RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 CCT7Q99832 543 aa3.68□□□□□ -1.82
TRA2B-201ENST00000259043 ST6GALNAC5Q9BVH7 336 aa3.68□□□□□ -1.82
TRA2B-201ENST00000259043 OCR1Q9BZK8 76 aa3.68□□□□□ -1.82
TRA2B-201ENST00000259043 LIME1Q9H400 295 aa3.68□□□□□ -1.82
TRA2B-201ENST00000259043 GORASP2Q9H8Y8 452 aa3.68□□□□□ -1.82
TRA2B-201ENST00000259043 LRRC40Q9H9A6 602 aa3.68□□□□□ -1.82
TRA2B-201ENST00000259043 ESM1Q9NQ30 184 aa3.68□□□□□ -1.82
TRA2B-201ENST00000259043 MRPL40Q9NQ50 206 aaKnown RBP3.68□□□□□ -1.82
TRA2B-201ENST00000259043 ZNF446Q9NWS9 450 aa3.68□□□□□ -1.82
TRA2B-201ENST00000259043 RAB20Q9NX57 234 aa3.68□□□□□ -1.82
TRA2B-201ENST00000259043 AIPL1Q9NZN9 384 aa3.68□□□□□ -1.82
TRA2B-201ENST00000259043 RCOR3Q9P2K3 495 aaPredicted RBP3.68□□□□□ -1.82
TRA2B-201ENST00000259043 GALPQ9UBC7 116 aa3.68□□□□□ -1.82
TRA2B-201ENST00000259043 RNF14Q9UBS8 474 aa3.68□□□□□ -1.82
TRA2B-201ENST00000259043 EXOSC1Q9Y3B2 195 aaKnown RBP3.68□□□□□ -1.82
TRA2B-201ENST00000259043 SNX10Q9Y5X0 201 aa3.68□□□□□ -1.82
TRA2B-201ENST00000259043 CSPG4Q6UVK1 2322 aa3.67□□□□□ -1.82
TRA2B-201ENST00000259043 IGHV1OR21-1A0A087WYE8 117 aa3.67□□□□□ -1.82
TRA2B-201ENST00000259043 TRBV7-9A0A0J9YWB2 115 aa3.67□□□□□ -1.82
TRA2B-201ENST00000259043 TMEM110-MUSTN1A8MSY1 372 aa3.67□□□□□ -1.82
TRA2B-201ENST00000259043 C11orf98E9PRG8 122 aa3.67□□□□□ -1.82
TRA2B-201ENST00000259043 K7EQG2 157 aa3.67□□□□□ -1.82
TRA2B-201ENST00000259043 CASKO14936 926 aa3.67□□□□□ -1.82
TRA2B-201ENST00000259043 GALR3O60755 368 aaPredicted RBP3.67□□□□□ -1.82
TRA2B-201ENST00000259043 BCAS1O75363 584 aaPredicted RBP3.67□□□□□ -1.82
TRA2B-201ENST00000259043 TM7SF2O76062 418 aa3.67□□□□□ -1.82
TRA2B-201ENST00000259043 TNFP01375 233 aa3.67□□□□□ -1.82
TRA2B-201ENST00000259043 H2AFZP0C0S5 128 aa3.67□□□□□ -1.82
TRA2B-201ENST00000259043 CDH4P55283 916 aa3.67□□□□□ -1.82
TRA2B-201ENST00000259043 YWHAEP62258 255 aaKnown RBP3.67□□□□□ -1.82
TRA2B-201ENST00000259043 ENPEPQ07075 957 aa3.67□□□□□ -1.82
TRA2B-201ENST00000259043 SELPLGQ14242 412 aa3.67□□□□□ -1.82
TRA2B-201ENST00000259043 RAB35Q15286 201 aa3.67□□□□□ -1.82
TRA2B-201ENST00000259043 LINC01620Q4KN68 170 aa3.67□□□□□ -1.82
TRA2B-201ENST00000259043 CARD16Q5EG05 197 aa3.67□□□□□ -1.82
TRA2B-201ENST00000259043 REP15Q6BDI9 236 aa3.67□□□□□ -1.82
TRA2B-201ENST00000259043 BTNL3Q6UXE8 466 aa3.67□□□□□ -1.82
TRA2B-201ENST00000259043 H2AFVQ71UI9 128 aa3.67□□□□□ -1.82
TRA2B-201ENST00000259043 ZNF584Q8IVC4 421 aa3.67□□□□□ -1.82
TRA2B-201ENST00000259043 SYCE1Q8N0S2 351 aa3.67□□□□□ -1.82
TRA2B-201ENST00000259043 RNF10Q8N5U6 811 aaKnown RBP3.67□□□□□ -1.82
TRA2B-201ENST00000259043 CEP112Q8N8E3 955 aa3.67□□□□□ -1.82
TRA2B-201ENST00000259043 ATP6V0D2Q8N8Y2 350 aa3.67□□□□□ -1.82
TRA2B-201ENST00000259043 DCAF4L2Q8NA75 395 aa3.67□□□□□ -1.82
TRA2B-201ENST00000259043 ZNRF1Q8ND25 227 aa3.67□□□□□ -1.82
TRA2B-201ENST00000259043 OR6K2Q8NGY2 324 aa3.67□□□□□ -1.82
TRA2B-201ENST00000259043 TRMT10AQ8TBZ6 339 aaKnown RBP3.67□□□□□ -1.82
TRA2B-201ENST00000259043 CTNNBL1Q8WYA6 563 aaPredicted RBP3.67□□□□□ -1.82
TRA2B-201ENST00000259043 ADIPOR1Q96A54 375 aa3.67□□□□□ -1.82
TRA2B-201ENST00000259043 CAPZA3Q96KX2 299 aa3.67□□□□□ -1.82
TRA2B-201ENST00000259043 HSFY1Q96LI6 401 aa3.67□□□□□ -1.82
TRA2B-201ENST00000259043 RPRD1AQ96P16 312 aaPredicted RBP3.67□□□□□ -1.82
TRA2B-201ENST00000259043 CCDC28BQ9BUN5 200 aa3.67□□□□□ -1.82
TRA2B-201ENST00000259043 TRIM62Q9BVG3 475 aa3.67□□□□□ -1.82
TRA2B-201ENST00000259043 COMMD4Q9H0A8 199 aa3.67□□□□□ -1.82
TRA2B-201ENST00000259043 CALHM2Q9HA72 323 aa3.67□□□□□ -1.82
TRA2B-201ENST00000259043 ASF1BQ9NVP2 202 aa3.67□□□□□ -1.82
TRA2B-201ENST00000259043 ZNF346Q9UL40 294 aaKnown RBP3.67□□□□□ -1.82
TRA2B-201ENST00000259043 VANGL2Q9ULK5 521 aa3.67□□□□□ -1.82
TRA2B-201ENST00000259043 HPCAL4Q9UM19 191 aa3.67□□□□□ -1.82
TRA2B-201ENST00000259043 SPATA2Q9UM82 520 aa3.67□□□□□ -1.82
TRA2B-201ENST00000259043 MRPS33Q9Y291 106 aaKnown RBP3.67□□□□□ -1.82
TRA2B-201ENST00000259043 NTNG1Q9Y2I2 539 aa3.67□□□□□ -1.82
TRA2B-201ENST00000259043 RNF115Q9Y4L5 304 aa3.67□□□□□ -1.82
TRA2B-201ENST00000259043 SAR1BQ9Y6B6 198 aa3.67□□□□□ -1.82
TRA2B-201ENST00000259043 V9GYY5 206 aaPredicted RBP3.67□□□□□ -1.82
TRA2B-201ENST00000259043 SPACA6W5XKT8 324 aa3.67□□□□□ -1.82
TRA2B-201ENST00000259043 FN1P02751 2386 aaKnown RBP3.67□□□□□ -1.82
TRA2B-201ENST00000259043 MYO7BQ6PIF6 2116 aa3.67□□□□□ -1.82
TRA2B-201ENST00000259043 PIKFYVEQ9Y2I7 2098 aa3.66□□□□□ -1.82
TRA2B-201ENST00000259043 RTTNQ86VV8 2226 aa3.66□□□□□ -1.82
TRA2B-201ENST00000259043 A0A087X0T9 212 aa3.66□□□□□ -1.82
TRA2B-201ENST00000259043 CTAGE15A4D2H0 777 aa3.66□□□□□ -1.82
TRA2B-201ENST00000259043 M0QYV0 167 aa3.66□□□□□ -1.82
TRA2B-201ENST00000259043 PHOX2AO14813 284 aa3.66□□□□□ -1.82
TRA2B-201ENST00000259043 MED7O43513 233 aa3.66□□□□□ -1.82
TRA2B-201ENST00000259043 TYROBPO43914 113 aa3.66□□□□□ -1.82
TRA2B-201ENST00000259043 GPRIN2O60269 458 aa3.66□□□□□ -1.82
TRA2B-201ENST00000259043 DPM1O60762 260 aa3.66□□□□□ -1.82
TRA2B-201ENST00000259043 CLDN11O75508 207 aa3.66□□□□□ -1.82
TRA2B-201ENST00000259043 LCA5LO95447 670 aa3.66□□□□□ -1.82
TRA2B-201ENST00000259043 IGKV3-15P01624 115 aa3.66□□□□□ -1.82
TRA2B-201ENST00000259043 MT-ND1P03886 318 aa3.66□□□□□ -1.82
TRA2B-201ENST00000259043 RHOCP08134 193 aa3.66□□□□□ -1.82
TRA2B-201ENST00000259043 MELTFP08582 738 aa3.66□□□□□ -1.82
TRA2B-201ENST00000259043 FAM228BP0C875 321 aa3.66□□□□□ -1.82
TRA2B-201ENST00000259043 PNMA6AP0CW24 399 aaPredicted RBP3.66□□□□□ -1.82
TRA2B-201ENST00000259043 ANXA3P12429 323 aa3.66□□□□□ -1.82
TRA2B-201ENST00000259043 BCKDHAP12694 445 aa3.66□□□□□ -1.82
TRA2B-201ENST00000259043 RPS2P15880 293 aaKnown RBP3.66□□□□□ -1.82
TRA2B-201ENST00000259043 AK4P27144 223 aaPredicted RBP3.66□□□□□ -1.82
TRA2B-201ENST00000259043 SSR1P43307 286 aaKnown RBP3.66□□□□□ -1.82
TRA2B-201ENST00000259043 RGS4P49798 205 aa3.66□□□□□ -1.82
TRA2B-201ENST00000259043 PPT1P50897 306 aa3.66□□□□□ -1.82
TRA2B-201ENST00000259043 MFAP2P55001 183 aa3.66□□□□□ -1.82
TRA2B-201ENST00000259043 LRRC74AQ0VAA2 488 aa3.66□□□□□ -1.82
TRA2B-201ENST00000259043 IL24Q13007 206 aa3.66□□□□□ -1.82
TRA2B-201ENST00000259043 CUL2Q13617 745 aa3.66□□□□□ -1.82
TRA2B-201ENST00000259043 MESDQ14696 234 aa3.66□□□□□ -1.82
TRA2B-201ENST00000259043 PDK3Q15120 406 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms