RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 SLC35D3Q5M8T2 416 aa11.7□□□□□ -0.54
USP11-204ENST00000377107 GLYATL3Q5SZD4 288 aa11.7□□□□□ -0.54
USP11-204ENST00000377107 CD163Q86VB7 1156 aa11.7□□□□□ -0.54
USP11-204ENST00000377107 SDR16C5Q8N3Y7 309 aa11.7□□□□□ -0.54
USP11-204ENST00000377107 ZNF417Q8TAU3 575 aa11.7□□□□□ -0.54
USP11-204ENST00000377107 CCDC74AQ96AQ1 378 aa11.7□□□□□ -0.54
USP11-204ENST00000377107 ZNF587Q96SQ5 575 aaPredicted RBP11.7□□□□□ -0.54
USP11-204ENST00000377107 CKLFQ9UBR5 152 aa11.7□□□□□ -0.54
USP11-204ENST00000377107 TICRRQ7Z2Z1 1910 aa11.7□□□□□ -0.54
USP11-204ENST00000377107 TSPAN4O14817 238 aa11.7□□□□□ -0.54
USP11-204ENST00000377107 AHSA1O95433 338 aa11.7□□□□□ -0.54
USP11-204ENST00000377107 MPC2O95563 127 aa11.7□□□□□ -0.54
USP11-204ENST00000377107 CD3DP04234 171 aa11.7□□□□□ -0.54
USP11-204ENST00000377107 SLC37A1P57057 533 aa11.7□□□□□ -0.54
USP11-204ENST00000377107 FUT7Q11130 342 aa11.7□□□□□ -0.54
USP11-204ENST00000377107 OR7A5Q15622 319 aa11.7□□□□□ -0.54
USP11-204ENST00000377107 BEX5Q5H9J7 111 aa11.7□□□□□ -0.54
USP11-204ENST00000377107 CARD17Q5XLA6 110 aa11.7□□□□□ -0.54
USP11-204ENST00000377107 TMEM205Q6UW68 189 aa11.7□□□□□ -0.54
USP11-204ENST00000377107 GPAT4Q86UL3 456 aa11.7□□□□□ -0.54
USP11-204ENST00000377107 ZNF440Q8IYI8 595 aa11.7□□□□□ -0.54
USP11-204ENST00000377107 ACBD4Q8NC06 268 aa11.7□□□□□ -0.54
USP11-204ENST00000377107 SFXN2Q96NB2 322 aa11.7□□□□□ -0.54
USP11-204ENST00000377107 MED29Q9NX70 200 aa11.7□□□□□ -0.54
USP11-204ENST00000377107 ELF5Q9UKW6 265 aaPredicted RBP11.7□□□□□ -0.54
USP11-204ENST00000377107 MAB21L2Q9Y586 359 aa11.7□□□□□ -0.54
USP11-204ENST00000377107 CPED1A4D0V7 1026 aa11.69□□□□□ -0.54
USP11-204ENST00000377107 NPIPB9F8W1W9 429 aa11.69□□□□□ -0.54
USP11-204ENST00000377107 CD2P06729 351 aa11.69□□□□□ -0.54
USP11-204ENST00000377107 ZNF35P13682 527 aa11.69□□□□□ -0.54
USP11-204ENST00000377107 HLA-DOBP13765 273 aa11.69□□□□□ -0.54
USP11-204ENST00000377107 FBLP22087 321 aaKnown RBP11.69□□□□□ -0.54
USP11-204ENST00000377107 FAUP35544 74 aaKnown RBP11.69□□□□□ -0.54
USP11-204ENST00000377107 CAPZA2P47755 286 aa11.69□□□□□ -0.54
USP11-204ENST00000377107 OPCMLQ14982 345 aa11.69□□□□□ -0.54
USP11-204ENST00000377107 C17orf107Q6ZR85 190 aa11.69□□□□□ -0.54
USP11-204ENST00000377107 MAMDC2Q7Z304 686 aaPredicted RBP11.69□□□□□ -0.54
USP11-204ENST00000377107 TEX19Q8NA77 164 aa11.69□□□□□ -0.54
USP11-204ENST00000377107 OR4C16Q8NGL9 310 aa11.69□□□□□ -0.54
USP11-204ENST00000377107 SLC25A44Q96H78 314 aaPredicted RBP11.69□□□□□ -0.54
USP11-204ENST00000377107 SPACA5Q96QH8 159 aa11.69□□□□□ -0.54
USP11-204ENST00000377107 PDCD10Q9BUL8 212 aa11.69□□□□□ -0.54
USP11-204ENST00000377107 C8orf33Q9H7E9 229 aaPredicted RBP11.69□□□□□ -0.54
USP11-204ENST00000377107 MEIKINA0A087WXM9 373 aa11.69□□□□□ -0.54
USP11-204ENST00000377107 ZNF749O43361 778 aa11.69□□□□□ -0.54
USP11-204ENST00000377107 UPK3AO75631 287 aa11.69□□□□□ -0.54
USP11-204ENST00000377107 SPDEFO95238 335 aa11.69□□□□□ -0.54
USP11-204ENST00000377107 CTLA4P16410 223 aa11.69□□□□□ -0.54
USP11-204ENST00000377107 POU3F2P20265 443 aaPredicted RBP11.69□□□□□ -0.54
USP11-204ENST00000377107 IL11P20809 199 aa11.69□□□□□ -0.54
USP11-204ENST00000377107 PRSS3P35030 304 aa11.69□□□□□ -0.54
USP11-204ENST00000377107 PPICP45877 212 aa11.69□□□□□ -0.54
USP11-204ENST00000377107 CAMK2BQ13554 666 aa11.69□□□□□ -0.54
USP11-204ENST00000377107 RAB11BQ15907 218 aa11.69□□□□□ -0.54
USP11-204ENST00000377107 C2orf76Q3KRA6 126 aa11.69□□□□□ -0.54
USP11-204ENST00000377107 FAM69AQ5T7M9 428 aa11.69□□□□□ -0.54
USP11-204ENST00000377107 BAIAP2L2Q6UXY1 529 aa11.69□□□□□ -0.54
USP11-204ENST00000377107 LINC00114Q6XXX2 140 aa11.69□□□□□ -0.54
USP11-204ENST00000377107 ZDHHC12Q96GR4 267 aa11.69□□□□□ -0.54
USP11-204ENST00000377107 TTYH1Q9H313 450 aaPredicted RBP11.69□□□□□ -0.54
USP11-204ENST00000377107 NARFLQ9H6Q4 476 aa11.69□□□□□ -0.54
USP11-204ENST00000377107 ANKRD10Q9NXR5 420 aa11.69□□□□□ -0.54
USP11-204ENST00000377107 TAS2R4Q9NYW5 299 aa11.69□□□□□ -0.54
USP11-204ENST00000377107 CTSFQ9UBX1 484 aa11.69□□□□□ -0.54
USP11-204ENST00000377107 HIF3AQ9Y2N7 669 aa11.69□□□□□ -0.54
USP11-204ENST00000377107 PCDH15Q96QU1 1955 aa11.69□□□□□ -0.54
USP11-204ENST00000377107 MUC22E2RYF6 1773 aaPredicted RBP11.69□□□□□ -0.54
USP11-204ENST00000377107 TMED7-TICAM2A0A0A6YYA0 188 aa11.69□□□□□ -0.54
USP11-204ENST00000377107 ZNF28P17035 718 aa11.69□□□□□ -0.54
USP11-204ENST00000377107 DYRK1AQ13627 763 aa11.69□□□□□ -0.54
USP11-204ENST00000377107 FAM69BQ5VUD6 431 aa11.69□□□□□ -0.54
USP11-204ENST00000377107 FAM198BQ6UWH4 519 aa11.69□□□□□ -0.54
USP11-204ENST00000377107 FAM3DQ96BQ1 224 aa11.69□□□□□ -0.54
USP11-204ENST00000377107 HAVCR1Q96D42 359 aa11.69□□□□□ -0.54
USP11-204ENST00000377107 PTDSS2Q9BVG9 487 aa11.69□□□□□ -0.54
USP11-204ENST00000377107 PRDM9Q9NQV7 894 aa11.69□□□□□ -0.54
USP11-204ENST00000377107 FBXL2Q9UKC9 423 aa11.69□□□□□ -0.54
USP11-204ENST00000377107 TMED7Q9Y3B3 224 aa11.69□□□□□ -0.54
USP11-204ENST00000377107 PNPP00491 289 aa11.68□□□□□ -0.54
USP11-204ENST00000377107 PDGFAP04085 211 aa11.68□□□□□ -0.54
USP11-204ENST00000377107 TPOP07202 933 aa11.68□□□□□ -0.54
USP11-204ENST00000377107 SULT1A3P0DMM9 295 aa11.68□□□□□ -0.54
USP11-204ENST00000377107 SULT1A4P0DMN0 295 aa11.68□□□□□ -0.54
USP11-204ENST00000377107 ALOX5APP20292 161 aa11.68□□□□□ -0.54
USP11-204ENST00000377107 CMIPQ8IY22 773 aa11.68□□□□□ -0.54
USP11-204ENST00000377107 PRSS35Q8N3Z0 413 aa11.68□□□□□ -0.54
USP11-204ENST00000377107 OR51A2Q8NGJ7 313 aa11.68□□□□□ -0.54
USP11-204ENST00000377107 OR13C3Q8NGS6 347 aa11.68□□□□□ -0.54
USP11-204ENST00000377107 PMM1Q92871 262 aa11.68□□□□□ -0.54
USP11-204ENST00000377107 MIB2Q96AX9 1013 aa11.68□□□□□ -0.54
USP11-204ENST00000377107 CHST6Q9GZX3 395 aa11.68□□□□□ -0.54
USP11-204ENST00000377107 GMEB2Q9UKD1 530 aa11.68□□□□□ -0.54
USP11-204ENST00000377107 TMEM14AQ9Y6G1 99 aa11.68□□□□□ -0.54
USP11-204ENST00000377107 OR4C45A6NMZ5 311 aa11.68□□□□□ -0.54
USP11-204ENST00000377107 TPD52L2O43399 206 aaKnown RBP11.68□□□□□ -0.54
USP11-204ENST00000377107 AMY2AP04746 511 aa11.68□□□□□ -0.54
USP11-204ENST00000377107 ITGA5P08648 1049 aa11.68□□□□□ -0.54
USP11-204ENST00000377107 GAAP10253 952 aa11.68□□□□□ -0.54
USP11-204ENST00000377107 SLC2A1P11166 492 aa11.68□□□□□ -0.54
USP11-204ENST00000377107 PGCP20142 388 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms