RNA–Protein interactions for RNA: ENST00000469930.1

BRAF-202, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene BRAF, Length 1,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-202ENST00000469930 ERRFI1Q9UJM3 462 aaPredicted RBP18.34■□□□□ 0.53
BRAF-202ENST00000469930 SLC5A6Q9Y289 635 aa18.34■□□□□ 0.53
BRAF-202ENST00000469930 GPR52Q9Y2T5 361 aa18.34■□□□□ 0.53
BRAF-202ENST00000469930 SMG1Q96Q15 3661 aaKnown RBP18.34■□□□□ 0.53
BRAF-202ENST00000469930 SH3D21A4FU49 640 aa18.33■□□□□ 0.52
BRAF-202ENST00000469930 A8MXE2 369 aa18.33■□□□□ 0.52
BRAF-202ENST00000469930 ZNF587BE7ETH6 402 aa18.33■□□□□ 0.52
BRAF-202ENST00000469930 H7C1C5 153 aa18.33■□□□□ 0.52
BRAF-202ENST00000469930 CTLA4P16410 223 aa18.33■□□□□ 0.52
BRAF-202ENST00000469930 SPI1P17947 270 aa18.33■□□□□ 0.52
BRAF-202ENST00000469930 MPGP29372 298 aa18.33■□□□□ 0.52
BRAF-202ENST00000469930 SH3BGRP55822 239 aaPredicted RBP18.33■□□□□ 0.52
BRAF-202ENST00000469930 LCN6P62502 163 aa18.33■□□□□ 0.52
BRAF-202ENST00000469930 IL5RAQ01344 420 aa18.33■□□□□ 0.52
BRAF-202ENST00000469930 P2RY6Q15077 328 aa18.33■□□□□ 0.52
BRAF-202ENST00000469930 SLC25A35Q3KQZ1 300 aa18.33■□□□□ 0.52
BRAF-202ENST00000469930 LINGO2Q7L985 606 aa18.33■□□□□ 0.52
BRAF-202ENST00000469930 GABRG1Q8N1C3 465 aa18.33■□□□□ 0.52
BRAF-202ENST00000469930 ZNF610Q8N9Z0 462 aa18.33■□□□□ 0.52
BRAF-202ENST00000469930 RFKQ969G6 155 aa18.33■□□□□ 0.52
BRAF-202ENST00000469930 COQ3Q9NZJ6 369 aa18.33■□□□□ 0.52
BRAF-202ENST00000469930 H2AFY2Q9P0M6 372 aaPredicted RBP18.33■□□□□ 0.52
BRAF-202ENST00000469930 ALPK2Q86TB3 2170 aa18.32■□□□□ 0.52
BRAF-202ENST00000469930 IGKV1D-43A0A0B4J1Z2 117 aa18.32■□□□□ 0.52
BRAF-202ENST00000469930 SNTNA6NMZ2 147 aa18.32■□□□□ 0.52
BRAF-202ENST00000469930 DCTN6O00399 190 aa18.32■□□□□ 0.52
BRAF-202ENST00000469930 SLC16A7O60669 478 aa18.32■□□□□ 0.52
BRAF-202ENST00000469930 WBP4O75554 376 aaKnown RBP18.32■□□□□ 0.52
BRAF-202ENST00000469930 KRT33AO76009 404 aa18.32■□□□□ 0.52
BRAF-202ENST00000469930 GLCEO94923 617 aa18.32■□□□□ 0.52
BRAF-202ENST00000469930 COX5AP20674 150 aa18.32■□□□□ 0.52
BRAF-202ENST00000469930 CXCR4P61073 352 aa18.32■□□□□ 0.52
BRAF-202ENST00000469930 CDK5R2Q13319 367 aa18.32■□□□□ 0.52
BRAF-202ENST00000469930 KCNMB1Q16558 191 aa18.32■□□□□ 0.52
BRAF-202ENST00000469930 FBXL19-AS1Q494R0 122 aa18.32■□□□□ 0.52
BRAF-202ENST00000469930 C1QTNF12Q5T7M4 302 aa18.32■□□□□ 0.52
BRAF-202ENST00000469930 LINC01590Q5TEZ4 76 aa18.32■□□□□ 0.52
BRAF-202ENST00000469930 MEPCEQ7L2J0 689 aaKnown RBP18.32■□□□□ 0.52
BRAF-202ENST00000469930 LIX1LQ8IVB5 337 aa18.32■□□□□ 0.52
BRAF-202ENST00000469930 LILRB4Q8NHJ6 448 aa18.32■□□□□ 0.52
BRAF-202ENST00000469930 APH1BQ8WW43 257 aa18.32■□□□□ 0.52
BRAF-202ENST00000469930 ZNF582Q96NG8 517 aaPredicted RBP18.32■□□□□ 0.52
BRAF-202ENST00000469930 HCAR1Q9BXC0 346 aa18.32■□□□□ 0.52
BRAF-202ENST00000469930 MARCH7Q9H992 704 aa18.32■□□□□ 0.52
BRAF-202ENST00000469930 CRLF2Q9HC73 371 aa18.32■□□□□ 0.52
BRAF-202ENST00000469930 SRA1Q9HD15 236 aaKnown RBP18.32■□□□□ 0.52
BRAF-202ENST00000469930 CLN6Q9NWW5 311 aa18.32■□□□□ 0.52
BRAF-202ENST00000469930 UGT2A1Q9Y4X1 527 aa18.32■□□□□ 0.52
BRAF-202ENST00000469930 ESPL1Q14674 2120 aa18.32■□□□□ 0.52
BRAF-202ENST00000469930 NCOA6Q14686 2063 aaPredicted RBP18.32■□□□□ 0.52
BRAF-202ENST00000469930 SLC22A31A6NKX4 558 aa18.31■□□□□ 0.52
BRAF-202ENST00000469930 FAM183AA6NL82 134 aa18.31■□□□□ 0.52
BRAF-202ENST00000469930 M0R129 80 aa18.31■□□□□ 0.52
BRAF-202ENST00000469930 HRGP04196 525 aa18.31■□□□□ 0.52
BRAF-202ENST00000469930 HTR1FP30939 366 aa18.31■□□□□ 0.52
BRAF-202ENST00000469930 ZNF84P51523 738 aa18.31■□□□□ 0.52
BRAF-202ENST00000469930 CSNK2BP67870 215 aa18.31■□□□□ 0.52
BRAF-202ENST00000469930 MRPS34P82930 218 aaKnown RBP18.31■□□□□ 0.52
BRAF-202ENST00000469930 ROR2Q01974 943 aaKnown RBP18.31■□□□□ 0.52
BRAF-202ENST00000469930 GLO1Q04760 184 aa18.31■□□□□ 0.52
BRAF-202ENST00000469930 FMODQ06828 376 aa18.31■□□□□ 0.52
BRAF-202ENST00000469930 XKRXQ6PP77 449 aa18.31■□□□□ 0.52
BRAF-202ENST00000469930 NCCRP1Q6ZVX7 275 aaPredicted RBP18.31■□□□□ 0.52
BRAF-202ENST00000469930 GLB1L2Q8IW92 636 aa18.31■□□□□ 0.52
BRAF-202ENST00000469930 RELL2Q8NC24 303 aaPredicted RBP18.31■□□□□ 0.52
BRAF-202ENST00000469930 C1orf162Q8NEQ5 155 aaPredicted RBP18.31■□□□□ 0.52
BRAF-202ENST00000469930 TSSK2Q96PF2 358 aa18.31■□□□□ 0.52
BRAF-202ENST00000469930 TEAD3Q99594 435 aa18.31■□□□□ 0.52
BRAF-202ENST00000469930 RASSF1Q9NS23 344 aa18.31■□□□□ 0.52
BRAF-202ENST00000469930 ELOVL5Q9NYP7 299 aa18.31■□□□□ 0.52
BRAF-202ENST00000469930 WARS2Q9UGM6 360 aaKnown RBP18.31■□□□□ 0.52
BRAF-202ENST00000469930 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.31■□□□□ 0.52
BRAF-202ENST00000469930 ZNF99A8MXY4 864 aaPredicted RBP18.3■□□□□ 0.52
BRAF-202ENST00000469930 HOXB1P14653 301 aaPredicted RBP18.3■□□□□ 0.52
BRAF-202ENST00000469930 NPR2P20594 1047 aa18.3■□□□□ 0.52
BRAF-202ENST00000469930 BMP5P22003 454 aa18.3■□□□□ 0.52
BRAF-202ENST00000469930 LAP3P28838 519 aa18.3■□□□□ 0.52
BRAF-202ENST00000469930 FAPQ12884 760 aa18.3■□□□□ 0.52
BRAF-202ENST00000469930 GGTLC2Q14390 218 aa18.3■□□□□ 0.52
BRAF-202ENST00000469930 CEACAM16Q2WEN9 425 aa18.3■□□□□ 0.52
BRAF-202ENST00000469930 ZNF474Q6S9Z5 364 aaPredicted RBP18.3■□□□□ 0.52
BRAF-202ENST00000469930 UBE2J2Q8N2K1 259 aa18.3■□□□□ 0.52
BRAF-202ENST00000469930 OR9Q1Q8NGQ5 310 aa18.3■□□□□ 0.52
BRAF-202ENST00000469930 ALKBH3Q96Q83 286 aaPredicted RBP18.3■□□□□ 0.52
BRAF-202ENST00000469930 USB1Q9BQ65 265 aaKnown RBP18.3■□□□□ 0.52
BRAF-202ENST00000469930 WACQ9BTA9 647 aa18.3■□□□□ 0.52
BRAF-202ENST00000469930 HDHD5Q9BXW7 423 aa18.3■□□□□ 0.52
BRAF-202ENST00000469930 OPN3Q9H1Y3 402 aaPredicted RBP18.3■□□□□ 0.52
BRAF-202ENST00000469930 MED20Q9H944 212 aa18.3■□□□□ 0.52
BRAF-202ENST00000469930 PLCXD1Q9NUJ7 323 aa18.3■□□□□ 0.52
BRAF-202ENST00000469930 MRPS18AQ9NVS2 196 aaKnown RBP18.3■□□□□ 0.52
BRAF-202ENST00000469930 TAS2R16Q9NYV7 291 aa18.3■□□□□ 0.52
BRAF-202ENST00000469930 COA3Q9Y2R0 106 aaPredicted RBP18.3■□□□□ 0.52
BRAF-202ENST00000469930 INTS1Q8N201 2190 aaKnown RBP18.3■□□□□ 0.52
BRAF-202ENST00000469930 CCDC182A6NF36 153 aa18.29■□□□□ 0.52
BRAF-202ENST00000469930 ENTPD6O75354 484 aa18.29■□□□□ 0.52
BRAF-202ENST00000469930 SMNDC1O75940 238 aaKnown RBP eCLIP18.29■□□□□ 0.52
BRAF-202ENST00000469930 ITGA5P08648 1049 aa18.29■□□□□ 0.52
BRAF-202ENST00000469930 TGFBR3Q03167 851 aa18.29■□□□□ 0.52
BRAF-202ENST00000469930 HSF2Q03933 536 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms