RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 DUX4L4P0CJ87 422 aa1.73□□□□□ -2.13
GABPB1-209ENST00000559100 DUX4L5P0CJ88 424 aa1.73□□□□□ -2.13
GABPB1-209ENST00000559100 DUX4L6P0CJ89 424 aa1.73□□□□□ -2.13
GABPB1-209ENST00000559100 DUX4L7P0CJ90 424 aa1.73□□□□□ -2.13
GABPB1-209ENST00000559100 ZNF250P15622 560 aa1.73□□□□□ -2.13
GABPB1-209ENST00000559100 SRMP19623 302 aa1.73□□□□□ -2.13
GABPB1-209ENST00000559100 GABRR1P24046 479 aa1.73□□□□□ -2.13
GABPB1-209ENST00000559100 BMI1P35226 326 aa1.73□□□□□ -2.13
GABPB1-209ENST00000559100 RBMXP38159 391 aaKnown RBP1.73□□□□□ -2.13
GABPB1-209ENST00000559100 RGRP47804 291 aa1.73□□□□□ -2.13
GABPB1-209ENST00000559100 TFPI2P48307 235 aa1.73□□□□□ -2.13
GABPB1-209ENST00000559100 MEOX2P50222 304 aa1.73□□□□□ -2.13
GABPB1-209ENST00000559100 APOC4P55056 127 aa1.73□□□□□ -2.13
GABPB1-209ENST00000559100 DLX1P56177 255 aa1.73□□□□□ -2.13
GABPB1-209ENST00000559100 ZNF92Q03936 586 aa1.73□□□□□ -2.13
GABPB1-209ENST00000559100 RAD51Q06609 339 aa1.73□□□□□ -2.13
GABPB1-209ENST00000559100 MAB21L1Q13394 359 aa1.73□□□□□ -2.13
GABPB1-209ENST00000559100 PRPSAP1Q14558 356 aa1.73□□□□□ -2.13
GABPB1-209ENST00000559100 ITIH4Q14624 930 aa1.73□□□□□ -2.13
GABPB1-209ENST00000559100 FCN2Q15485 313 aa1.73□□□□□ -2.13
GABPB1-209ENST00000559100 NRF1Q16656 503 aa1.73□□□□□ -2.13
GABPB1-209ENST00000559100 KCTD19Q17RG1 926 aaPredicted RBP1.73□□□□□ -2.13
GABPB1-209ENST00000559100 EOGTQ5NDL2 527 aa1.73□□□□□ -2.13
GABPB1-209ENST00000559100 GPR107Q5VW38 600 aa1.73□□□□□ -2.13
GABPB1-209ENST00000559100 MLIPQ5VWP3 458 aa1.73□□□□□ -2.13
GABPB1-209ENST00000559100 LCN12Q6JVE5 192 aa1.73□□□□□ -2.13
GABPB1-209ENST00000559100 DUX4L9Q6RFH8 374 aaPredicted RBP1.73□□□□□ -2.13
GABPB1-209ENST00000559100 SCARA5Q6ZMJ2 495 aa1.73□□□□□ -2.13
GABPB1-209ENST00000559100 RNF165Q6ZSG1 346 aa1.73□□□□□ -2.13
GABPB1-209ENST00000559100 OAFQ86UD1 273 aa1.73□□□□□ -2.13
GABPB1-209ENST00000559100 C17orf82Q86X59 251 aaPredicted RBP1.73□□□□□ -2.13
GABPB1-209ENST00000559100 PIANPQ8IYJ0 282 aa1.73□□□□□ -2.13
GABPB1-209ENST00000559100 MYOCDQ8IZQ8 938 aa1.73□□□□□ -2.13
GABPB1-209ENST00000559100 TMEM61Q8N0U2 210 aa1.73□□□□□ -2.13
GABPB1-209ENST00000559100 KIR2DL5AQ8N109 375 aa1.73□□□□□ -2.13
GABPB1-209ENST00000559100 GPD1LQ8N335 351 aa1.73□□□□□ -2.13
GABPB1-209ENST00000559100 PNKDQ8N490 385 aa1.73□□□□□ -2.13
GABPB1-209ENST00000559100 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP1.73□□□□□ -2.13
GABPB1-209ENST00000559100 INO80EQ8NBZ0 244 aaPredicted RBP1.73□□□□□ -2.13
GABPB1-209ENST00000559100 FBXL13Q8NEE6 735 aa1.73□□□□□ -2.13
GABPB1-209ENST00000559100 OR52E5Q8NH55 327 aa1.73□□□□□ -2.13
GABPB1-209ENST00000559100 KIR2DL5BQ8NHK3 375 aa1.73□□□□□ -2.13
GABPB1-209ENST00000559100 SPATA3Q8NHX4 192 aa1.73□□□□□ -2.13
GABPB1-209ENST00000559100 GEMIN6Q8WXD5 167 aaKnown RBP1.73□□□□□ -2.13
GABPB1-209ENST00000559100 ACOT11Q8WXI4 607 aaPredicted RBP1.73□□□□□ -2.13
GABPB1-209ENST00000559100 UCN3Q969E3 161 aa1.73□□□□□ -2.13
GABPB1-209ENST00000559100 EEF1AKMT3Q96AZ1 226 aa1.73□□□□□ -2.13
GABPB1-209ENST00000559100 APH1AQ96BI3 265 aa1.73□□□□□ -2.13
GABPB1-209ENST00000559100 RPUSD4Q96CM3 377 aaKnown RBP1.73□□□□□ -2.13
GABPB1-209ENST00000559100 LRRC39Q96DD0 335 aa1.73□□□□□ -2.13
GABPB1-209ENST00000559100 JSRP1Q96MG2 331 aaPredicted RBP1.73□□□□□ -2.13
GABPB1-209ENST00000559100 UCK2Q9BZX2 261 aa1.73□□□□□ -2.13
GABPB1-209ENST00000559100 GFRA4Q9GZZ7 299 aa1.73□□□□□ -2.13
GABPB1-209ENST00000559100 C20orf85Q9H1P6 137 aa1.73□□□□□ -2.13
GABPB1-209ENST00000559100 CLMPQ9H6B4 373 aa1.73□□□□□ -2.13
GABPB1-209ENST00000559100 CWH43Q9H720 699 aa1.73□□□□□ -2.13
GABPB1-209ENST00000559100 ZDHHC11Q9H8X9 412 aa1.73□□□□□ -2.13
GABPB1-209ENST00000559100 PEF1Q9UBV8 284 aaKnown RBP1.73□□□□□ -2.13
GABPB1-209ENST00000559100 DUX4Q9UBX2 424 aa1.73□□□□□ -2.13
GABPB1-209ENST00000559100 LGALS13Q9UHV8 139 aa1.73□□□□□ -2.13
GABPB1-209ENST00000559100 GNPTGQ9UJJ9 305 aa1.73□□□□□ -2.13
GABPB1-209ENST00000559100 FLVCR2Q9UPI3 526 aa1.73□□□□□ -2.13
GABPB1-209ENST00000559100 SLC17A4Q9Y2C5 497 aa1.73□□□□□ -2.13
GABPB1-209ENST00000559100 RHBDD3Q9Y3P4 386 aa1.73□□□□□ -2.13
GABPB1-209ENST00000559100 SAR1BQ9Y6B6 198 aa1.73□□□□□ -2.13
GABPB1-209ENST00000559100 COMMD3-BMI1R4GMX3 469 aa1.73□□□□□ -2.13
GABPB1-209ENST00000559100 TDRD15B5MCY1 1934 aaKnown RBP1.73□□□□□ -2.13
GABPB1-209ENST00000559100 FRMPD3Q5JV73 1810 aa1.73□□□□□ -2.13
GABPB1-209ENST00000559100 TNIKQ9UKE5 1360 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 MROH5Q6ZUA9 1318 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 CFAP65Q6ZU64 1925 aaKnown RBP1.72□□□□□ -2.13
GABPB1-209ENST00000559100 KCNE1BA0A087WTH5 132 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 TRBV9A0A0B4J1U6 114 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 A0A0B4J2A0 478 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 A0A1W2PPV4 95 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 A0A1W2PRD5 423 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 FAM231BA6NCW3 169 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 LYRM9A8MSI8 78 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 KRTAP16-1A8MUX0 517 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 KRTAP9-6A8MVA2 160 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 NDUFS8O00217 210 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 PLPP1O14494 284 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 SLC9A3R1O14745 358 aaPredicted RBP1.72□□□□□ -2.13
GABPB1-209ENST00000559100 NVLO15381 856 aaKnown RBP1.72□□□□□ -2.13
GABPB1-209ENST00000559100 SPOPO43791 374 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 DPM1O60762 260 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 CRLF1O75462 422 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 TNFSF13O75888 250 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 MMP23AO75900 390 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 BBOX1O75936 387 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 SCELO95171 688 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 FARS2O95363 451 aaKnown RBP1.72□□□□□ -2.13
GABPB1-209ENST00000559100 LSM8O95777 96 aaKnown RBP1.72□□□□□ -2.13
GABPB1-209ENST00000559100 IGHV3-48P01763 117 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 IGHV3-23P01764 117 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 HLA-HP01893 362 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 RHOXF2BP0C7M4 288 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 GKN3PP0CG01 181 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 ICAM2P13598 275 aa1.72□□□□□ -2.13
GABPB1-209ENST00000559100 PMCHP20382 165 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms