RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 NIPAL3Q6P499 406 aa19.94■□□□□ 0.78
SYNGR3-202ENST00000562045 SLC35D2Q76EJ3 337 aa19.94■□□□□ 0.78
SYNGR3-202ENST00000562045 CHMP1BQ7LBR1 199 aa19.94■□□□□ 0.78
SYNGR3-202ENST00000562045 MYDGFQ969H8 173 aa19.94■□□□□ 0.78
SYNGR3-202ENST00000562045 DDOQ99489 341 aa19.94■□□□□ 0.78
SYNGR3-202ENST00000562045 MED20Q9H944 212 aa19.94■□□□□ 0.78
SYNGR3-202ENST00000562045 INTS1Q8N201 2190 aaKnown RBP19.94■□□□□ 0.78
SYNGR3-202ENST00000562045 IGHV3-15A0A0B4J1V0 119 aa19.93■□□□□ 0.78
SYNGR3-202ENST00000562045 A6NIZ1 184 aa19.93■□□□□ 0.78
SYNGR3-202ENST00000562045 SLC22A20A6NK97 555 aa19.93■□□□□ 0.78
SYNGR3-202ENST00000562045 ATP6V1B1P15313 513 aa19.93■□□□□ 0.78
SYNGR3-202ENST00000562045 CEACAM8P31997 349 aaPredicted RBP19.93■□□□□ 0.78
SYNGR3-202ENST00000562045 CDKN2AP42771 156 aaKnown RBP19.93■□□□□ 0.78
SYNGR3-202ENST00000562045 RAP1BP61224 184 aa19.93■□□□□ 0.78
SYNGR3-202ENST00000562045 RAP1AP62834 184 aa19.93■□□□□ 0.78
SYNGR3-202ENST00000562045 POU4F3Q15319 338 aa19.93■□□□□ 0.78
SYNGR3-202ENST00000562045 ARMC4Q5T2S8 1044 aa19.93■□□□□ 0.78
SYNGR3-202ENST00000562045 TMEM211Q6ICI0 200 aa19.93■□□□□ 0.78
SYNGR3-202ENST00000562045 MRGPRGQ86SM5 289 aa19.93■□□□□ 0.78
SYNGR3-202ENST00000562045 LIX1LQ8IVB5 337 aa19.93■□□□□ 0.78
SYNGR3-202ENST00000562045 GCNT2Q8N0V5 402 aa19.93■□□□□ 0.78
SYNGR3-202ENST00000562045 SSC4DQ8WTU2 575 aa19.93■□□□□ 0.78
SYNGR3-202ENST00000562045 ROBO4Q8WZ75 1007 aa19.93■□□□□ 0.78
SYNGR3-202ENST00000562045 SGCDQ92629 289 aa19.93■□□□□ 0.78
SYNGR3-202ENST00000562045 RND1Q92730 232 aa19.93■□□□□ 0.78
SYNGR3-202ENST00000562045 SNX18Q96RF0 628 aa19.93■□□□□ 0.78
SYNGR3-202ENST00000562045 HCAR1Q9BXC0 346 aa19.93■□□□□ 0.78
SYNGR3-202ENST00000562045 OR6C68A6NDL8 312 aa19.93■□□□□ 0.78
SYNGR3-202ENST00000562045 SLC22A31A6NKX4 558 aa19.93■□□□□ 0.78
SYNGR3-202ENST00000562045 SMAD9O15198 467 aaKnown RBP19.93■□□□□ 0.78
SYNGR3-202ENST00000562045 ARHGEF9O43307 516 aa19.93■□□□□ 0.78
SYNGR3-202ENST00000562045 RGS10O43665 173 aa19.93■□□□□ 0.78
SYNGR3-202ENST00000562045 CLPTM1O96005 669 aa19.93■□□□□ 0.78
SYNGR3-202ENST00000562045 RENP00797 406 aa19.93■□□□□ 0.78
SYNGR3-202ENST00000562045 TIMP3P35625 211 aa19.93■□□□□ 0.78
SYNGR3-202ENST00000562045 MTNR1AP48039 350 aa19.93■□□□□ 0.78
SYNGR3-202ENST00000562045 TMED1Q13445 227 aa19.93■□□□□ 0.78
SYNGR3-202ENST00000562045 BLMHQ13867 455 aa19.93■□□□□ 0.78
SYNGR3-202ENST00000562045 MELKQ14680 651 aa19.93■□□□□ 0.78
SYNGR3-202ENST00000562045 KLHL12Q53G59 568 aa19.93■□□□□ 0.78
SYNGR3-202ENST00000562045 MEPCEQ7L2J0 689 aaKnown RBP19.93■□□□□ 0.78
SYNGR3-202ENST00000562045 HDDC2Q7Z4H3 204 aa19.93■□□□□ 0.78
SYNGR3-202ENST00000562045 ASB10Q8WXI3 467 aa19.93■□□□□ 0.78
SYNGR3-202ENST00000562045 WNT2BQ93097 391 aa19.93■□□□□ 0.78
SYNGR3-202ENST00000562045 SF3B5Q9BWJ5 86 aaKnown RBP19.93■□□□□ 0.78
SYNGR3-202ENST00000562045 NMNAT2Q9BZQ4 307 aa19.93■□□□□ 0.78
SYNGR3-202ENST00000562045 CCDC90BQ9GZT6 254 aa19.93■□□□□ 0.78
SYNGR3-202ENST00000562045 OR51V1Q9H2C8 321 aa19.93■□□□□ 0.78
SYNGR3-202ENST00000562045 SNX5Q9Y5X3 404 aa19.93■□□□□ 0.78
SYNGR3-202ENST00000562045 DOPEY2Q9Y3R5 2298 aa19.92■□□□□ 0.78
SYNGR3-202ENST00000562045 IRGMA1A4Y4 181 aa19.92■□□□□ 0.78
SYNGR3-202ENST00000562045 TRIM64CA6NLI5 447 aa19.92■□□□□ 0.78
SYNGR3-202ENST00000562045 RAMP1O60894 148 aa19.92■□□□□ 0.78
SYNGR3-202ENST00000562045 LGALS3BPQ08380 585 aa19.92■□□□□ 0.78
SYNGR3-202ENST00000562045 KLHL22Q53GT1 634 aa19.92■□□□□ 0.78
SYNGR3-202ENST00000562045 RIPPLY2Q5TAB7 128 aa19.92■□□□□ 0.78
SYNGR3-202ENST00000562045 PRSS48Q7RTY5 328 aa19.92■□□□□ 0.78
SYNGR3-202ENST00000562045 STX19Q8N4C7 294 aa19.92■□□□□ 0.78
SYNGR3-202ENST00000562045 OR9Q1Q8NGQ5 310 aa19.92■□□□□ 0.78
SYNGR3-202ENST00000562045 MRPS18AQ9NVS2 196 aaKnown RBP19.92■□□□□ 0.78
SYNGR3-202ENST00000562045 MED29Q9NX70 200 aa19.92■□□□□ 0.78
SYNGR3-202ENST00000562045 ERVK-18Q9QC07 812 aa19.92■□□□□ 0.78
SYNGR3-202ENST00000562045 WARS2Q9UGM6 360 aaKnown RBP19.92■□□□□ 0.78
SYNGR3-202ENST00000562045 SPTBN1Q01082 2364 aaKnown RBP19.92■□□□□ 0.78
SYNGR3-202ENST00000562045 PRSS37A4D1T9 235 aa19.91■□□□□ 0.78
SYNGR3-202ENST00000562045 TRAF3IP2O43734 574 aaPredicted RBP19.91■□□□□ 0.78
SYNGR3-202ENST00000562045 HTR1AP08908 422 aa19.91■□□□□ 0.78
SYNGR3-202ENST00000562045 SLC2A5P22732 501 aa19.91■□□□□ 0.78
SYNGR3-202ENST00000562045 SLC25A1P53007 311 aa19.91■□□□□ 0.78
SYNGR3-202ENST00000562045 PER3P56645 1201 aa19.91■□□□□ 0.78
SYNGR3-202ENST00000562045 RPS7P62081 194 aaKnown RBP19.91■□□□□ 0.78
SYNGR3-202ENST00000562045 PIGFQ07326 219 aa19.91■□□□□ 0.78
SYNGR3-202ENST00000562045 ST3GAL4Q11206 333 aa19.91■□□□□ 0.78
SYNGR3-202ENST00000562045 RAB40BQ12829 278 aa19.91■□□□□ 0.78
SYNGR3-202ENST00000562045 SF3B4Q15427 424 aaKnown RBP eCLIP19.91■□□□□ 0.78
SYNGR3-202ENST00000562045 MTFR2Q6P444 385 aa19.91■□□□□ 0.78
SYNGR3-202ENST00000562045 NHLRC1Q6VVB1 395 aa19.91■□□□□ 0.78
SYNGR3-202ENST00000562045 INTS12Q96CB8 462 aaKnown RBP19.91■□□□□ 0.78
SYNGR3-202ENST00000562045 RNFT2Q96EX2 444 aa19.91■□□□□ 0.78
SYNGR3-202ENST00000562045 RPRD1BQ9NQG5 326 aaKnown RBP19.91■□□□□ 0.78
SYNGR3-202ENST00000562045 KLHL13Q9P2N7 655 aa19.91■□□□□ 0.78
SYNGR3-202ENST00000562045 CDK1P06493 297 aa19.9■□□□□ 0.78
SYNGR3-202ENST00000562045 CLUP10909 449 aa19.9■□□□□ 0.78
SYNGR3-202ENST00000562045 SLC16A1P53985 500 aa19.9■□□□□ 0.78
SYNGR3-202ENST00000562045 P4HA3Q7Z4N8 544 aa19.9■□□□□ 0.78
SYNGR3-202ENST00000562045 TXNDC15Q96J42 360 aa19.9■□□□□ 0.78
SYNGR3-202ENST00000562045 SIGLEC11Q96RL6 698 aa19.9■□□□□ 0.78
SYNGR3-202ENST00000562045 TEAD3Q99594 435 aa19.9■□□□□ 0.78
SYNGR3-202ENST00000562045 RNF122Q9H9V4 155 aa19.9■□□□□ 0.78
SYNGR3-202ENST00000562045 ZNF175Q9Y473 711 aa19.9■□□□□ 0.78
SYNGR3-202ENST00000562045 CACNA1CQ13936 2221 aa19.9■□□□□ 0.78
SYNGR3-202ENST00000562045 BAHCC1Q9P281 2608 aa19.9■□□□□ 0.78
SYNGR3-202ENST00000562045 ADGRG4Q8IZF6 3080 aa19.9■□□□□ 0.78
SYNGR3-202ENST00000562045 H7C1C5 153 aa19.9■□□□□ 0.78
SYNGR3-202ENST00000562045 GYPBP06028 91 aa19.9■□□□□ 0.78
SYNGR3-202ENST00000562045 SPI1P17947 270 aa19.9■□□□□ 0.78
SYNGR3-202ENST00000562045 BIDP55957 195 aa19.9■□□□□ 0.78
SYNGR3-202ENST00000562045 LCN6P62502 163 aa19.9■□□□□ 0.78
SYNGR3-202ENST00000562045 SLC17A1Q14916 467 aa19.9■□□□□ 0.78
SYNGR3-202ENST00000562045 SLC35D3Q5M8T2 416 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms