RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 ZAR1LA6NP61 321 aa12.46□□□□□ -0.42
SMC6-201ENST00000351948 HOXB9P17482 250 aaPredicted RBP12.46□□□□□ -0.42
SMC6-201ENST00000351948 AGFG1P52594 562 aaKnown RBP12.46□□□□□ -0.42
SMC6-201ENST00000351948 NKX2-5P52952 324 aaPredicted RBP12.46□□□□□ -0.42
SMC6-201ENST00000351948 EXOSC6Q5RKV6 272 aaKnown RBP12.46□□□□□ -0.42
SMC6-201ENST00000351948 GJC3Q8NFK1 279 aa12.46□□□□□ -0.42
SMC6-201ENST00000351948 HAVCR2Q8TDQ0 301 aa12.46□□□□□ -0.42
SMC6-201ENST00000351948 B4GALT1P15291 398 aa12.45□□□□□ -0.42
SMC6-201ENST00000351948 CCDC58Q4VC31 144 aa12.45□□□□□ -0.42
SMC6-201ENST00000351948 ZNF684Q5T5D7 378 aa12.45□□□□□ -0.42
SMC6-201ENST00000351948 SLC46A3Q7Z3Q1 461 aa12.45□□□□□ -0.42
SMC6-201ENST00000351948 OR13C5Q8NGS8 318 aa12.45□□□□□ -0.42
SMC6-201ENST00000351948 CT55Q8WUE5 264 aa12.45□□□□□ -0.42
SMC6-201ENST00000351948 FKRPQ9H9S5 495 aa12.45□□□□□ -0.42
SMC6-201ENST00000351948 OTOFQ9HC10 1997 aa12.45□□□□□ -0.42
SMC6-201ENST00000351948 ARID1AO14497 2285 aa12.45□□□□□ -0.42
SMC6-201ENST00000351948 RGPD3A6NKT7 1758 aaPredicted RBP12.45□□□□□ -0.42
SMC6-201ENST00000351948 A0A1W2PQ09 198 aa12.45□□□□□ -0.42
SMC6-201ENST00000351948 CBR3O75828 277 aa12.45□□□□□ -0.42
SMC6-201ENST00000351948 NTN1O95631 604 aa12.45□□□□□ -0.42
SMC6-201ENST00000351948 YES1P07947 543 aa12.45□□□□□ -0.42
SMC6-201ENST00000351948 CDAP32320 146 aa12.45□□□□□ -0.42
SMC6-201ENST00000351948 UGT2B10P36537 528 aa12.45□□□□□ -0.42
SMC6-201ENST00000351948 SNRPGP62308 76 aaKnown RBP12.45□□□□□ -0.42
SMC6-201ENST00000351948 FGFBP1Q14512 234 aa12.45□□□□□ -0.42
SMC6-201ENST00000351948 SLC16A9Q7RTY1 509 aa12.45□□□□□ -0.42
SMC6-201ENST00000351948 ZNF454Q8N9F8 522 aa12.45□□□□□ -0.42
SMC6-201ENST00000351948 TMEM52Q8NDY8 209 aa12.45□□□□□ -0.42
SMC6-201ENST00000351948 OR51D1Q8NGF3 324 aa12.45□□□□□ -0.42
SMC6-201ENST00000351948 ZNF471Q9BX82 626 aaPredicted RBP12.45□□□□□ -0.42
SMC6-201ENST00000351948 IL2RAP01589 272 aa12.45□□□□□ -0.42
SMC6-201ENST00000351948 EPHA1P21709 976 aa12.45□□□□□ -0.42
SMC6-201ENST00000351948 GCNT2Q8N0V5 402 aa12.45□□□□□ -0.42
SMC6-201ENST00000351948 GDPD1Q8N9F7 314 aa12.45□□□□□ -0.42
SMC6-201ENST00000351948 OR13F1Q8NGS4 319 aa12.45□□□□□ -0.42
SMC6-201ENST00000351948 ORAI1Q96D31 301 aa12.45□□□□□ -0.42
SMC6-201ENST00000351948 C7orf34Q96L11 122 aa12.45□□□□□ -0.42
SMC6-201ENST00000351948 MICU1Q9BPX6 476 aa12.45□□□□□ -0.42
SMC6-201ENST00000351948 PCDHGA3Q9Y5H0 932 aa12.45□□□□□ -0.42
SMC6-201ENST00000351948 ARID2Q68CP9 1835 aa12.45□□□□□ -0.42
SMC6-201ENST00000351948 CREBL2O60519 120 aaPredicted RBP12.45□□□□□ -0.42
SMC6-201ENST00000351948 PAHP00439 452 aa12.45□□□□□ -0.42
SMC6-201ENST00000351948 C1QCP02747 245 aa12.45□□□□□ -0.42
SMC6-201ENST00000351948 GRPP07492 148 aa12.45□□□□□ -0.42
SMC6-201ENST00000351948 BDKRB2P30411 391 aa12.45□□□□□ -0.42
SMC6-201ENST00000351948 TGFBR1P36897 503 aa12.45□□□□□ -0.42
SMC6-201ENST00000351948 EIF3IQ13347 325 aaKnown RBP12.45□□□□□ -0.42
SMC6-201ENST00000351948 SPINK14Q6IE38 97 aa12.45□□□□□ -0.42
SMC6-201ENST00000351948 CRIPAKQ8N1N5 446 aa12.45□□□□□ -0.42
SMC6-201ENST00000351948 BEST4Q8NFU0 473 aa12.45□□□□□ -0.42
SMC6-201ENST00000351948 MRGPRX4Q96LA9 322 aa12.45□□□□□ -0.42
SMC6-201ENST00000351948 TTC28Q96AY4 2481 aa12.44□□□□□ -0.42
SMC6-201ENST00000351948 TRPM7Q96QT4 1865 aa12.44□□□□□ -0.42
SMC6-201ENST00000351948 H7C417 338 aa12.44□□□□□ -0.42
SMC6-201ENST00000351948 CXADRP78310 365 aa12.44□□□□□ -0.42
SMC6-201ENST00000351948 GLYATL3Q5SZD4 288 aa12.44□□□□□ -0.42
SMC6-201ENST00000351948 MEX3BQ6ZN04 569 aaKnown RBP12.44□□□□□ -0.42
SMC6-201ENST00000351948 C10orf111Q8N326 155 aa12.44□□□□□ -0.42
SMC6-201ENST00000351948 SLC25A45Q8N413 288 aa12.44□□□□□ -0.42
SMC6-201ENST00000351948 TTC9Q92623 222 aa12.44□□□□□ -0.42
SMC6-201ENST00000351948 SORCS2Q96PQ0 1159 aa12.44□□□□□ -0.42
SMC6-201ENST00000351948 SELENOIQ9C0D9 397 aa12.44□□□□□ -0.42
SMC6-201ENST00000351948 KCNG2Q9UJ96 466 aa12.44□□□□□ -0.42
SMC6-201ENST00000351948 A0A0A6YYH2 397 aa12.44□□□□□ -0.42
SMC6-201ENST00000351948 A6NJ64 397 aa12.44□□□□□ -0.42
SMC6-201ENST00000351948 ARPC1BO15143 372 aaKnown RBP12.44□□□□□ -0.42
SMC6-201ENST00000351948 IL1AP01583 271 aa12.44□□□□□ -0.42
SMC6-201ENST00000351948 CX3CR1P49238 355 aa12.44□□□□□ -0.42
SMC6-201ENST00000351948 PSPHP78330 225 aa12.44□□□□□ -0.42
SMC6-201ENST00000351948 IKZF1Q13422 519 aa12.44□□□□□ -0.42
SMC6-201ENST00000351948 LAIR1Q6GTX8 287 aa12.44□□□□□ -0.42
SMC6-201ENST00000351948 PGAP1Q75T13 922 aa12.44□□□□□ -0.42
SMC6-201ENST00000351948 PARP16Q8N5Y8 322 aa12.44□□□□□ -0.42
SMC6-201ENST00000351948 ZNF226Q9NYT6 803 aa12.44□□□□□ -0.42
SMC6-201ENST00000351948 PIGLQ9Y2B2 252 aa12.44□□□□□ -0.42
SMC6-201ENST00000351948 RAC2P15153 192 aa12.44□□□□□ -0.42
SMC6-201ENST00000351948 HOXD12P35452 270 aa12.44□□□□□ -0.42
SMC6-201ENST00000351948 SLC35A2P78381 396 aa12.44□□□□□ -0.42
SMC6-201ENST00000351948 ZMAT1Q5H9K5 638 aa12.44□□□□□ -0.42
SMC6-201ENST00000351948 OR51E1Q8TCB6 317 aa12.44□□□□□ -0.42
SMC6-201ENST00000351948 LIPHQ8WWY8 451 aa12.44□□□□□ -0.42
SMC6-201ENST00000351948 CCDC32Q9BV29 185 aa12.44□□□□□ -0.42
SMC6-201ENST00000351948 NRIP3Q9NQ35 241 aa12.44□□□□□ -0.42
SMC6-201ENST00000351948 ICE1Q9Y2F5 2266 aa12.44□□□□□ -0.42
SMC6-201ENST00000351948 GOLGB1Q14789 3259 aaKnown RBP12.44□□□□□ -0.42
SMC6-201ENST00000351948 NOTOA8MTQ0 251 aa12.44□□□□□ -0.42
SMC6-201ENST00000351948 MSR1P21757 451 aa12.44□□□□□ -0.42
SMC6-201ENST00000351948 ARSKQ6UWY0 536 aa12.44□□□□□ -0.42
SMC6-201ENST00000351948 BEST3Q8N1M1 668 aa12.44□□□□□ -0.42
SMC6-201ENST00000351948 ANKRD9Q96BM1 317 aaPredicted RBP12.44□□□□□ -0.42
SMC6-201ENST00000351948 SARAFQ96BY9 339 aa12.44□□□□□ -0.42
SMC6-201ENST00000351948 ABRACLQ9P1F3 81 aa12.44□□□□□ -0.42
SMC6-201ENST00000351948 RCE1Q9Y256 329 aa12.44□□□□□ -0.42
SMC6-201ENST00000351948 SCN5AQ14524 2016 aa12.44□□□□□ -0.42
SMC6-201ENST00000351948 SBF1O95248 1867 aa12.44□□□□□ -0.42
SMC6-201ENST00000351948 BOLA2-SMG1P6H3BVE0 249 aa12.43□□□□□ -0.42
SMC6-201ENST00000351948 FAM157BP0CG42 384 aa12.43□□□□□ -0.42
SMC6-201ENST00000351948 HTR2CP28335 458 aa12.43□□□□□ -0.42
SMC6-201ENST00000351948 SOX18P35713 384 aa12.43□□□□□ -0.42
SMC6-201ENST00000351948 SFXN4Q6P4A7 337 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms