RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 RHNO1Q9BSD3 238 aa9.09□□□□□ -0.95
MCF2L-216ENST00000439475 C1orf21Q9H246 121 aa9.09□□□□□ -0.95
MCF2L-216ENST00000439475 ZNF442Q9H7R0 627 aa9.09□□□□□ -0.95
MCF2L-216ENST00000439475 SIAEQ9HAT2 523 aa9.09□□□□□ -0.95
MCF2L-216ENST00000439475 CCNB1IP1Q9NPC3 277 aa9.09□□□□□ -0.95
MCF2L-216ENST00000439475 IL1RAPQ9NPH3 570 aa9.09□□□□□ -0.95
MCF2L-216ENST00000439475 FAM53CQ9NYF3 392 aa9.09□□□□□ -0.95
MCF2L-216ENST00000439475 TEX15Q9BXT5 2789 aa9.08□□□□□ -0.96
MCF2L-216ENST00000439475 H7C1Q1 480 aa9.08□□□□□ -0.96
MCF2L-216ENST00000439475 SSX4O60224 188 aa9.08□□□□□ -0.96
MCF2L-216ENST00000439475 OR10H3O60404 316 aa9.08□□□□□ -0.96
MCF2L-216ENST00000439475 DIRAS1O95057 198 aa9.08□□□□□ -0.96
MCF2L-216ENST00000439475 ERCC1P07992 297 aaPredicted RBP9.08□□□□□ -0.96
MCF2L-216ENST00000439475 CELA3BP08861 270 aa9.08□□□□□ -0.96
MCF2L-216ENST00000439475 OR4A8P0C604 315 aa9.08□□□□□ -0.96
MCF2L-216ENST00000439475 CALCRP30988 508 aa9.08□□□□□ -0.96
MCF2L-216ENST00000439475 RPS6KA3P51812 740 aa9.08□□□□□ -0.96
MCF2L-216ENST00000439475 NUDT6P53370 316 aa9.08□□□□□ -0.96
MCF2L-216ENST00000439475 RPS23P62266 143 aaKnown RBP9.08□□□□□ -0.96
MCF2L-216ENST00000439475 MRPS34P82930 218 aaKnown RBP9.08□□□□□ -0.96
MCF2L-216ENST00000439475 RUNX1T1Q06455 604 aa9.08□□□□□ -0.96
MCF2L-216ENST00000439475 TRIM25Q14258 630 aaKnown RBP9.08□□□□□ -0.96
MCF2L-216ENST00000439475 RAB39AQ14964 217 aa9.08□□□□□ -0.96
MCF2L-216ENST00000439475 SGCAQ16586 387 aa9.08□□□□□ -0.96
MCF2L-216ENST00000439475 GPR139Q6DWJ6 353 aa9.08□□□□□ -0.96
MCF2L-216ENST00000439475 C11orf71Q6IPW1 123 aa9.08□□□□□ -0.96
MCF2L-216ENST00000439475 SLC25A47Q6Q0C1 308 aa9.08□□□□□ -0.96
MCF2L-216ENST00000439475 UNQ6126/PRO20091Q6UXV3 157 aa9.08□□□□□ -0.96
MCF2L-216ENST00000439475 CYP2R1Q6VVX0 501 aa9.08□□□□□ -0.96
MCF2L-216ENST00000439475 TRPM8Q7Z2W7 1104 aa9.08□□□□□ -0.96
MCF2L-216ENST00000439475 TSEN54Q7Z6J9 526 aaKnown RBP9.08□□□□□ -0.96
MCF2L-216ENST00000439475 IGFN1Q86VF2 1251 aa9.08□□□□□ -0.96
MCF2L-216ENST00000439475 ZDHHC21Q8IVQ6 265 aa9.08□□□□□ -0.96
MCF2L-216ENST00000439475 WDFY1Q8IWB7 410 aa9.08□□□□□ -0.96
MCF2L-216ENST00000439475 ALDH16A1Q8IZ83 802 aa9.08□□□□□ -0.96
MCF2L-216ENST00000439475 OR13C2Q8NGS9 318 aa9.08□□□□□ -0.96
MCF2L-216ENST00000439475 NSMAFQ92636 917 aa9.08□□□□□ -0.96
MCF2L-216ENST00000439475 FAM46AQ96IP4 442 aaKnown RBP9.08□□□□□ -0.96
MCF2L-216ENST00000439475 DHRS1Q96LJ7 313 aa9.08□□□□□ -0.96
MCF2L-216ENST00000439475 KCNK17Q96T54 332 aa9.08□□□□□ -0.96
MCF2L-216ENST00000439475 SEPHS2Q99611 448 aa9.08□□□□□ -0.96
MCF2L-216ENST00000439475 WACQ9BTA9 647 aa9.08□□□□□ -0.96
MCF2L-216ENST00000439475 SEC61A2Q9H9S3 476 aa9.08□□□□□ -0.96
MCF2L-216ENST00000439475 CDH20Q9HBT6 801 aa9.08□□□□□ -0.96
MCF2L-216ENST00000439475 DLL4Q9NR61 685 aa9.08□□□□□ -0.96
MCF2L-216ENST00000439475 SLC7A8Q9UHI5 535 aa9.08□□□□□ -0.96
MCF2L-216ENST00000439475 CMAHPQ9Y471 501 aa9.08□□□□□ -0.96
MCF2L-216ENST00000439475 FKBP7Q9Y680 259 aa9.08□□□□□ -0.96
MCF2L-216ENST00000439475 F8P00451 2351 aa9.07□□□□□ -0.96
MCF2L-216ENST00000439475 IGHV2OR16-5A0A0B4J2B6 119 aa9.07□□□□□ -0.96
MCF2L-216ENST00000439475 TRBV4-1A0A0J9YWV2 114 aa9.07□□□□□ -0.96
MCF2L-216ENST00000439475 SH3PXD2BA1X283 911 aa9.07□□□□□ -0.96
MCF2L-216ENST00000439475 UNC119BA6NIH7 251 aa9.07□□□□□ -0.96
MCF2L-216ENST00000439475 H7C417 338 aa9.07□□□□□ -0.96
MCF2L-216ENST00000439475 PTP4A3O75365 173 aa9.07□□□□□ -0.96
MCF2L-216ENST00000439475 SEMG1P04279 462 aa9.07□□□□□ -0.96
MCF2L-216ENST00000439475 CSF3P09919 207 aa9.07□□□□□ -0.96
MCF2L-216ENST00000439475 ZNF14P17017 642 aaPredicted RBP9.07□□□□□ -0.96
MCF2L-216ENST00000439475 FUT4P22083 530 aa9.07□□□□□ -0.96
MCF2L-216ENST00000439475 NR4A1P22736 598 aa9.07□□□□□ -0.96
MCF2L-216ENST00000439475 RRM2P31350 389 aa9.07□□□□□ -0.96
MCF2L-216ENST00000439475 APLNRP35414 380 aa9.07□□□□□ -0.96
MCF2L-216ENST00000439475 GLRXP35754 106 aa9.07□□□□□ -0.96
MCF2L-216ENST00000439475 OMPP47874 163 aa9.07□□□□□ -0.96
MCF2L-216ENST00000439475 RIPPLY3P57055 190 aa9.07□□□□□ -0.96
MCF2L-216ENST00000439475 SELENOVP59797 346 aa9.07□□□□□ -0.96
MCF2L-216ENST00000439475 PCBD1P61457 104 aa9.07□□□□□ -0.96
MCF2L-216ENST00000439475 ERVK-25P63136 954 aa9.07□□□□□ -0.96
MCF2L-216ENST00000439475 HSF2Q03933 536 aa9.07□□□□□ -0.96
MCF2L-216ENST00000439475 HGFACQ04756 655 aa9.07□□□□□ -0.96
MCF2L-216ENST00000439475 SNTB2Q13425 540 aaKnown RBP9.07□□□□□ -0.96
MCF2L-216ENST00000439475 EFNB3Q15768 340 aa9.07□□□□□ -0.96
MCF2L-216ENST00000439475 SWI5Q1ZZU3 235 aa9.07□□□□□ -0.96
MCF2L-216ENST00000439475 TBC1D28Q2M2D7 210 aa9.07□□□□□ -0.96
MCF2L-216ENST00000439475 FAM98BQ52LJ0 330 aaKnown RBP9.07□□□□□ -0.96
MCF2L-216ENST00000439475 KRT80Q6KB66 452 aa9.07□□□□□ -0.96
MCF2L-216ENST00000439475 CLEC2AQ6UVW9 174 aa9.07□□□□□ -0.96
MCF2L-216ENST00000439475 DPY19L2P2Q6ZN68 376 aa9.07□□□□□ -0.96
MCF2L-216ENST00000439475 RINLQ6ZS11 566 aa9.07□□□□□ -0.96
MCF2L-216ENST00000439475 MEX3DQ86XN8 651 aaKnown RBP9.07□□□□□ -0.96
MCF2L-216ENST00000439475 LRRC18Q8N456 261 aa9.07□□□□□ -0.96
MCF2L-216ENST00000439475 FAM86B1Q8N7N1 296 aa9.07□□□□□ -0.96
MCF2L-216ENST00000439475 GNPDA2Q8TDQ7 276 aa9.07□□□□□ -0.96
MCF2L-216ENST00000439475 RSRC1Q96IZ7 334 aaKnown RBP9.07□□□□□ -0.96
MCF2L-216ENST00000439475 ZNF570Q96NI8 536 aa9.07□□□□□ -0.96
MCF2L-216ENST00000439475 TSPAN32Q96QS1 320 aa9.07□□□□□ -0.96
MCF2L-216ENST00000439475 SH3GL3Q99963 347 aa9.07□□□□□ -0.96
MCF2L-216ENST00000439475 VRK1Q99986 396 aaPredicted RBP9.07□□□□□ -0.96
MCF2L-216ENST00000439475 THTPAQ9BU02 230 aa9.07□□□□□ -0.96
MCF2L-216ENST00000439475 TRIM15Q9C019 465 aa9.07□□□□□ -0.96
MCF2L-216ENST00000439475 RAB1BQ9H0U4 201 aa9.07□□□□□ -0.96
MCF2L-216ENST00000439475 PLK3Q9H4B4 646 aa9.07□□□□□ -0.96
MCF2L-216ENST00000439475 MAGIXQ9H6Y5 334 aa9.07□□□□□ -0.96
MCF2L-216ENST00000439475 NOX3Q9HBY0 568 aa9.07□□□□□ -0.96
MCF2L-216ENST00000439475 TAS2R1Q9NYW7 299 aa9.07□□□□□ -0.96
MCF2L-216ENST00000439475 GDF2Q9UK05 429 aaPredicted RBP9.07□□□□□ -0.96
MCF2L-216ENST00000439475 SIGLEC7Q9Y286 467 aa9.07□□□□□ -0.96
MCF2L-216ENST00000439475 DCHS2Q6V1P9 2916 aa9.07□□□□□ -0.96
MCF2L-216ENST00000439475 ZNF503-AS2A6NEH8 195 aa9.06□□□□□ -0.96
MCF2L-216ENST00000439475 TRIM64A6NGJ6 449 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms