09237 267 aaPredicted RBP10.24□□□□□ -0.77
CCHCR1-215ENST00000488920 SAGP10523 405 aaPredicted RBP10.24□□□□□ -0.77
CCHCR1-215ENST00000488920 IGFBP5P24593 272 aa10.24□□□□□ -0.77
CCHCR1-215ENST00000488920 COL8A2P25067 703 aa10.24□□□□□ -0.77
CCHCR1-215ENST00000488920 APEX1P27695 318 aaKnown RBP10.24□□□□□ -0.77
CCHCR1-215ENST00000488920 SLC7A2P52569 658 aa10.24□□□□□ -0.77
CCHCR1-215ENST00000488920 ZNF133P52736 654 aaPredicted RBP10.24□□□□□ -0.77
CCHCR1-215ENST00000488920 CHN2P52757 468 aa10.24□□□□□ -0.77
CCHCR1-215ENST00000488920 ERVS71-1P61550 626 aa10.24□□□□□ -0.77
CCHCR1-215ENST00000488920 PLP2Q04941 152 aa10.24□□□□□ -0.77
CCHCR1-215ENST00000488920 FMODQ06828 376 aa10.24□□□□□ -0.77
CCHCR1-215ENST00000488920 CD47Q08722 323 aa10.24□□□□□ -0.77
CCHCR1-215ENST00000488920 TRAM2Q15035 370 aa10.24□□□□□ -0.77
CCHCR1-215ENST00000488920 TRIP10Q15642 601 aa10.24□□□□□ -0.77
CCHCR1-215ENST00000488920 NRN1LQ496H8 165 aa10.24□□□□□ -0.77
CCHCR1-215ENST00000488920 PABPC1L2AQ5JQF8 200 aa10.24□□□□□ -0.77
CCHCR1-215ENST00000488920 ELFN2Q5R3F8 820 aa10.24□□□□□ -0.77
CCHCR1-215ENST00000488920 FAM120AOSQ5T036 256 aa10.24□□□□□ -0.77
CCHCR1-215ENST00000488920 C10orf128Q5T292 105 aa10.24□□□□□ -0.77
CCHCR1-215ENST00000488920 RGS7BPQ6MZT1 257 aaPredicted RBP10.24□□□□□ -0.77
CCHCR1-215ENST00000488920 TBPL2Q6SJ96 375 aa10.24□□□□□ -0.77
CCHCR1-215ENST00000488920 FKBP9P1Q75LS8 142 aa10.24□□□□□ -0.77
CCHCR1-215ENST00000488920 ARPINQ7Z6K5 226 aa10.24□□□□□ -0.77
CCHCR1-215ENST00000488920 TREML1Q86YW5 311 aa10.24□□□□□ -0.77
CCHCR1-215ENST00000488920 NRMQ8IXM6 262 aa10.24□□□□□ -0.77
CCHCR1-215ENST00000488920 CLDN22Q8N7P3 220 aa10.24□□□□□ -0.77
CCHCR1-215ENST00000488920 CPEB3Q8NE35 698 aaKnown RBP10.24□□□□□ -0.77
CCHCR1-215ENST00000488920 OR51A7Q8NH64 312 aa10.24□□□□□ -0.77
CCHCR1-215ENST00000488920 NMD3Q96D46 503 aaKnown RBP10.24□□□□□ -0.77
CCHCR1-215ENST00000488920 HOPXQ9BPY8 73 aaPredicted RBP10.24□□□□□ -0.77
CCHCR1-215ENST00000488920 KCNN2Q9H2S1 579 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms