RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 RPL3LQ92901 407 aaKnown RBP9.32□□□□□ -0.92
LIG3-203ENST00000585370 MIB2Q96AX9 1013 aa9.32□□□□□ -0.92
LIG3-203ENST00000585370 C5orf34Q96MH7 638 aa9.32□□□□□ -0.92
LIG3-203ENST00000585370 OXGR1Q96P68 337 aa9.32□□□□□ -0.92
LIG3-203ENST00000585370 NAA11Q9BSU3 229 aaPredicted RBP9.32□□□□□ -0.92
LIG3-203ENST00000585370 MED18Q9BUE0 208 aa9.32□□□□□ -0.92
LIG3-203ENST00000585370 PLGRKTQ9HBL7 147 aa9.32□□□□□ -0.92
LIG3-203ENST00000585370 SRA1Q9HD15 236 aaKnown RBP9.32□□□□□ -0.92
LIG3-203ENST00000585370 EXOSC4Q9NPD3 245 aaKnown RBP9.32□□□□□ -0.92
LIG3-203ENST00000585370 LRFN1Q9P244 771 aa9.32□□□□□ -0.92
LIG3-203ENST00000585370 BOKQ9UMX3 212 aaPredicted RBP9.32□□□□□ -0.92
LIG3-203ENST00000585370 NPIPA1Q9UND3 350 aa9.32□□□□□ -0.92
LIG3-203ENST00000585370 RASD1Q9Y272 281 aa9.32□□□□□ -0.92
LIG3-203ENST00000585370 SF3B6Q9Y3B4 125 aaKnown RBP9.32□□□□□ -0.92
LIG3-203ENST00000585370 MED13Q9UHV7 2174 aa9.31□□□□□ -0.92
LIG3-203ENST00000585370 ARPC4-TTLL3A0A0A6YYG9 625 aa9.31□□□□□ -0.92
LIG3-203ENST00000585370 A0A1W2PQL4 384 aaPredicted RBP9.31□□□□□ -0.92
LIG3-203ENST00000585370 H3BML4 177 aa9.31□□□□□ -0.92
LIG3-203ENST00000585370 SULT2B1O00204 365 aa9.31□□□□□ -0.92
LIG3-203ENST00000585370 OGG1O15527 345 aa9.31□□□□□ -0.92
LIG3-203ENST00000585370 PLPP2O43688 288 aa9.31□□□□□ -0.92
LIG3-203ENST00000585370 SERPINA3P01011 423 aa9.31□□□□□ -0.92
LIG3-203ENST00000585370 IL1AP01583 271 aa9.31□□□□□ -0.92
LIG3-203ENST00000585370 GYPBP06028 91 aa9.31□□□□□ -0.92
LIG3-203ENST00000585370 NR2C1P13056 603 aa9.31□□□□□ -0.92
LIG3-203ENST00000585370 CELP19835 753 aa9.31□□□□□ -0.92
LIG3-203ENST00000585370 ITGA3P26006 1051 aa9.31□□□□□ -0.92
LIG3-203ENST00000585370 CD96P40200 585 aa9.31□□□□□ -0.92
LIG3-203ENST00000585370 OR2B6P58173 313 aa9.31□□□□□ -0.92
LIG3-203ENST00000585370 HSF1Q00613 529 aa9.31□□□□□ -0.92
LIG3-203ENST00000585370 OC90Q02509 493 aaPredicted RBP9.31□□□□□ -0.92
LIG3-203ENST00000585370 ZNF85Q03923 595 aa9.31□□□□□ -0.92
LIG3-203ENST00000585370 KLRB1Q12918 225 aa9.31□□□□□ -0.92
LIG3-203ENST00000585370 INPP5JQ15735 1006 aaPredicted RBP9.31□□□□□ -0.92
LIG3-203ENST00000585370 ZNF829Q3KNS6 432 aaPredicted RBP9.31□□□□□ -0.92
LIG3-203ENST00000585370 ZNF404Q494X3 552 aa9.31□□□□□ -0.92
LIG3-203ENST00000585370 CDONQ4KMG0 1287 aa9.31□□□□□ -0.92
LIG3-203ENST00000585370 ZNF468Q5VIY5 522 aaPredicted RBP9.31□□□□□ -0.92
LIG3-203ENST00000585370 B3GNTL1Q67FW5 361 aaPredicted RBP9.31□□□□□ -0.92
LIG3-203ENST00000585370 RPL22L1Q6P5R6 122 aaKnown RBP9.31□□□□□ -0.92
LIG3-203ENST00000585370 PAMR1Q6UXH9 720 aa9.31□□□□□ -0.92
LIG3-203ENST00000585370 B3GLCTQ6Y288 498 aa9.31□□□□□ -0.92
LIG3-203ENST00000585370 SLC35D2Q76EJ3 337 aa9.31□□□□□ -0.92
LIG3-203ENST00000585370 VASH1Q7L8A9 365 aaPredicted RBP9.31□□□□□ -0.92
LIG3-203ENST00000585370 KLBQ86Z14 1044 aa9.31□□□□□ -0.92
LIG3-203ENST00000585370 UEVLDQ8IX04 471 aa9.31□□□□□ -0.92
LIG3-203ENST00000585370 OR6V1Q8N148 313 aa9.31□□□□□ -0.92
LIG3-203ENST00000585370 ASB17Q8WXJ9 295 aa9.31□□□□□ -0.92
LIG3-203ENST00000585370 ADAD1Q96M93 576 aaKnown RBP9.31□□□□□ -0.92
LIG3-203ENST00000585370 KLHL15Q96M94 604 aa9.31□□□□□ -0.92
LIG3-203ENST00000585370 JSRP1Q96MG2 331 aaPredicted RBP9.31□□□□□ -0.92
LIG3-203ENST00000585370 KCTD7Q96MP8 289 aa9.31□□□□□ -0.92
LIG3-203ENST00000585370 GNRHR2Q96P88 292 aa9.31□□□□□ -0.92
LIG3-203ENST00000585370 RBP7Q96R05 134 aa9.31□□□□□ -0.92
LIG3-203ENST00000585370 OR5B2Q96R09 309 aa9.31□□□□□ -0.92
LIG3-203ENST00000585370 FAM173AQ9BQD7 235 aa9.31□□□□□ -0.92
LIG3-203ENST00000585370 CENPOQ9BU64 300 aa9.31□□□□□ -0.92
LIG3-203ENST00000585370 NXF2Q9GZY0 626 aaKnown RBP9.31□□□□□ -0.92
LIG3-203ENST00000585370 TSPAN10Q9H1Z9 355 aaPredicted RBP9.31□□□□□ -0.92
LIG3-203ENST00000585370 KCNN2Q9H2S1 579 aa9.31□□□□□ -0.92
LIG3-203ENST00000585370 ZFP64Q9NPA5 681 aa9.31□□□□□ -0.92
LIG3-203ENST00000585370 CRNNQ9UBG3 495 aaPredicted RBP9.31□□□□□ -0.92
LIG3-203ENST00000585370 B9D1Q9UPM9 204 aa9.31□□□□□ -0.92
LIG3-203ENST00000585370 POLHQ9Y253 713 aa9.31□□□□□ -0.92
LIG3-203ENST00000585370 ICE1Q9Y2F5 2266 aa9.31□□□□□ -0.92
LIG3-203ENST00000585370 A0A075B6Q4 140 aa9.3□□□□□ -0.92
LIG3-203ENST00000585370 SLC22A23A1A5C7 686 aa9.3□□□□□ -0.92
LIG3-203ENST00000585370 J3QLW9 94 aa9.3□□□□□ -0.92
LIG3-203ENST00000585370 KHDRBS3O75525 346 aaKnown RBP9.3□□□□□ -0.92
LIG3-203ENST00000585370 SERPINI2O75830 405 aa9.3□□□□□ -0.92
LIG3-203ENST00000585370 SULT1C4O75897 302 aa9.3□□□□□ -0.92
LIG3-203ENST00000585370 PDGFAP04085 211 aa9.3□□□□□ -0.92
LIG3-203ENST00000585370 MRPL3P09001 348 aaKnown RBP9.3□□□□□ -0.92
LIG3-203ENST00000585370 ZNF19P17023 458 aa9.3□□□□□ -0.92
LIG3-203ENST00000585370 PYCR1P32322 319 aa9.3□□□□□ -0.92
LIG3-203ENST00000585370 CD97P48960 835 aa9.3□□□□□ -0.92
LIG3-203ENST00000585370 TGM4P49221 684 aa9.3□□□□□ -0.92
LIG3-203ENST00000585370 RORCP51449 518 aa9.3□□□□□ -0.92
LIG3-203ENST00000585370 DCTN2Q13561 401 aaKnown RBP9.3□□□□□ -0.92
LIG3-203ENST00000585370 PDSS1Q5T2R2 415 aa9.3□□□□□ -0.92
LIG3-203ENST00000585370 RAET1LQ5VY80 246 aa9.3□□□□□ -0.92
LIG3-203ENST00000585370 TMEM225Q6GV28 225 aa9.3□□□□□ -0.92
LIG3-203ENST00000585370 ASB18Q6ZVZ8 466 aa9.3□□□□□ -0.92
LIG3-203ENST00000585370 MDGA2Q7Z553 956 aa9.3□□□□□ -0.92
LIG3-203ENST00000585370 TIGD4Q8IY51 512 aa9.3□□□□□ -0.92
LIG3-203ENST00000585370 PM20D2Q8IYS1 436 aa9.3□□□□□ -0.92
LIG3-203ENST00000585370 ZNF454Q8N9F8 522 aa9.3□□□□□ -0.92
LIG3-203ENST00000585370 MCFD2Q8NI22 146 aa9.3□□□□□ -0.92
LIG3-203ENST00000585370 ASB10Q8WXI3 467 aa9.3□□□□□ -0.92
LIG3-203ENST00000585370 PHYHIPQ92561 330 aa9.3□□□□□ -0.92
LIG3-203ENST00000585370 C4orf36Q96KX1 117 aa9.3□□□□□ -0.92
LIG3-203ENST00000585370 INTS14Q96SY0 518 aa9.3□□□□□ -0.92
LIG3-203ENST00000585370 TBX5Q99593 518 aa9.3□□□□□ -0.92
LIG3-203ENST00000585370 TIMP4Q99727 224 aa9.3□□□□□ -0.92
LIG3-203ENST00000585370 NPAS1Q99742 590 aa9.3□□□□□ -0.92
LIG3-203ENST00000585370 OR2B2Q9GZK3 357 aa9.3□□□□□ -0.92
LIG3-203ENST00000585370 WDR12Q9GZL7 423 aaKnown RBP9.3□□□□□ -0.92
LIG3-203ENST00000585370 SLIRPQ9GZT3 109 aaKnown RBP9.3□□□□□ -0.92
LIG3-203ENST00000585370 NUAK2Q9H093 628 aa9.3□□□□□ -0.92
LIG3-203ENST00000585370 RNF32Q9H0A6 362 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms