RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 MRPL33O75394 65 aaKnown RBP13.4□□□□□ -0.26
CCDC140-201ENST00000295226 UPK3AO75631 287 aa13.4□□□□□ -0.26
CCDC140-201ENST00000295226 HMGN1P05114 100 aa13.4□□□□□ -0.26
CCDC140-201ENST00000295226 CLUP10909 449 aa13.4□□□□□ -0.26
CCDC140-201ENST00000295226 APEHP13798 732 aaKnown RBP13.4□□□□□ -0.26
CCDC140-201ENST00000295226 CEACAM8P31997 349 aaPredicted RBP13.4□□□□□ -0.26
CCDC140-201ENST00000295226 TIMP3P35625 211 aa13.4□□□□□ -0.26
CCDC140-201ENST00000295226 FMODQ06828 376 aa13.4□□□□□ -0.26
CCDC140-201ENST00000295226 CRMP1Q14194 572 aa13.4□□□□□ -0.26
CCDC140-201ENST00000295226 OR2A2Q6IF42 318 aa13.4□□□□□ -0.26
CCDC140-201ENST00000295226 FAM214BQ7L5A3 538 aa13.4□□□□□ -0.26
CCDC140-201ENST00000295226 BTLAQ7Z6A9 289 aa13.4□□□□□ -0.26
CCDC140-201ENST00000295226 JAZF1Q86VZ6 243 aa13.4□□□□□ -0.26
CCDC140-201ENST00000295226 TMEM123Q8N131 208 aa13.4□□□□□ -0.26
CCDC140-201ENST00000295226 TRUB1Q8WWH5 349 aaKnown RBP13.4□□□□□ -0.26
CCDC140-201ENST00000295226 SLC25A44Q96H78 314 aaPredicted RBP13.4□□□□□ -0.26
CCDC140-201ENST00000295226 FUNDC2Q9BWH2 189 aa13.4□□□□□ -0.26
CCDC140-201ENST00000295226 RERGLQ9H628 205 aa13.4□□□□□ -0.26
CCDC140-201ENST00000295226 CMC2Q9NRP2 79 aa13.4□□□□□ -0.26
CCDC140-201ENST00000295226 FKBP14Q9NWM8 211 aa13.4□□□□□ -0.26
CCDC140-201ENST00000295226 Q9UFV3 132 aa13.4□□□□□ -0.26
CCDC140-201ENST00000295226 PSORS1C1Q9UIG5 152 aa13.4□□□□□ -0.26
CCDC140-201ENST00000295226 DIDO1Q9BTC0 2240 aaKnown RBP13.4□□□□□ -0.26
CCDC140-201ENST00000295226 IGKV1D-43A0A0B4J1Z2 117 aa13.4□□□□□ -0.26
CCDC140-201ENST00000295226 NPIPB13A6NJU9 1138 aa13.4□□□□□ -0.26
CCDC140-201ENST00000295226 FAM171A2A8MVW0 826 aa13.4□□□□□ -0.26
CCDC140-201ENST00000295226 NPIPB4C9JG80 1138 aa13.4□□□□□ -0.26
CCDC140-201ENST00000295226 E9PLN8 166 aa13.4□□□□□ -0.26
CCDC140-201ENST00000295226 M0R3G1 203 aa13.4□□□□□ -0.26
CCDC140-201ENST00000295226 TNFSF13O75888 250 aa13.4□□□□□ -0.26
CCDC140-201ENST00000295226 PGA4P0DJD7 388 aa13.4□□□□□ -0.26
CCDC140-201ENST00000295226 PGA3P0DJD8 388 aa13.4□□□□□ -0.26
CCDC140-201ENST00000295226 PCYT1AP49585 367 aa13.4□□□□□ -0.26
CCDC140-201ENST00000295226 GP2P55259 537 aaKnown RBP13.4□□□□□ -0.26
CCDC140-201ENST00000295226 CLRN1P58418 232 aa13.4□□□□□ -0.26
CCDC140-201ENST00000295226 ITGADQ13349 1161 aa13.4□□□□□ -0.26
CCDC140-201ENST00000295226 TBCEQ15813 527 aaPredicted RBP13.4□□□□□ -0.26
CCDC140-201ENST00000295226 ETFDHQ16134 617 aa13.4□□□□□ -0.26
CCDC140-201ENST00000295226 UBE2UQ5VVX9 321 aa13.4□□□□□ -0.26
CCDC140-201ENST00000295226 BBS1Q8NFJ9 593 aa13.4□□□□□ -0.26
CCDC140-201ENST00000295226 OR9Q1Q8NGQ5 310 aa13.4□□□□□ -0.26
CCDC140-201ENST00000295226 SGCDQ92629 289 aa13.4□□□□□ -0.26
CCDC140-201ENST00000295226 PLEKHA8Q96JA3 519 aa13.4□□□□□ -0.26
CCDC140-201ENST00000295226 Q96MT0 163 aa13.4□□□□□ -0.26
CCDC140-201ENST00000295226 FOXN4Q96NZ1 517 aa13.4□□□□□ -0.26
CCDC140-201ENST00000295226 SLC38A2Q96QD8 506 aa13.4□□□□□ -0.26
CCDC140-201ENST00000295226 KCNK17Q96T54 332 aa13.4□□□□□ -0.26
CCDC140-201ENST00000295226 DDOQ99489 341 aa13.4□□□□□ -0.26
CCDC140-201ENST00000295226 VKORC1Q9BQB6 163 aa13.4□□□□□ -0.26
CCDC140-201ENST00000295226 COPS4Q9BT78 406 aa13.4□□□□□ -0.26
CCDC140-201ENST00000295226 MRPL13Q9BYD1 178 aaKnown RBP13.4□□□□□ -0.26
CCDC140-201ENST00000295226 SYT4Q9H2B2 425 aa13.4□□□□□ -0.26
CCDC140-201ENST00000295226 PLGRKTQ9HBL7 147 aa13.4□□□□□ -0.26
CCDC140-201ENST00000295226 SRA1Q9HD15 236 aaKnown RBP13.4□□□□□ -0.26
CCDC140-201ENST00000295226 ACOT13Q9NPJ3 140 aa13.4□□□□□ -0.26
CCDC140-201ENST00000295226 HINT3Q9NQE9 182 aaKnown RBP13.4□□□□□ -0.26
CCDC140-201ENST00000295226 GLRX2Q9NS18 164 aa13.4□□□□□ -0.26
CCDC140-201ENST00000295226 PRSS50Q9UI38 385 aa13.4□□□□□ -0.26
CCDC140-201ENST00000295226 HIVEP3Q5T1R4 2406 aa13.39□□□□□ -0.27
CCDC140-201ENST00000295226 A0A1W2PPW3 197 aa13.39□□□□□ -0.27
CCDC140-201ENST00000295226 SLC22A23A1A5C7 686 aa13.39□□□□□ -0.27
CCDC140-201ENST00000295226 PRSS37A4D1T9 235 aa13.39□□□□□ -0.27
CCDC140-201ENST00000295226 EFCAB10A6NFE3 127 aa13.39□□□□□ -0.27
CCDC140-201ENST00000295226 RIIAD1A6NNX1 92 aa13.39□□□□□ -0.27
CCDC140-201ENST00000295226 DCTN6O00399 190 aa13.39□□□□□ -0.27
CCDC140-201ENST00000295226 LRRTM2O43300 516 aa13.39□□□□□ -0.27
CCDC140-201ENST00000295226 INMTO95050 263 aa13.39□□□□□ -0.27
CCDC140-201ENST00000295226 GABARAPO95166 117 aa13.39□□□□□ -0.27
CCDC140-201ENST00000295226 IGHG1P01857 330 aa13.39□□□□□ -0.27
CCDC140-201ENST00000295226 MT-ND2P03891 347 aa13.39□□□□□ -0.27
CCDC140-201ENST00000295226 GYPBP06028 91 aa13.39□□□□□ -0.27
CCDC140-201ENST00000295226 GABRB1P18505 474 aa13.39□□□□□ -0.27
CCDC140-201ENST00000295226 EFNB1P98172 346 aa13.39□□□□□ -0.27
CCDC140-201ENST00000295226 PIGFQ07326 219 aa13.39□□□□□ -0.27
CCDC140-201ENST00000295226 TSPO2Q5TGU0 170 aa13.39□□□□□ -0.27
CCDC140-201ENST00000295226 PLBD1Q6P4A8 553 aa13.39□□□□□ -0.27
CCDC140-201ENST00000295226 LINGO2Q7L985 606 aa13.39□□□□□ -0.27
CCDC140-201ENST00000295226 LIX1LQ8IVB5 337 aa13.39□□□□□ -0.27
CCDC140-201ENST00000295226 CPOQ8IVL8 374 aa13.39□□□□□ -0.27
CCDC140-201ENST00000295226 ZNF100Q8IYN0 542 aa13.39□□□□□ -0.27
CCDC140-201ENST00000295226 OR51L1Q8NGJ5 315 aa13.39□□□□□ -0.27
CCDC140-201ENST00000295226 OR6N1Q8NGY5 312 aa13.39□□□□□ -0.27
CCDC140-201ENST00000295226 ZNRF4Q8WWF5 429 aa13.39□□□□□ -0.27
CCDC140-201ENST00000295226 PTP4A1Q93096 173 aa13.39□□□□□ -0.27
CCDC140-201ENST00000295226 TMEM45BQ96B21 275 aa13.39□□□□□ -0.27
CCDC140-201ENST00000295226 STARD4Q96DR4 205 aa13.39□□□□□ -0.27
CCDC140-201ENST00000295226 ZNF837Q96EG3 531 aaPredicted RBP13.39□□□□□ -0.27
CCDC140-201ENST00000295226 DCUN1D5Q9BTE7 237 aa13.39□□□□□ -0.27
CCDC140-201ENST00000295226 TEX12Q9BXU0 123 aa13.39□□□□□ -0.27
CCDC140-201ENST00000295226 RPRD1BQ9NQG5 326 aaKnown RBP13.39□□□□□ -0.27
CCDC140-201ENST00000295226 SLC7A10Q9NS82 523 aa13.39□□□□□ -0.27
CCDC140-201ENST00000295226 CLN6Q9NWW5 311 aa13.39□□□□□ -0.27
CCDC140-201ENST00000295226 CNOT2Q9NZN8 540 aaKnown RBP13.39□□□□□ -0.27
CCDC140-201ENST00000295226 EMC9Q9Y3B6 208 aa13.39□□□□□ -0.27
CCDC140-201ENST00000295226 A6NIZ1 184 aa13.38□□□□□ -0.27
CCDC140-201ENST00000295226 SLC43A1O75387 559 aa13.38□□□□□ -0.27
CCDC140-201ENST00000295226 GPANK1O95872 356 aa13.38□□□□□ -0.27
CCDC140-201ENST00000295226 IFNGP01579 166 aa13.38□□□□□ -0.27
CCDC140-201ENST00000295226 CDK1P06493 297 aa13.38□□□□□ -0.27
CCDC140-201ENST00000295226 ZNF3P17036 446 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms