RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 MRPL37Q9BZE1 423 aaKnown RBP13.17□□□□□ -0.3
CHD3-205ENST00000449744 MS4A5Q9H3V2 200 aa13.17□□□□□ -0.3
CHD3-205ENST00000449744 C1orf198Q9H425 327 aa13.17□□□□□ -0.3
CHD3-205ENST00000449744 CDH20Q9HBT6 801 aa13.17□□□□□ -0.3
CHD3-205ENST00000449744 HIF3AQ9Y2N7 669 aa13.17□□□□□ -0.3
CHD3-205ENST00000449744 ZANQ9Y493 2812 aa13.17□□□□□ -0.3
CHD3-205ENST00000449744 IQCMA0A1B0GVH7 501 aa13.16□□□□□ -0.3
CHD3-205ENST00000449744 SLC22A23A1A5C7 686 aa13.16□□□□□ -0.3
CHD3-205ENST00000449744 NPIPB13A6NJU9 1138 aa13.16□□□□□ -0.3
CHD3-205ENST00000449744 NPIPB4C9JG80 1138 aa13.16□□□□□ -0.3
CHD3-205ENST00000449744 M0R233 179 aa13.16□□□□□ -0.3
CHD3-205ENST00000449744 SYNGR3O43761 229 aa13.16□□□□□ -0.3
CHD3-205ENST00000449744 STAMBPO95630 424 aa13.16□□□□□ -0.3
CHD3-205ENST00000449744 SERPINA1P01009 418 aa13.16□□□□□ -0.3
CHD3-205ENST00000449744 TSPAN19P0C672 248 aa13.16□□□□□ -0.3
CHD3-205ENST00000449744 IGHV4-31P0DP07 118 aa13.16□□□□□ -0.3
CHD3-205ENST00000449744 APEHP13798 732 aaKnown RBP13.16□□□□□ -0.3
CHD3-205ENST00000449744 ZNF16P17020 682 aaPredicted RBP13.16□□□□□ -0.3
CHD3-205ENST00000449744 GSK3BP49841 420 aa13.16□□□□□ -0.3
CHD3-205ENST00000449744 CD47Q08722 323 aa13.16□□□□□ -0.3
CHD3-205ENST00000449744 TOP3AQ13472 1001 aaPredicted RBP13.16□□□□□ -0.3
CHD3-205ENST00000449744 TAF11Q15544 211 aa13.16□□□□□ -0.3
CHD3-205ENST00000449744 ARMC4Q5T2S8 1044 aa13.16□□□□□ -0.3
CHD3-205ENST00000449744 HACD2Q6Y1H2 254 aa13.16□□□□□ -0.3
CHD3-205ENST00000449744 RRM2BQ7LG56 351 aa13.16□□□□□ -0.3
CHD3-205ENST00000449744 TREML1Q86YW5 311 aa13.16□□□□□ -0.3
CHD3-205ENST00000449744 ZNF584Q8IVC4 421 aa13.16□□□□□ -0.3
CHD3-205ENST00000449744 NRMQ8IXM6 262 aa13.16□□□□□ -0.3
CHD3-205ENST00000449744 LRRC18Q8N456 261 aa13.16□□□□□ -0.3
CHD3-205ENST00000449744 RBM15BQ8NDT2 890 aaKnown RBP13.16□□□□□ -0.3
CHD3-205ENST00000449744 OR1J2Q8NGS2 313 aa13.16□□□□□ -0.3
CHD3-205ENST00000449744 CMTM5Q96DZ9 223 aa13.16□□□□□ -0.3
CHD3-205ENST00000449744 SEPHS2Q99611 448 aa13.16□□□□□ -0.3
CHD3-205ENST00000449744 KCTD14Q9BQ13 255 aaPredicted RBP13.16□□□□□ -0.3
CHD3-205ENST00000449744 BPESC1Q9GZL8 116 aa13.16□□□□□ -0.3
CHD3-205ENST00000449744 FAM107BQ9H098 131 aa13.16□□□□□ -0.3
CHD3-205ENST00000449744 LRMDAQ9H2I8 198 aa13.16□□□□□ -0.3
CHD3-205ENST00000449744 TXNIPQ9H3M7 391 aa13.16□□□□□ -0.3
CHD3-205ENST00000449744 TPK1Q9H3S4 243 aa13.16□□□□□ -0.3
CHD3-205ENST00000449744 CCNB1IP1Q9NPC3 277 aa13.16□□□□□ -0.3
CHD3-205ENST00000449744 REV1Q9UBZ9 1251 aa13.16□□□□□ -0.3
CHD3-205ENST00000449744 DUSP13Q9UII6 198 aa13.16□□□□□ -0.3
CHD3-205ENST00000449744 SNX13Q9Y5W8 968 aa13.16□□□□□ -0.3
CHD3-205ENST00000449744 A0A1W2PPW3 197 aa13.15□□□□□ -0.3
CHD3-205ENST00000449744 GMNCA6NCL1 334 aa13.15□□□□□ -0.3
CHD3-205ENST00000449744 EFCAB9A8MZ26 197 aa13.15□□□□□ -0.3
CHD3-205ENST00000449744 J3KTA2 159 aa13.15□□□□□ -0.3
CHD3-205ENST00000449744 SLC2A10O95528 541 aa13.15□□□□□ -0.3
CHD3-205ENST00000449744 IFNA2P01563 188 aa13.15□□□□□ -0.3
CHD3-205ENST00000449744 FAM157BP0CG42 384 aa13.15□□□□□ -0.3
CHD3-205ENST00000449744 SELENOVP59797 346 aa13.15□□□□□ -0.3
CHD3-205ENST00000449744 CTXN1P60606 82 aa13.15□□□□□ -0.3
CHD3-205ENST00000449744 RPL27P61353 136 aaKnown RBP13.15□□□□□ -0.3
CHD3-205ENST00000449744 HSF2Q03933 536 aa13.15□□□□□ -0.3
CHD3-205ENST00000449744 FXNQ16595 210 aa13.15□□□□□ -0.3
CHD3-205ENST00000449744 MSMPQ1L6U9 139 aa13.15□□□□□ -0.3
CHD3-205ENST00000449744 TBC1D28Q2M2D7 210 aa13.15□□□□□ -0.3
CHD3-205ENST00000449744 C10orf128Q5T292 105 aa13.15□□□□□ -0.3
CHD3-205ENST00000449744 RGS7BPQ6MZT1 257 aaPredicted RBP13.15□□□□□ -0.3
CHD3-205ENST00000449744 C8orf82Q6P1X6 216 aaPredicted RBP13.15□□□□□ -0.3
CHD3-205ENST00000449744 ZNF730Q6ZMV8 503 aa13.15□□□□□ -0.3
CHD3-205ENST00000449744 OAFQ86UD1 273 aa13.15□□□□□ -0.3
CHD3-205ENST00000449744 CYP4Z1Q86W10 505 aa13.15□□□□□ -0.3
CHD3-205ENST00000449744 RNF113BQ8IZP6 322 aaKnown RBP13.15□□□□□ -0.3
CHD3-205ENST00000449744 OR51A7Q8NH64 312 aa13.15□□□□□ -0.3
CHD3-205ENST00000449744 FNDC8Q8TC99 324 aa13.15□□□□□ -0.3
CHD3-205ENST00000449744 UBASH3BQ8TF42 649 aa13.15□□□□□ -0.3
CHD3-205ENST00000449744 NSMAFQ92636 917 aa13.15□□□□□ -0.3
CHD3-205ENST00000449744 HDAC2Q92769 488 aaKnown RBP13.15□□□□□ -0.3
CHD3-205ENST00000449744 HSH2DQ96JZ2 352 aa13.15□□□□□ -0.3
CHD3-205ENST00000449744 RBP7Q96R05 134 aa13.15□□□□□ -0.3
CHD3-205ENST00000449744 NSRP1Q9H0G5 558 aaKnown RBP13.15□□□□□ -0.3
CHD3-205ENST00000449744 SIAEQ9HAT2 523 aa13.15□□□□□ -0.3
CHD3-205ENST00000449744 SMURF2Q9HAU4 748 aa13.15□□□□□ -0.3
CHD3-205ENST00000449744 CDC42EP3Q9UKI2 254 aa13.15□□□□□ -0.3
CHD3-205ENST00000449744 ZNF346Q9UL40 294 aaKnown RBP13.15□□□□□ -0.3
CHD3-205ENST00000449744 FZR1Q9UM11 496 aa13.15□□□□□ -0.3
CHD3-205ENST00000449744 SONP18583 2426 aaKnown RBP13.14□□□□□ -0.31
CHD3-205ENST00000449744 IGHV4-61A0A0C4DH41 118 aa13.14□□□□□ -0.31
CHD3-205ENST00000449744 LMX1BO60663 402 aa13.14□□□□□ -0.31
CHD3-205ENST00000449744 CCL2P13500 99 aa13.14□□□□□ -0.31
CHD3-205ENST00000449744 NCK1P16333 377 aa13.14□□□□□ -0.31
CHD3-205ENST00000449744 MAKP20794 623 aa13.14□□□□□ -0.31
CHD3-205ENST00000449744 APLNRP35414 380 aa13.14□□□□□ -0.31
CHD3-205ENST00000449744 GUCA1AP43080 201 aaPredicted RBP13.14□□□□□ -0.31
CHD3-205ENST00000449744 ZNF133P52736 654 aaPredicted RBP13.14□□□□□ -0.31
CHD3-205ENST00000449744 SEC24CP53992 1094 aa13.14□□□□□ -0.31
CHD3-205ENST00000449744 PSME3P61289 254 aa13.14□□□□□ -0.31
CHD3-205ENST00000449744 MRPS34P82930 218 aaKnown RBP13.14□□□□□ -0.31
CHD3-205ENST00000449744 PRKCDQ05655 676 aa13.14□□□□□ -0.31
CHD3-205ENST00000449744 FMODQ06828 376 aa13.14□□□□□ -0.31
CHD3-205ENST00000449744 SGCAQ16586 387 aa13.14□□□□□ -0.31
CHD3-205ENST00000449744 ANKDD1AQ495B1 522 aa13.14□□□□□ -0.31
CHD3-205ENST00000449744 FAM205BPQ63HN1 556 aa13.14□□□□□ -0.31
CHD3-205ENST00000449744 PODNL1Q6PEZ8 512 aa13.14□□□□□ -0.31
CHD3-205ENST00000449744 IGFN1Q86VF2 1251 aa13.14□□□□□ -0.31
CHD3-205ENST00000449744 ZNF786Q8N393 782 aa13.14□□□□□ -0.31
CHD3-205ENST00000449744 ACOT11Q8WXI4 607 aaPredicted RBP13.14□□□□□ -0.31
CHD3-205ENST00000449744 ALG12Q9BV10 488 aa13.14□□□□□ -0.31
CHD3-205ENST00000449744 OR51B6Q9H340 312 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms