RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 TMED1Q13445 227 aa14.9□□□□□ -0.02
SSB-202ENST00000409333 KLHL22Q53GT1 634 aa14.9□□□□□ -0.02
SSB-202ENST00000409333 OTPQ5XKR4 325 aa14.9□□□□□ -0.02
SSB-202ENST00000409333 NSUN5P2Q63ZY6 315 aa14.9□□□□□ -0.02
SSB-202ENST00000409333 TMEM154Q6P9G4 183 aa14.9□□□□□ -0.02
SSB-202ENST00000409333 LRFN4Q6PJG9 635 aa14.9□□□□□ -0.02
SSB-202ENST00000409333 ZNF773Q6PK81 442 aa14.9□□□□□ -0.02
SSB-202ENST00000409333 C20orf196Q8IYI0 205 aa14.9□□□□□ -0.02
SSB-202ENST00000409333 GCNT2Q8N0V5 402 aa14.9□□□□□ -0.02
SSB-202ENST00000409333 SMAP2Q8WU79 429 aaPredicted RBP14.9□□□□□ -0.02
SSB-202ENST00000409333 EXOGQ9Y2C4 368 aaKnown RBP14.9□□□□□ -0.02
SSB-202ENST00000409333 FAM215AQ9Y5M1 114 aa14.9□□□□□ -0.02
SSB-202ENST00000409333 TVP23AA6NH52 213 aa14.89□□□□□ -0.03
SSB-202ENST00000409333 SELENOFO60613 162 aa14.89□□□□□ -0.03
SSB-202ENST00000409333 MRPL33O75394 65 aaKnown RBP14.89□□□□□ -0.03
SSB-202ENST00000409333 UPK3AO75631 287 aa14.89□□□□□ -0.03
SSB-202ENST00000409333 GABRA1P14867 456 aa14.89□□□□□ -0.03
SSB-202ENST00000409333 ATP6V1E1P36543 226 aa14.89□□□□□ -0.03
SSB-202ENST00000409333 NAA10P41227 235 aaPredicted RBP14.89□□□□□ -0.03
SSB-202ENST00000409333 DNM1P34Q6PK57 102 aa14.89□□□□□ -0.03
SSB-202ENST00000409333 SLC25A47Q6Q0C1 308 aa14.89□□□□□ -0.03
SSB-202ENST00000409333 C3P1Q6ZMU1 363 aa14.89□□□□□ -0.03
SSB-202ENST00000409333 SEM1Q6ZVN7 128 aa14.89□□□□□ -0.03
SSB-202ENST00000409333 PRSS48Q7RTY5 328 aa14.89□□□□□ -0.03
SSB-202ENST00000409333 NUFIP2Q7Z417 695 aaKnown RBP14.89□□□□□ -0.03
SSB-202ENST00000409333 RPRMLQ8N4K4 120 aa14.89□□□□□ -0.03
SSB-202ENST00000409333 WNT2BQ93097 391 aa14.89□□□□□ -0.03
SSB-202ENST00000409333 TMEM80Q96HE8 168 aa14.89□□□□□ -0.03
SSB-202ENST00000409333 GMPPAQ96IJ6 420 aaPredicted RBP14.89□□□□□ -0.03
SSB-202ENST00000409333 FGF20Q9NP95 211 aaPredicted RBP14.89□□□□□ -0.03
SSB-202ENST00000409333 SCOCQ9UIL1 159 aa14.89□□□□□ -0.03
SSB-202ENST00000409333 A0A087WXM4 84 aa14.88□□□□□ -0.03
SSB-202ENST00000409333 CD8B2A6NJW9 211 aa14.88□□□□□ -0.03
SSB-202ENST00000409333 J3QRE1 110 aa14.88□□□□□ -0.03
SSB-202ENST00000409333 SS18L1O75177 396 aaPredicted RBP14.88□□□□□ -0.03
SSB-202ENST00000409333 KHDRBS3O75525 346 aaKnown RBP14.88□□□□□ -0.03
SSB-202ENST00000409333 RAB36O95755 333 aa14.88□□□□□ -0.03
SSB-202ENST00000409333 FADS2O95864 444 aaKnown RBP14.88□□□□□ -0.03
SSB-202ENST00000409333 IGHV3-9P01782 118 aa14.88□□□□□ -0.03
SSB-202ENST00000409333 TFP02787 698 aa14.88□□□□□ -0.03
SSB-202ENST00000409333 SBK2P0C263 348 aa14.88□□□□□ -0.03
SSB-202ENST00000409333 EDN3P14138 238 aa14.88□□□□□ -0.03
SSB-202ENST00000409333 NFATC3Q12968 1075 aa14.88□□□□□ -0.03
SSB-202ENST00000409333 C1orf185Q5T7R7 199 aa14.88□□□□□ -0.03
SSB-202ENST00000409333 SPARTQ8N0X7 666 aa14.88□□□□□ -0.03
SSB-202ENST00000409333 CPT1CQ8TCG5 803 aa14.88□□□□□ -0.03
SSB-202ENST00000409333 WBP1Q96G27 269 aa14.88□□□□□ -0.03
SSB-202ENST00000409333 ALKBH3Q96Q83 286 aaPredicted RBP14.88□□□□□ -0.03
SSB-202ENST00000409333 CNN2Q99439 309 aaKnown RBP14.88□□□□□ -0.03
SSB-202ENST00000409333 MRPS26Q9BYN8 205 aaKnown RBP14.88□□□□□ -0.03
SSB-202ENST00000409333 C12orf49Q9H741 205 aa14.88□□□□□ -0.03
SSB-202ENST00000409333 GP6Q9HCN6 339 aa14.88□□□□□ -0.03
SSB-202ENST00000409333 DIMT1Q9UNQ2 313 aaKnown RBP14.88□□□□□ -0.03
SSB-202ENST00000409333 IRGMA1A4Y4 181 aa14.88□□□□□ -0.03
SSB-202ENST00000409333 MBD3L4A6NDZ8 208 aaPredicted RBP14.88□□□□□ -0.03
SSB-202ENST00000409333 MBD3L3A6NE82 208 aaPredicted RBP14.88□□□□□ -0.03
SSB-202ENST00000409333 MBD3L5A6NJ08 208 aaPredicted RBP14.88□□□□□ -0.03
SSB-202ENST00000409333 SLC19A2O60779 497 aa14.88□□□□□ -0.03
SSB-202ENST00000409333 MPZL1O95297 269 aa14.88□□□□□ -0.03
SSB-202ENST00000409333 HLA-DQA2P01906 255 aa14.88□□□□□ -0.03
SSB-202ENST00000409333 PSKH1P11801 424 aa14.88□□□□□ -0.03
SSB-202ENST00000409333 MAP2K4P45985 399 aa14.88□□□□□ -0.03
SSB-202ENST00000409333 HCCSP53701 268 aa14.88□□□□□ -0.03
SSB-202ENST00000409333 GLO1Q04760 184 aa14.88□□□□□ -0.03
SSB-202ENST00000409333 SF3B4Q15427 424 aaKnown RBP eCLIP14.88□□□□□ -0.033e-7■■■■□ 19.3
SSB-202ENST00000409333 GUSBP1Q15486 140 aa14.88□□□□□ -0.03
SSB-202ENST00000409333 MEP1BQ16820 701 aa14.88□□□□□ -0.03
SSB-202ENST00000409333 TSPO2Q5TGU0 170 aa14.88□□□□□ -0.03
SSB-202ENST00000409333 LINGO2Q7L985 606 aa14.88□□□□□ -0.03
SSB-202ENST00000409333 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.88□□□□□ -0.03
SSB-202ENST00000409333 ERI1Q8IV48 349 aaKnown RBP14.88□□□□□ -0.03
SSB-202ENST00000409333 POMGNT2Q8NAT1 580 aa14.88□□□□□ -0.03
SSB-202ENST00000409333 MBD3L2Q8NHZ7 208 aaPredicted RBP14.88□□□□□ -0.03
SSB-202ENST00000409333 FNDC8Q8TC99 324 aa14.88□□□□□ -0.03
SSB-202ENST00000409333 ZNF837Q96EG3 531 aaPredicted RBP14.88□□□□□ -0.03
SSB-202ENST00000409333 TBX5Q99593 518 aa14.88□□□□□ -0.03
SSB-202ENST00000409333 ULBP2Q9BZM5 246 aa14.88□□□□□ -0.03
SSB-202ENST00000409333 WDR76Q9H967 626 aa14.88□□□□□ -0.03
SSB-202ENST00000409333 PARPBPQ9NWS1 579 aa14.88□□□□□ -0.03
SSB-202ENST00000409333 MRPL22Q9NWU5 206 aaKnown RBP14.88□□□□□ -0.03
SSB-202ENST00000409333 ZNF835Q9Y2P0 537 aa14.88□□□□□ -0.03
SSB-202ENST00000409333 SNX5Q9Y5X3 404 aa14.88□□□□□ -0.03
SSB-202ENST00000409333 A0A1W2PPL8 197 aa14.87□□□□□ -0.03
SSB-202ENST00000409333 TRIM64CA6NLI5 447 aa14.87□□□□□ -0.03
SSB-202ENST00000409333 PRRG2O14669 202 aa14.87□□□□□ -0.03
SSB-202ENST00000409333 IGHA1P01876 353 aa14.87□□□□□ -0.03
SSB-202ENST00000409333 GAAP10253 952 aa14.87□□□□□ -0.03
SSB-202ENST00000409333 NR2C1P13056 603 aa14.87□□□□□ -0.03
SSB-202ENST00000409333 DCKP27707 260 aa14.87□□□□□ -0.03
SSB-202ENST00000409333 PTGER4P35408 488 aa14.87□□□□□ -0.03
SSB-202ENST00000409333 RPS27P42677 84 aaKnown RBP14.87□□□□□ -0.03
SSB-202ENST00000409333 ZNF133P52736 654 aaPredicted RBP14.87□□□□□ -0.03
SSB-202ENST00000409333 POU4F2Q12837 409 aa14.87□□□□□ -0.03
SSB-202ENST00000409333 C10orf128Q5T292 105 aa14.87□□□□□ -0.03
SSB-202ENST00000409333 DOLPP1Q86YN1 238 aa14.87□□□□□ -0.03
SSB-202ENST00000409333 TIGD4Q8IY51 512 aa14.87□□□□□ -0.03
SSB-202ENST00000409333 GPR137CQ8N3F9 429 aa14.87□□□□□ -0.03
SSB-202ENST00000409333 RFLNBQ8N5W9 214 aa14.87□□□□□ -0.03
SSB-202ENST00000409333 HTRA1Q92743 480 aa14.87□□□□□ -0.03
SSB-202ENST00000409333 INTS12Q96CB8 462 aaKnown RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms