RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 MAGIXQ9H6Y5 334 aa14.45□□□□□ -0.1
CDT1-202ENST00000562747 POFUT2Q9Y2G5 429 aa14.45□□□□□ -0.1
CDT1-202ENST00000562747 ATRQ13535 2644 aa14.44□□□□□ -0.1
CDT1-202ENST00000562747 TRAV27A0A087WT01 109 aa14.44□□□□□ -0.1
CDT1-202ENST00000562747 TRBV4-1A0A0J9YWV2 114 aa14.44□□□□□ -0.1
CDT1-202ENST00000562747 SHISA9B4DS77 424 aa14.44□□□□□ -0.1
CDT1-202ENST00000562747 CDC42EP2O14613 210 aa14.44□□□□□ -0.1
CDT1-202ENST00000562747 GYG2O15488 501 aa14.44□□□□□ -0.1
CDT1-202ENST00000562747 TMCC2O75069 709 aa14.44□□□□□ -0.1
CDT1-202ENST00000562747 STAMBPO95630 424 aa14.44□□□□□ -0.1
CDT1-202ENST00000562747 IGHMP01871 453 aa14.44□□□□□ -0.1
CDT1-202ENST00000562747 ACADSP16219 412 aa14.44□□□□□ -0.1
CDT1-202ENST00000562747 GPR4P46093 362 aa14.44□□□□□ -0.1
CDT1-202ENST00000562747 CLRN1P58418 232 aa14.44□□□□□ -0.1
CDT1-202ENST00000562747 SPIBQ01892 262 aa14.44□□□□□ -0.1
CDT1-202ENST00000562747 FHL1Q13642 323 aa14.44□□□□□ -0.1
CDT1-202ENST00000562747 HIST3H3Q16695 136 aa14.44□□□□□ -0.1
CDT1-202ENST00000562747 ARMC4Q5T2S8 1044 aa14.44□□□□□ -0.1
CDT1-202ENST00000562747 MEX3DQ86XN8 651 aaKnown RBP14.44□□□□□ -0.1
CDT1-202ENST00000562747 PIAS4Q8N2W9 510 aaPredicted RBP14.44□□□□□ -0.1
CDT1-202ENST00000562747 LRRC75AQ8NAA5 344 aa14.44□□□□□ -0.1
CDT1-202ENST00000562747 NOXO1Q8NFA2 376 aa14.44□□□□□ -0.1
CDT1-202ENST00000562747 OR4K5Q8NGD3 323 aa14.44□□□□□ -0.1
CDT1-202ENST00000562747 OR13C2Q8NGS9 318 aa14.44□□□□□ -0.1
CDT1-202ENST00000562747 OR52J3Q8NH60 311 aa14.44□□□□□ -0.1
CDT1-202ENST00000562747 OR51A7Q8NH64 312 aa14.44□□□□□ -0.1
CDT1-202ENST00000562747 FBXW5Q969U6 566 aa14.44□□□□□ -0.1
CDT1-202ENST00000562747 TNFRSF13CQ96RJ3 184 aa14.44□□□□□ -0.1
CDT1-202ENST00000562747 FOXB1Q99853 325 aa14.44□□□□□ -0.1
CDT1-202ENST00000562747 MRPL13Q9BYD1 178 aaKnown RBP14.44□□□□□ -0.1
CDT1-202ENST00000562747 NDEL1Q9GZM8 345 aa14.44□□□□□ -0.1
CDT1-202ENST00000562747 CRNNQ9UBG3 495 aaPredicted RBP14.44□□□□□ -0.1
CDT1-202ENST00000562747 ALPK2Q86TB3 2170 aa14.43□□□□□ -0.1
CDT1-202ENST00000562747 CUBNO60494 3623 aa14.43□□□□□ -0.1
CDT1-202ENST00000562747 SH3PXD2BA1X283 911 aa14.43□□□□□ -0.1
CDT1-202ENST00000562747 ENTPD5O75356 428 aa14.43□□□□□ -0.1
CDT1-202ENST00000562747 TRMUO75648 421 aaKnown RBP14.43□□□□□ -0.1
CDT1-202ENST00000562747 NR2C1P13056 603 aa14.43□□□□□ -0.1
CDT1-202ENST00000562747 RRM2P31350 389 aa14.43□□□□□ -0.1
CDT1-202ENST00000562747 MAGEA2P43356 314 aa14.43□□□□□ -0.1
CDT1-202ENST00000562747 OMPP47874 163 aa14.43□□□□□ -0.1
CDT1-202ENST00000562747 LIMS1P48059 325 aa14.43□□□□□ -0.1
CDT1-202ENST00000562747 CTXN1P60606 82 aa14.43□□□□□ -0.1
CDT1-202ENST00000562747 PPP2R2BQ00005 443 aa14.43□□□□□ -0.1
CDT1-202ENST00000562747 RUNX1T1Q06455 604 aa14.43□□□□□ -0.1
CDT1-202ENST00000562747 TRAP1Q12931 704 aaKnown RBP14.43□□□□□ -0.1
CDT1-202ENST00000562747 SEC23BQ15437 767 aa14.43□□□□□ -0.1
CDT1-202ENST00000562747 ZBED5Q49AG3 693 aa14.43□□□□□ -0.1
CDT1-202ENST00000562747 FAM205BPQ63HN1 556 aa14.43□□□□□ -0.1
CDT1-202ENST00000562747 ZNF813Q6ZN06 617 aa14.43□□□□□ -0.1
CDT1-202ENST00000562747 DEPDC4Q8N2C3 294 aa14.43□□□□□ -0.1
CDT1-202ENST00000562747 CCDC124Q96CT7 223 aaKnown RBP14.43□□□□□ -0.1
CDT1-202ENST00000562747 SLC7A6OSQ96CW6 309 aaPredicted RBP14.43□□□□□ -0.1
CDT1-202ENST00000562747 FAM46AQ96IP4 442 aaKnown RBP14.43□□□□□ -0.1
CDT1-202ENST00000562747 CLPTM1LQ96KA5 538 aa14.43□□□□□ -0.1
CDT1-202ENST00000562747 LRGUKQ96M69 825 aa14.43□□□□□ -0.1
CDT1-202ENST00000562747 SLC38A2Q96QD8 506 aa14.43□□□□□ -0.1
CDT1-202ENST00000562747 BTBD10Q9BSF8 475 aa14.43□□□□□ -0.1
CDT1-202ENST00000562747 REPIN1Q9BWE0 567 aaKnown RBP14.43□□□□□ -0.1
CDT1-202ENST00000562747 RTTNQ86VV8 2226 aa14.43□□□□□ -0.1
CDT1-202ENST00000562747 ROS1P08922 2347 aa14.42□□□□□ -0.1
CDT1-202ENST00000562747 ACOT8O14734 319 aa14.42□□□□□ -0.1
CDT1-202ENST00000562747 DHHO43323 396 aa14.42□□□□□ -0.1
CDT1-202ENST00000562747 KRT36O76013 467 aa14.42□□□□□ -0.1
CDT1-202ENST00000562747 SEC14L2O76054 403 aa14.42□□□□□ -0.1
CDT1-202ENST00000562747 IGKV3-15P01624 115 aa14.42□□□□□ -0.1
CDT1-202ENST00000562747 QDPRP09417 244 aa14.42□□□□□ -0.1
CDT1-202ENST00000562747 CBR1P16152 277 aa14.42□□□□□ -0.1
CDT1-202ENST00000562747 ZNF133P52736 654 aaPredicted RBP14.42□□□□□ -0.1
CDT1-202ENST00000562747 CDH11P55287 796 aa14.42□□□□□ -0.1
CDT1-202ENST00000562747 RPL27P61353 136 aaKnown RBP14.42□□□□□ -0.1
CDT1-202ENST00000562747 BNIP1Q12981 228 aa14.42□□□□□ -0.1
CDT1-202ENST00000562747 LRFN4Q6PJG9 635 aa14.42□□□□□ -0.1
CDT1-202ENST00000562747 SLC22A25Q6T423 547 aa14.42□□□□□ -0.1
CDT1-202ENST00000562747 NANOS1Q8WY41 292 aaKnown RBP14.42□□□□□ -0.1
CDT1-202ENST00000562747 NEUROG1Q92886 237 aa14.42□□□□□ -0.1
CDT1-202ENST00000562747 MCHR2Q969V1 340 aa14.42□□□□□ -0.1
CDT1-202ENST00000562747 ALG12Q9BV10 488 aa14.42□□□□□ -0.1
CDT1-202ENST00000562747 TRIM15Q9C019 465 aa14.42□□□□□ -0.1
CDT1-202ENST00000562747 CISD1Q9NZ45 108 aaKnown RBP14.42□□□□□ -0.1
CDT1-202ENST00000562747 ZNF346Q9UL40 294 aaKnown RBP14.42□□□□□ -0.1
CDT1-202ENST00000562747 AURKCQ9UQB9 309 aa14.42□□□□□ -0.1
CDT1-202ENST00000562747 CHD3Q12873 2000 aaKnown RBP14.41□□□□□ -0.1
CDT1-202ENST00000562747 IGHV1-18A0A0C4DH31 117 aa14.41□□□□□ -0.1
CDT1-202ENST00000562747 PTP4A3O75365 173 aa14.41□□□□□ -0.1
CDT1-202ENST00000562747 IGLV1-44P01699 117 aa14.41□□□□□ -0.1
CDT1-202ENST00000562747 B4GALT1P15291 398 aa14.41□□□□□ -0.1
CDT1-202ENST00000562747 PAX1P15863 534 aa14.41□□□□□ -0.1
CDT1-202ENST00000562747 ARR3P36575 388 aa14.41□□□□□ -0.1
CDT1-202ENST00000562747 IFNGR2P38484 337 aa14.41□□□□□ -0.1
CDT1-202ENST00000562747 CAPZA2P47755 286 aa14.41□□□□□ -0.1
CDT1-202ENST00000562747 HMGA2P52926 109 aa14.41□□□□□ -0.1
CDT1-202ENST00000562747 TUBA1BP68363 451 aa14.41□□□□□ -0.1
CDT1-202ENST00000562747 TUBA4AP68366 448 aa14.41□□□□□ -0.1
CDT1-202ENST00000562747 CHRNB3Q05901 458 aa14.41□□□□□ -0.1
CDT1-202ENST00000562747 SPOCK1Q08629 439 aa14.41□□□□□ -0.1
CDT1-202ENST00000562747 TOP3AQ13472 1001 aaPredicted RBP14.41□□□□□ -0.1
CDT1-202ENST00000562747 NRN1LQ496H8 165 aa14.41□□□□□ -0.1
CDT1-202ENST00000562747 FAM98BQ52LJ0 330 aaKnown RBP14.41□□□□□ -0.1
CDT1-202ENST00000562747 PGM2L1Q6PCE3 622 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms