RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 MEOX1P50221 254 aa9.91□□□□□ -0.82
PDPN-202ENST00000376057 LHX2P50458 406 aa9.91□□□□□ -0.82
PDPN-202ENST00000376057 FABP5Q01469 135 aa9.91□□□□□ -0.82
PDPN-202ENST00000376057 MELKQ14680 651 aa9.91□□□□□ -0.82
PDPN-202ENST00000376057 CDK5R1Q15078 307 aa9.91□□□□□ -0.82
PDPN-202ENST00000376057 ATP1A1-AS1Q5TC04 95 aa9.91□□□□□ -0.82
PDPN-202ENST00000376057 HBMQ6B0K9 141 aa9.91□□□□□ -0.82
PDPN-202ENST00000376057 YRDCQ86U90 279 aaKnown RBP9.91□□□□□ -0.82
PDPN-202ENST00000376057 OR9K2Q8NGE7 335 aa9.91□□□□□ -0.82
PDPN-202ENST00000376057 OR51L1Q8NGJ5 315 aa9.91□□□□□ -0.82
PDPN-202ENST00000376057 TMEM45BQ96B21 275 aa9.91□□□□□ -0.82
PDPN-202ENST00000376057 ZDHHC11Q9H8X9 412 aa9.91□□□□□ -0.82
PDPN-202ENST00000376057 PLA2G3Q9NZ20 509 aa9.91□□□□□ -0.82
PDPN-202ENST00000376057 PMF1-BGLAPU3KQ54 211 aa9.91□□□□□ -0.82
PDPN-202ENST00000376057 ANKRD61A6NGH8 418 aa9.9□□□□□ -0.82
PDPN-202ENST00000376057 H7C1C5 153 aa9.9□□□□□ -0.82
PDPN-202ENST00000376057 J3QLW9 94 aa9.9□□□□□ -0.82
PDPN-202ENST00000376057 SMAD9O15198 467 aaKnown RBP9.9□□□□□ -0.82
PDPN-202ENST00000376057 CYTIPO60759 359 aa9.9□□□□□ -0.82
PDPN-202ENST00000376057 ZNF432O94892 652 aa9.9□□□□□ -0.82
PDPN-202ENST00000376057 ZNF19P17023 458 aa9.9□□□□□ -0.82
PDPN-202ENST00000376057 CELP19835 753 aa9.9□□□□□ -0.82
PDPN-202ENST00000376057 POU3F2P20265 443 aaPredicted RBP9.9□□□□□ -0.82
PDPN-202ENST00000376057 NR4A1P22736 598 aa9.9□□□□□ -0.82
PDPN-202ENST00000376057 SOX6P35712 828 aa9.9□□□□□ -0.82
PDPN-202ENST00000376057 NAA10P41227 235 aaPredicted RBP9.9□□□□□ -0.82
PDPN-202ENST00000376057 LCN6P62502 163 aa9.9□□□□□ -0.82
PDPN-202ENST00000376057 ZNF766Q5HY98 468 aa9.9□□□□□ -0.82
PDPN-202ENST00000376057 SLC18B1Q6NT16 456 aa9.9□□□□□ -0.82
PDPN-202ENST00000376057 UNQ9370/PRO34162Q6UXP9 181 aa9.9□□□□□ -0.82
PDPN-202ENST00000376057 TMEM123Q8N131 208 aa9.9□□□□□ -0.82
PDPN-202ENST00000376057 TMEM251Q8N6I4 163 aa9.9□□□□□ -0.82
PDPN-202ENST00000376057 S100ZQ8WXG8 99 aa9.9□□□□□ -0.82
PDPN-202ENST00000376057 PNPLA2Q96AD5 504 aa9.9□□□□□ -0.82
PDPN-202ENST00000376057 TTYH2Q9BSA4 534 aa9.9□□□□□ -0.82
PDPN-202ENST00000376057 TMEM185BQ9H7F4 350 aa9.9□□□□□ -0.82
PDPN-202ENST00000376057 LAMP5Q9UJQ1 280 aa9.9□□□□□ -0.82
PDPN-202ENST00000376057 KCNMB2Q9Y691 235 aa9.9□□□□□ -0.82
PDPN-202ENST00000376057 SIRT4Q9Y6E7 314 aaPredicted RBP9.9□□□□□ -0.82
PDPN-202ENST00000376057 LOC100506127A0A0U1RQW1 187 aa9.9□□□□□ -0.82
PDPN-202ENST00000376057 SLC35F4A4IF30 521 aa9.9□□□□□ -0.82
PDPN-202ENST00000376057 TNFSF11O14788 317 aa9.9□□□□□ -0.82
PDPN-202ENST00000376057 GFRA3O60609 400 aa9.9□□□□□ -0.82
PDPN-202ENST00000376057 UPK3AO75631 287 aa9.9□□□□□ -0.82
PDPN-202ENST00000376057 GATBO75879 557 aaKnown RBP9.9□□□□□ -0.82
PDPN-202ENST00000376057 LAP3P28838 519 aa9.9□□□□□ -0.82
PDPN-202ENST00000376057 CCR9P51686 369 aa9.9□□□□□ -0.82
PDPN-202ENST00000376057 CLDN18P56856 261 aa9.9□□□□□ -0.82
PDPN-202ENST00000376057 ZNF404Q494X3 552 aa9.9□□□□□ -0.82
PDPN-202ENST00000376057 WIPI1Q5MNZ9 446 aaPredicted RBP9.9□□□□□ -0.82
PDPN-202ENST00000376057 WDFY1Q8IWB7 410 aa9.9□□□□□ -0.82
PDPN-202ENST00000376057 KDM8Q8N371 416 aa9.9□□□□□ -0.82
PDPN-202ENST00000376057 OR6Q1Q8NGQ2 317 aa9.9□□□□□ -0.82
PDPN-202ENST00000376057 TRMT61AQ96FX7 289 aaKnown RBP9.9□□□□□ -0.82
PDPN-202ENST00000376057 OR8B4Q96RC9 309 aa9.9□□□□□ -0.82
PDPN-202ENST00000376057 TBX5Q99593 518 aa9.9□□□□□ -0.82
PDPN-202ENST00000376057 SRXN1Q9BYN0 137 aa9.9□□□□□ -0.82
PDPN-202ENST00000376057 MED29Q9NX70 200 aa9.9□□□□□ -0.82
PDPN-202ENST00000376057 MRM2Q9UI43 246 aaKnown RBP9.9□□□□□ -0.82
PDPN-202ENST00000376057 FOXD3Q9UJU5 478 aaPredicted RBP9.9□□□□□ -0.82
PDPN-202ENST00000376057 PCDHGA9Q9Y5G4 932 aaKnown RBP9.9□□□□□ -0.82
PDPN-202ENST00000376057 ZNF726A6NNF4 738 aa9.89□□□□□ -0.83
PDPN-202ENST00000376057 ZNF716A6NP11 495 aa9.89□□□□□ -0.83
PDPN-202ENST00000376057 ACOT7O00154 380 aa9.89□□□□□ -0.83
PDPN-202ENST00000376057 ZNF593O00488 134 aaPredicted RBP9.89□□□□□ -0.83
PDPN-202ENST00000376057 CPN1P15169 458 aa9.89□□□□□ -0.83
PDPN-202ENST00000376057 CFL1P23528 166 aaKnown RBP9.89□□□□□ -0.83
PDPN-202ENST00000376057 MTNR1BP49286 362 aa9.89□□□□□ -0.83
PDPN-202ENST00000376057 CLDN15P56746 228 aa9.89□□□□□ -0.83
PDPN-202ENST00000376057 CLRN1P58418 232 aa9.89□□□□□ -0.83
PDPN-202ENST00000376057 LSM3P62310 102 aaKnown RBP9.89□□□□□ -0.83
PDPN-202ENST00000376057 ARG2P78540 354 aa9.89□□□□□ -0.83
PDPN-202ENST00000376057 KCTD18Q6PI47 426 aaPredicted RBP9.89□□□□□ -0.83
PDPN-202ENST00000376057 TMEM91Q6ZNR0 172 aa9.89□□□□□ -0.83
PDPN-202ENST00000376057 FAM220AQ7Z4H9 259 aa9.89□□□□□ -0.83
PDPN-202ENST00000376057 TPRA1Q86W33 373 aa9.89□□□□□ -0.83
PDPN-202ENST00000376057 ZNF679Q8IYX0 411 aa9.89□□□□□ -0.83
PDPN-202ENST00000376057 RFLNBQ8N5W9 214 aa9.89□□□□□ -0.83
PDPN-202ENST00000376057 ZIC4Q8N9L1 334 aa9.89□□□□□ -0.83
PDPN-202ENST00000376057 THRSPQ92748 146 aa9.89□□□□□ -0.83
PDPN-202ENST00000376057 SLC25A46Q96AG3 418 aa9.89□□□□□ -0.83
PDPN-202ENST00000376057 OR2M2Q96R28 347 aa9.89□□□□□ -0.83
PDPN-202ENST00000376057 CDADC1Q9BWV3 514 aa9.89□□□□□ -0.83
PDPN-202ENST00000376057 PALMDQ9NP74 551 aa9.89□□□□□ -0.83
PDPN-202ENST00000376057 COA3Q9Y2R0 106 aaPredicted RBP9.89□□□□□ -0.83
PDPN-202ENST00000376057 IQCMA0A1B0GVH7 501 aa9.89□□□□□ -0.83
PDPN-202ENST00000376057 E9PI62 339 aa9.89□□□□□ -0.83
PDPN-202ENST00000376057 GABRPO00591 440 aa9.89□□□□□ -0.83
PDPN-202ENST00000376057 TMCC2O75069 709 aa9.89□□□□□ -0.83
PDPN-202ENST00000376057 SERPINI2O75830 405 aa9.89□□□□□ -0.83
PDPN-202ENST00000376057 TRAPPC6AO75865 159 aa9.89□□□□□ -0.83
PDPN-202ENST00000376057 IGHG3P01860 377 aa9.89□□□□□ -0.83
PDPN-202ENST00000376057 KRT8P05787 483 aa9.89□□□□□ -0.83
PDPN-202ENST00000376057 ETV6P41212 452 aa9.89□□□□□ -0.83
PDPN-202ENST00000376057 RORCP51449 518 aa9.89□□□□□ -0.83
PDPN-202ENST00000376057 HCCSP53701 268 aa9.89□□□□□ -0.83
PDPN-202ENST00000376057 CLDN20P56880 219 aa9.89□□□□□ -0.83
PDPN-202ENST00000376057 LSM6P62312 80 aaKnown RBP9.89□□□□□ -0.83
PDPN-202ENST00000376057 C1QTNF12Q5T7M4 302 aa9.89□□□□□ -0.83
PDPN-202ENST00000376057 CROCCP3Q8IVE0 287 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms