RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 SPATA3Q8NHX4 192 aa12.18□□□□□ -0.46
TPM1-223ENST00000560445 TMEM239Q8WW34 195 aa12.18□□□□□ -0.46
TPM1-223ENST00000560445 HPS1Q92902 700 aa12.18□□□□□ -0.46
TPM1-223ENST00000560445 MRPL24Q96A35 216 aaKnown RBP12.18□□□□□ -0.46
TPM1-223ENST00000560445 ZNF837Q96EG3 531 aaPredicted RBP12.18□□□□□ -0.46
TPM1-223ENST00000560445 DOK1Q99704 481 aa12.18□□□□□ -0.46
TPM1-223ENST00000560445 CCDC134Q9H6E4 229 aa12.18□□□□□ -0.46
TPM1-223ENST00000560445 RNF121Q9H920 327 aa12.18□□□□□ -0.46
TPM1-223ENST00000560445 SMURF2Q9HAU4 748 aa12.18□□□□□ -0.46
TPM1-223ENST00000560445 CDH20Q9HBT6 801 aa12.18□□□□□ -0.46
TPM1-223ENST00000560445 INIPQ9NRY2 104 aa12.18□□□□□ -0.46
TPM1-223ENST00000560445 TMEM38BQ9NVV0 291 aa12.18□□□□□ -0.46
TPM1-223ENST00000560445 ZNF446Q9NWS9 450 aa12.18□□□□□ -0.46
TPM1-223ENST00000560445 RIMS3Q9UJD0 308 aa12.18□□□□□ -0.46
TPM1-223ENST00000560445 IQCMA0A1B0GVH7 501 aa12.17□□□□□ -0.46
TPM1-223ENST00000560445 ELOVL7A1L3X0 281 aa12.17□□□□□ -0.46
TPM1-223ENST00000560445 LRRN3E7EW58 273 aa12.17□□□□□ -0.46
TPM1-223ENST00000560445 FXYD1O00168 92 aa12.17□□□□□ -0.46
TPM1-223ENST00000560445 OR7A10O76100 309 aa12.17□□□□□ -0.46
TPM1-223ENST00000560445 PGA4P0DJD7 388 aa12.17□□□□□ -0.46
TPM1-223ENST00000560445 PGA3P0DJD8 388 aa12.17□□□□□ -0.46
TPM1-223ENST00000560445 ZNF23P17027 643 aa12.17□□□□□ -0.46
TPM1-223ENST00000560445 GIFP27352 417 aa12.17□□□□□ -0.46
TPM1-223ENST00000560445 THBS2P35442 1172 aa12.17□□□□□ -0.46
TPM1-223ENST00000560445 GZMMP51124 257 aa12.17□□□□□ -0.46
TPM1-223ENST00000560445 PIGFQ07326 219 aa12.17□□□□□ -0.46
TPM1-223ENST00000560445 SF3A3Q12874 501 aaKnown RBP eCLIP12.17□□□□□ -0.469e-9■■■■□ 23.4
TPM1-223ENST00000560445 TBC1D28Q2M2D7 210 aa12.17□□□□□ -0.46
TPM1-223ENST00000560445 CYBRD1Q53TN4 286 aa12.17□□□□□ -0.46
TPM1-223ENST00000560445 PHYHD1Q5SRE7 291 aa12.17□□□□□ -0.46
TPM1-223ENST00000560445 NHLRC1Q6VVB1 395 aa12.17□□□□□ -0.46
TPM1-223ENST00000560445 WDR88Q6ZMY6 472 aa12.17□□□□□ -0.46
TPM1-223ENST00000560445 SLC16A14Q7RTX9 510 aa12.17□□□□□ -0.46
TPM1-223ENST00000560445 RBM45Q8IUH3 476 aaKnown RBP12.17□□□□□ -0.46
TPM1-223ENST00000560445 C1orf174Q8IYL3 243 aa12.17□□□□□ -0.46
TPM1-223ENST00000560445 ZNF786Q8N393 782 aa12.17□□□□□ -0.46
TPM1-223ENST00000560445 ANKS4BQ8N8V4 417 aa12.17□□□□□ -0.46
TPM1-223ENST00000560445 NOXO1Q8NFA2 376 aa12.17□□□□□ -0.46
TPM1-223ENST00000560445 RP9Q8TA86 221 aaKnown RBP12.17□□□□□ -0.46
TPM1-223ENST00000560445 UBASH3BQ8TF42 649 aa12.17□□□□□ -0.46
TPM1-223ENST00000560445 C10orf82Q8WW14 230 aa12.17□□□□□ -0.46
TPM1-223ENST00000560445 LIPHQ8WWY8 451 aa12.17□□□□□ -0.46
TPM1-223ENST00000560445 TMEM158Q8WZ71 300 aa12.17□□□□□ -0.46
TPM1-223ENST00000560445 MS4A3Q96HJ5 214 aa12.17□□□□□ -0.46
TPM1-223ENST00000560445 PRRC1Q96M27 445 aa12.17□□□□□ -0.46
TPM1-223ENST00000560445 WFDC6Q9BQY6 131 aa12.17□□□□□ -0.46
TPM1-223ENST00000560445 TAS2R5Q9NYW4 299 aa12.17□□□□□ -0.46
TPM1-223ENST00000560445 RTTNQ86VV8 2226 aa12.17□□□□□ -0.46
TPM1-223ENST00000560445 A0A1W2PPW3 197 aa12.16□□□□□ -0.46
TPM1-223ENST00000560445 ATP8B1O43520 1251 aa12.16□□□□□ -0.46
TPM1-223ENST00000560445 GPRIN2O60269 458 aa12.16□□□□□ -0.46
TPM1-223ENST00000560445 LMX1BO60663 402 aa12.16□□□□□ -0.46
TPM1-223ENST00000560445 LYPD3O95274 346 aa12.16□□□□□ -0.46
TPM1-223ENST00000560445 IFNW1P05000 195 aa12.16□□□□□ -0.46
TPM1-223ENST00000560445 QDPRP09417 244 aa12.16□□□□□ -0.46
TPM1-223ENST00000560445 IGHV4-31P0DP07 118 aa12.16□□□□□ -0.46
TPM1-223ENST00000560445 ZNF35P13682 527 aa12.16□□□□□ -0.46
TPM1-223ENST00000560445 ZNF16P17020 682 aaPredicted RBP12.16□□□□□ -0.46
TPM1-223ENST00000560445 FUT1P19526 365 aa12.16□□□□□ -0.46
TPM1-223ENST00000560445 KDELR2P33947 212 aa12.16□□□□□ -0.46
TPM1-223ENST00000560445 MDH1P40925 334 aaKnown RBP12.16□□□□□ -0.46
TPM1-223ENST00000560445 MRPS11P82912 194 aaKnown RBP12.16□□□□□ -0.46
TPM1-223ENST00000560445 CXXC5Q7LFL8 322 aaKnown RBP12.16□□□□□ -0.46
TPM1-223ENST00000560445 CYP4Z1Q86W10 505 aa12.16□□□□□ -0.46
TPM1-223ENST00000560445 MICU2Q8IYU8 434 aa12.16□□□□□ -0.46
TPM1-223ENST00000560445 CDK20Q8IZL9 346 aa12.16□□□□□ -0.46
TPM1-223ENST00000560445 RBM15BQ8NDT2 890 aaKnown RBP12.16□□□□□ -0.46
TPM1-223ENST00000560445 SLC30A7Q8NEW0 376 aa12.16□□□□□ -0.46
TPM1-223ENST00000560445 SNX33Q8WV41 574 aa12.16□□□□□ -0.46
TPM1-223ENST00000560445 FOXN4Q96NZ1 517 aa12.16□□□□□ -0.46
TPM1-223ENST00000560445 HOPXQ9BPY8 73 aaPredicted RBP12.16□□□□□ -0.46
TPM1-223ENST00000560445 BCL2L14Q9BZR8 327 aa12.16□□□□□ -0.46
TPM1-223ENST00000560445 SEC61A2Q9H9S3 476 aa12.16□□□□□ -0.46
TPM1-223ENST00000560445 CCNB1IP1Q9NPC3 277 aa12.16□□□□□ -0.46
TPM1-223ENST00000560445 SLCO1C1Q9NYB5 712 aa12.16□□□□□ -0.46
TPM1-223ENST00000560445 REV1Q9UBZ9 1251 aa12.16□□□□□ -0.46
TPM1-223ENST00000560445 LOC100289279A0A1B0GTE1 492 aa12.15□□□□□ -0.46
TPM1-223ENST00000560445 ZNF503-AS2A6NEH8 195 aa12.15□□□□□ -0.46
TPM1-223ENST00000560445 A6NIZ1 184 aa12.15□□□□□ -0.46
TPM1-223ENST00000560445 KIAA1324LA8MWY0 1029 aaPredicted RBP12.15□□□□□ -0.46
TPM1-223ENST00000560445 GSTA4O15217 222 aa12.15□□□□□ -0.46
TPM1-223ENST00000560445 STAMBPO95630 424 aa12.15□□□□□ -0.46
TPM1-223ENST00000560445 SNAP29O95721 258 aa12.15□□□□□ -0.46
TPM1-223ENST00000560445 ADRA2AP08913 450 aa12.15□□□□□ -0.46
TPM1-223ENST00000560445 ACADSP16219 412 aa12.15□□□□□ -0.46
TPM1-223ENST00000560445 RAD52P43351 418 aa12.15□□□□□ -0.46
TPM1-223ENST00000560445 RAP1BP61224 184 aa12.15□□□□□ -0.46
TPM1-223ENST00000560445 RAP1AP62834 184 aa12.15□□□□□ -0.46
TPM1-223ENST00000560445 SELENOWP63302 87 aa12.15□□□□□ -0.46
TPM1-223ENST00000560445 HSF2Q03933 536 aa12.15□□□□□ -0.46
TPM1-223ENST00000560445 RPL18Q07020 188 aaKnown RBP12.15□□□□□ -0.46
TPM1-223ENST00000560445 MELKQ14680 651 aa12.15□□□□□ -0.46
TPM1-223ENST00000560445 FAM209AQ5JX71 171 aa12.15□□□□□ -0.46
TPM1-223ENST00000560445 RGS7BPQ6MZT1 257 aaPredicted RBP12.15□□□□□ -0.46
TPM1-223ENST00000560445 MYPOPQ86VE0 399 aaPredicted RBP12.15□□□□□ -0.46
TPM1-223ENST00000560445 OR4D11Q8NGI4 311 aa12.15□□□□□ -0.46
TPM1-223ENST00000560445 TMEM255BQ8WV15 326 aa12.15□□□□□ -0.46
TPM1-223ENST00000560445 GEMIN6Q8WXD5 167 aaKnown RBP12.15□□□□□ -0.46
TPM1-223ENST00000560445 TPD52L3Q96J77 140 aa12.15□□□□□ -0.46
TPM1-223ENST00000560445 ZNF583Q96ND8 569 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms