RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 TSPAN19P0C672 248 aa15.24■□□□□ 0.03
DDX56-207ENST00000448192 SAGP10523 405 aaPredicted RBP15.24■□□□□ 0.03
DDX56-207ENST00000448192 CCL2P13500 99 aa15.24■□□□□ 0.03
DDX56-207ENST00000448192 EVX1P49640 407 aa15.24■□□□□ 0.03
DDX56-207ENST00000448192 RPS23P62266 143 aaKnown RBP15.24■□□□□ 0.03
DDX56-207ENST00000448192 CD47Q08722 323 aa15.24■□□□□ 0.03
DDX56-207ENST00000448192 TRAM2Q15035 370 aa15.24■□□□□ 0.03
DDX56-207ENST00000448192 CHRFAM7AQ494W8 412 aa15.24■□□□□ 0.03
DDX56-207ENST00000448192 IFI44LQ53G44 452 aa15.24■□□□□ 0.03
DDX56-207ENST00000448192 ARMC4Q5T2S8 1044 aa15.24■□□□□ 0.03
DDX56-207ENST00000448192 DPPA2Q7Z7J5 298 aa15.24■□□□□ 0.03
DDX56-207ENST00000448192 LRP11Q86VZ4 500 aa15.24■□□□□ 0.03
DDX56-207ENST00000448192 NRMQ8IXM6 262 aa15.24■□□□□ 0.03
DDX56-207ENST00000448192 OFCC1Q8IZS5 231 aa15.24■□□□□ 0.03
DDX56-207ENST00000448192 ZNF540Q8NDQ6 660 aa15.24■□□□□ 0.03
DDX56-207ENST00000448192 GEMIN6Q8WXD5 167 aaKnown RBP15.24■□□□□ 0.03
DDX56-207ENST00000448192 HDAC2Q92769 488 aaKnown RBP15.24■□□□□ 0.03
DDX56-207ENST00000448192 SEPHS2Q99611 448 aa15.24■□□□□ 0.03
DDX56-207ENST00000448192 MDFIQ99750 246 aa15.24■□□□□ 0.03
DDX56-207ENST00000448192 BPESC1Q9GZL8 116 aa15.24■□□□□ 0.03
DDX56-207ENST00000448192 TXNIPQ9H3M7 391 aa15.24■□□□□ 0.03
DDX56-207ENST00000448192 CDH20Q9HBT6 801 aa15.24■□□□□ 0.03
DDX56-207ENST00000448192 REV1Q9UBZ9 1251 aa15.24■□□□□ 0.03
DDX56-207ENST00000448192 SLC7A8Q9UHI5 535 aa15.24■□□□□ 0.03
DDX56-207ENST00000448192 DUSP13Q9UII6 198 aa15.24■□□□□ 0.03
DDX56-207ENST00000448192 DNHD1Q96M86 4753 aa15.23■□□□□ 0.03
DDX56-207ENST00000448192 HTR3EA5X5Y0 456 aa15.23■□□□□ 0.03
DDX56-207ENST00000448192 M0R233 179 aa15.23■□□□□ 0.03
DDX56-207ENST00000448192 STAMBPO95630 424 aa15.23■□□□□ 0.03
DDX56-207ENST00000448192 FAM157BP0CG42 384 aa15.23■□□□□ 0.03
DDX56-207ENST00000448192 APEHP13798 732 aaKnown RBP15.23■□□□□ 0.03
DDX56-207ENST00000448192 NCK1P16333 377 aa15.23■□□□□ 0.03
DDX56-207ENST00000448192 MAKP20794 623 aa15.23■□□□□ 0.03
DDX56-207ENST00000448192 GZMKP49863 264 aa15.23■□□□□ 0.03
DDX56-207ENST00000448192 SEC24CP53992 1094 aa15.23■□□□□ 0.03
DDX56-207ENST00000448192 PLP2Q04941 152 aa15.23■□□□□ 0.03
DDX56-207ENST00000448192 FMODQ06828 376 aa15.23■□□□□ 0.03
DDX56-207ENST00000448192 FXNQ16595 210 aa15.23■□□□□ 0.03
DDX56-207ENST00000448192 NRN1LQ496H8 165 aa15.23■□□□□ 0.03
DDX56-207ENST00000448192 C10orf128Q5T292 105 aa15.23■□□□□ 0.03
DDX56-207ENST00000448192 C8orf82Q6P1X6 216 aaPredicted RBP15.23■□□□□ 0.03
DDX56-207ENST00000448192 HACD2Q6Y1H2 254 aa15.23■□□□□ 0.03
DDX56-207ENST00000448192 CBLL1Q75N03 491 aa15.23■□□□□ 0.03
DDX56-207ENST00000448192 IGFN1Q86VF2 1251 aa15.23■□□□□ 0.03
DDX56-207ENST00000448192 PAQR4Q8N4S7 273 aaPredicted RBP15.23■□□□□ 0.03
DDX56-207ENST00000448192 RBM15BQ8NDT2 890 aaKnown RBP15.23■□□□□ 0.03
DDX56-207ENST00000448192 OR51A7Q8NH64 312 aa15.23■□□□□ 0.03
DDX56-207ENST00000448192 UBASH3BQ8TF42 649 aa15.23■□□□□ 0.03
DDX56-207ENST00000448192 NSMAFQ92636 917 aa15.23■□□□□ 0.03
DDX56-207ENST00000448192 FAM162AQ96A26 154 aa15.23■□□□□ 0.03
DDX56-207ENST00000448192 HSH2DQ96JZ2 352 aa15.23■□□□□ 0.03
DDX56-207ENST00000448192 KCTD14Q9BQ13 255 aaPredicted RBP15.23■□□□□ 0.03
DDX56-207ENST00000448192 FAM107BQ9H098 131 aa15.23■□□□□ 0.03
DDX56-207ENST00000448192 KCNN2Q9H2S1 579 aa15.23■□□□□ 0.03
DDX56-207ENST00000448192 OR51B6Q9H340 312 aa15.23■□□□□ 0.03
DDX56-207ENST00000448192 MAN2C1Q9NTJ4 1040 aa15.23■□□□□ 0.03
DDX56-207ENST00000448192 HIF3AQ9Y2N7 669 aa15.23■□□□□ 0.03
DDX56-207ENST00000448192 TRAV27A0A087WT01 109 aa15.22■□□□□ 0.03
DDX56-207ENST00000448192 IQCMA0A1B0GVH7 501 aa15.22■□□□□ 0.03
DDX56-207ENST00000448192 NPIPB13A6NJU9 1138 aa15.22■□□□□ 0.03
DDX56-207ENST00000448192 EFCAB9A8MZ26 197 aa15.22■□□□□ 0.03
DDX56-207ENST00000448192 NPIPB4C9JG80 1138 aa15.22■□□□□ 0.03
DDX56-207ENST00000448192 LYNX1G3V0Z9 82 aa15.22■□□□□ 0.03
DDX56-207ENST00000448192 NDUFAB1O14561 156 aa15.22■□□□□ 0.03
DDX56-207ENST00000448192 FFAR1O14842 300 aa15.22■□□□□ 0.03
DDX56-207ENST00000448192 PTHP01270 115 aa15.22■□□□□ 0.03
DDX56-207ENST00000448192 LYNX1P0DP58 116 aa15.22■□□□□ 0.03
DDX56-207ENST00000448192 TCN1P20061 433 aaPredicted RBP15.22■□□□□ 0.03
DDX56-207ENST00000448192 CDAP32320 146 aa15.22■□□□□ 0.03
DDX56-207ENST00000448192 ALDH3B1P43353 468 aa15.22■□□□□ 0.03
DDX56-207ENST00000448192 ZNF133P52736 654 aaPredicted RBP15.22■□□□□ 0.03
DDX56-207ENST00000448192 CTXN1P60606 82 aa15.22■□□□□ 0.03
DDX56-207ENST00000448192 PSME3P61289 254 aa15.22■□□□□ 0.03
DDX56-207ENST00000448192 PRKCDQ05655 676 aa15.22■□□□□ 0.03
DDX56-207ENST00000448192 MAD2L1BPQ15013 274 aaPredicted RBP15.22■□□□□ 0.03
DDX56-207ENST00000448192 SGCAQ16586 387 aa15.22■□□□□ 0.03
DDX56-207ENST00000448192 TBC1D28Q2M2D7 210 aa15.22■□□□□ 0.03
DDX56-207ENST00000448192 ZNF730Q6ZMV8 503 aa15.22■□□□□ 0.03
DDX56-207ENST00000448192 CMTM5Q96DZ9 223 aa15.22■□□□□ 0.03
DDX56-207ENST00000448192 MS4A5Q9H3V2 200 aa15.22■□□□□ 0.03
DDX56-207ENST00000448192 C1orf198Q9H425 327 aa15.22■□□□□ 0.03
DDX56-207ENST00000448192 MYEF2Q9P2K5 600 aaKnown RBP15.22■□□□□ 0.03
DDX56-207ENST00000448192 RTTNQ86VV8 2226 aa15.22■□□□□ 0.03
DDX56-207ENST00000448192 MALRD1Q5VYJ5 2156 aa15.22■□□□□ 0.03
DDX56-207ENST00000448192 IGKV1D-43A0A0B4J1Z2 117 aa15.21■□□□□ 0.03
DDX56-207ENST00000448192 LOC100289279A0A1B0GTE1 492 aa15.21■□□□□ 0.03
DDX56-207ENST00000448192 A0A1W2PPW3 197 aa15.21■□□□□ 0.03
DDX56-207ENST00000448192 ATP8B1O43520 1251 aa15.21■□□□□ 0.03
DDX56-207ENST00000448192 NR2C1P13056 603 aa15.21■□□□□ 0.03
DDX56-207ENST00000448192 ZNF23P17027 643 aa15.21■□□□□ 0.03
DDX56-207ENST00000448192 GIFP27352 417 aa15.21■□□□□ 0.03
DDX56-207ENST00000448192 RPL27P61353 136 aaKnown RBP15.21■□□□□ 0.03
DDX56-207ENST00000448192 MRPS34P82930 218 aaKnown RBP15.21■□□□□ 0.03
DDX56-207ENST00000448192 HSF2Q03933 536 aa15.21■□□□□ 0.03
DDX56-207ENST00000448192 TAF11Q15544 211 aa15.21■□□□□ 0.03
DDX56-207ENST00000448192 RGS7BPQ6MZT1 257 aaPredicted RBP15.21■□□□□ 0.03
DDX56-207ENST00000448192 TBPL2Q6SJ96 375 aa15.21■□□□□ 0.03
DDX56-207ENST00000448192 OAFQ86UD1 273 aa15.21■□□□□ 0.03
DDX56-207ENST00000448192 CYP4Z1Q86W10 505 aa15.21■□□□□ 0.03
DDX56-207ENST00000448192 ZNF786Q8N393 782 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms