RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 DPPA2Q7Z7J5 298 aa13.21□□□□□ -0.29
TPM1-207ENST00000403994 LRP11Q86VZ4 500 aa13.21□□□□□ -0.29
TPM1-207ENST00000403994 OFCC1Q8IZS5 231 aa13.21□□□□□ -0.29
TPM1-207ENST00000403994 ZNF786Q8N393 782 aa13.21□□□□□ -0.29
TPM1-207ENST00000403994 PAQR4Q8N4S7 273 aaPredicted RBP13.21□□□□□ -0.29
TPM1-207ENST00000403994 SOX7Q9BT81 388 aa13.21□□□□□ -0.29
TPM1-207ENST00000403994 CHODLQ9H9P2 273 aa13.21□□□□□ -0.29
TPM1-207ENST00000403994 MAN2C1Q9NTJ4 1040 aa13.21□□□□□ -0.29
TPM1-207ENST00000403994 LPAR3Q9UBY5 353 aa13.21□□□□□ -0.29
TPM1-207ENST00000403994 KCNS2Q9ULS6 477 aa13.21□□□□□ -0.29
TPM1-207ENST00000403994 A4GNTQ9UNA3 340 aa13.21□□□□□ -0.29
TPM1-207ENST00000403994 HIF3AQ9Y2N7 669 aa13.21□□□□□ -0.29
TPM1-207ENST00000403994 LRP5LA4QPB2 252 aa13.2□□□□□ -0.3
TPM1-207ENST00000403994 NME4O00746 187 aa13.2□□□□□ -0.3
TPM1-207ENST00000403994 LMX1BO60663 402 aa13.2□□□□□ -0.3
TPM1-207ENST00000403994 ACADSP16219 412 aa13.2□□□□□ -0.3
TPM1-207ENST00000403994 ZNF84P51523 738 aa13.2□□□□□ -0.3
TPM1-207ENST00000403994 SLC7A2P52569 658 aa13.2□□□□□ -0.3
TPM1-207ENST00000403994 SELENOWP63302 87 aa13.2□□□□□ -0.3
TPM1-207ENST00000403994 FMODQ06828 376 aa13.2□□□□□ -0.3
TPM1-207ENST00000403994 ST3GAL3Q11203 375 aa13.2□□□□□ -0.3
TPM1-207ENST00000403994 TOP3AQ13472 1001 aaPredicted RBP13.2□□□□□ -0.3
TPM1-207ENST00000403994 RIN1Q13671 783 aa13.2□□□□□ -0.3
TPM1-207ENST00000403994 SLC36A2Q495M3 483 aa13.2□□□□□ -0.3
TPM1-207ENST00000403994 HSP90B2PQ58FF3 399 aa13.2□□□□□ -0.3
TPM1-207ENST00000403994 SLC16A14Q7RTX9 510 aa13.2□□□□□ -0.3
TPM1-207ENST00000403994 ARIH2OSQ8N7S6 290 aa13.2□□□□□ -0.3
TPM1-207ENST00000403994 RP9Q8TA86 221 aaKnown RBP13.2□□□□□ -0.3
TPM1-207ENST00000403994 UBASH3BQ8TF42 649 aa13.2□□□□□ -0.3
TPM1-207ENST00000403994 LZICQ8WZA0 190 aa13.2□□□□□ -0.3
TPM1-207ENST00000403994 NMD3Q96D46 503 aaKnown RBP13.2□□□□□ -0.3
TPM1-207ENST00000403994 BEX2Q9BXY8 128 aa13.2□□□□□ -0.3
TPM1-207ENST00000403994 SHARPINQ9H0F6 387 aa13.2□□□□□ -0.3
TPM1-207ENST00000403994 C1orf198Q9H425 327 aa13.2□□□□□ -0.3
TPM1-207ENST00000403994 STX18Q9P2W9 335 aaKnown RBP13.2□□□□□ -0.3
TPM1-207ENST00000403994 REV1Q9UBZ9 1251 aa13.2□□□□□ -0.3
TPM1-207ENST00000403994 UGT2A1Q9Y4X1 527 aa13.2□□□□□ -0.3
TPM1-207ENST00000403994 SNX13Q9Y5W8 968 aa13.2□□□□□ -0.3
TPM1-207ENST00000403994 A0A1W2PPW3 197 aa13.19□□□□□ -0.3
TPM1-207ENST00000403994 LYNX1G3V0Z9 82 aa13.19□□□□□ -0.3
TPM1-207ENST00000403994 LILRA1O75019 489 aa13.19□□□□□ -0.3
TPM1-207ENST00000403994 NCR1O76036 304 aa13.19□□□□□ -0.3
TPM1-207ENST00000403994 SNAP29O95721 258 aa13.19□□□□□ -0.3
TPM1-207ENST00000403994 IGHMP01871 453 aa13.19□□□□□ -0.3
TPM1-207ENST00000403994 IFNW1P05000 195 aa13.19□□□□□ -0.3
TPM1-207ENST00000403994 MMP7P09237 267 aaPredicted RBP13.19□□□□□ -0.3
TPM1-207ENST00000403994 TACSTD2P09758 323 aa13.19□□□□□ -0.3
TPM1-207ENST00000403994 FAM157BP0CG42 384 aa13.19□□□□□ -0.3
TPM1-207ENST00000403994 LYNX1P0DP58 116 aa13.19□□□□□ -0.3
TPM1-207ENST00000403994 COX4I1P13073 169 aa13.19□□□□□ -0.3
TPM1-207ENST00000403994 IFI30P13284 250 aa13.19□□□□□ -0.3
TPM1-207ENST00000403994 CCL2P13500 99 aa13.19□□□□□ -0.3
TPM1-207ENST00000403994 IL2RGP31785 369 aa13.19□□□□□ -0.3
TPM1-207ENST00000403994 CHN2P52757 468 aa13.19□□□□□ -0.3
TPM1-207ENST00000403994 MRPS34P82930 218 aaKnown RBP13.19□□□□□ -0.3
TPM1-207ENST00000403994 LIPEQ05469 1076 aa13.19□□□□□ -0.3
TPM1-207ENST00000403994 ALG10Q5BKT4 473 aa13.19□□□□□ -0.3
TPM1-207ENST00000403994 IL17RELQ6ZVW7 336 aa13.19□□□□□ -0.3
TPM1-207ENST00000403994 SLC15A3Q8IY34 581 aa13.19□□□□□ -0.3
TPM1-207ENST00000403994 RBM15BQ8NDT2 890 aaKnown RBP13.19□□□□□ -0.3
TPM1-207ENST00000403994 GEMIN6Q8WXD5 167 aaKnown RBP13.19□□□□□ -0.3
TPM1-207ENST00000403994 HDAC2Q92769 488 aaKnown RBP13.19□□□□□ -0.3
TPM1-207ENST00000403994 NABP1Q96AH0 204 aa13.19□□□□□ -0.3
TPM1-207ENST00000403994 BPIFA2Q96DR5 249 aa13.19□□□□□ -0.3
TPM1-207ENST00000403994 SNX18Q96RF0 628 aa13.19□□□□□ -0.3
TPM1-207ENST00000403994 TXNIPQ9H3M7 391 aa13.19□□□□□ -0.3
TPM1-207ENST00000403994 RNF121Q9H920 327 aa13.19□□□□□ -0.3
TPM1-207ENST00000403994 SMURF2Q9HAU4 748 aa13.19□□□□□ -0.3
TPM1-207ENST00000403994 CDH20Q9HBT6 801 aa13.19□□□□□ -0.3
TPM1-207ENST00000403994 MED4Q9NPJ6 270 aa13.19□□□□□ -0.3
TPM1-207ENST00000403994 RHCGQ9UBD6 479 aa13.19□□□□□ -0.3
TPM1-207ENST00000403994 AP3M1Q9Y2T2 418 aa13.19□□□□□ -0.3
TPM1-207ENST00000403994 IGKV1D-43A0A0B4J1Z2 117 aa13.18□□□□□ -0.3
TPM1-207ENST00000403994 J3KTA2 159 aa13.18□□□□□ -0.3
TPM1-207ENST00000403994 CXCR6O00574 342 aa13.18□□□□□ -0.3
TPM1-207ENST00000403994 FFAR1O14842 300 aa13.18□□□□□ -0.3
TPM1-207ENST00000403994 ZNF682O95780 498 aa13.18□□□□□ -0.3
TPM1-207ENST00000403994 NR2C1P13056 603 aa13.18□□□□□ -0.3
TPM1-207ENST00000403994 TCN1P20061 433 aaPredicted RBP13.18□□□□□ -0.3
TPM1-207ENST00000403994 MAKP20794 623 aa13.18□□□□□ -0.3
TPM1-207ENST00000403994 CDAP32320 146 aa13.18□□□□□ -0.3
TPM1-207ENST00000403994 MDH1P40925 334 aaKnown RBP13.18□□□□□ -0.3
TPM1-207ENST00000403994 YAP1P46937 504 aaKnown RBP13.18□□□□□ -0.3
TPM1-207ENST00000403994 SEC24CP53992 1094 aa13.18□□□□□ -0.3
TPM1-207ENST00000403994 ERVS71-1P61550 626 aa13.18□□□□□ -0.3
TPM1-207ENST00000403994 CD47Q08722 323 aa13.18□□□□□ -0.3
TPM1-207ENST00000403994 TRIP10Q15642 601 aa13.18□□□□□ -0.3
TPM1-207ENST00000403994 TBC1D28Q2M2D7 210 aa13.18□□□□□ -0.3
TPM1-207ENST00000403994 ELFN2Q5R3F8 820 aa13.18□□□□□ -0.3
TPM1-207ENST00000403994 FAM120AOSQ5T036 256 aa13.18□□□□□ -0.3
TPM1-207ENST00000403994 RGS7BPQ6MZT1 257 aaPredicted RBP13.18□□□□□ -0.3
TPM1-207ENST00000403994 C8orf82Q6P1X6 216 aaPredicted RBP13.18□□□□□ -0.3
TPM1-207ENST00000403994 MEX3DQ86XN8 651 aaKnown RBP13.18□□□□□ -0.3
TPM1-207ENST00000403994 TREML1Q86YW5 311 aa13.18□□□□□ -0.3
TPM1-207ENST00000403994 NRMQ8IXM6 262 aa13.18□□□□□ -0.3
TPM1-207ENST00000403994 LRRC18Q8N456 261 aa13.18□□□□□ -0.3
TPM1-207ENST00000403994 SPATA3Q8NHX4 192 aa13.18□□□□□ -0.3
TPM1-207ENST00000403994 HSH2DQ96JZ2 352 aa13.18□□□□□ -0.3
TPM1-207ENST00000403994 OR51B6Q9H340 312 aa13.18□□□□□ -0.3
TPM1-207ENST00000403994 MS4A5Q9H3V2 200 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms