RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 CDRT15Q96T59 188 aa10.44□□□□□ -0.74
TPM1-216ENST00000558910 FOXB1Q99853 325 aa10.44□□□□□ -0.74
TPM1-216ENST00000558910 OR51B6Q9H340 312 aa10.44□□□□□ -0.74
TPM1-216ENST00000558910 RNF121Q9H920 327 aa10.44□□□□□ -0.74
TPM1-216ENST00000558910 INIPQ9NRY2 104 aa10.44□□□□□ -0.74
TPM1-216ENST00000558910 TAGLN3Q9UI15 199 aa10.44□□□□□ -0.74
TPM1-216ENST00000558910 FZR1Q9UM11 496 aa10.44□□□□□ -0.74
TPM1-216ENST00000558910 PLCE1Q9P212 2302 aa10.43□□□□□ -0.74
TPM1-216ENST00000558910 LOC102725191A0A1B0GVB3 256 aa10.43□□□□□ -0.74
TPM1-216ENST00000558910 EFCAB9A8MZ26 197 aa10.43□□□□□ -0.74
TPM1-216ENST00000558910 RPL36A-HNRNPH2H7BZ11 118 aa10.43□□□□□ -0.74
TPM1-216ENST00000558910 H7C1C5 153 aa10.43□□□□□ -0.74
TPM1-216ENST00000558910 FFAR1O14842 300 aa10.43□□□□□ -0.74
TPM1-216ENST00000558910 SLC2A10O95528 541 aa10.43□□□□□ -0.74
TPM1-216ENST00000558910 PRDX6P30041 224 aa10.43□□□□□ -0.74
TPM1-216ENST00000558910 CDAP32320 146 aa10.43□□□□□ -0.74
TPM1-216ENST00000558910 RBM34P42696 430 aaKnown RBP10.43□□□□□ -0.74
TPM1-216ENST00000558910 GIPRP48546 466 aa10.43□□□□□ -0.74
TPM1-216ENST00000558910 NUDT6P53370 316 aa10.43□□□□□ -0.74
TPM1-216ENST00000558910 LCN6P62502 163 aa10.43□□□□□ -0.74
TPM1-216ENST00000558910 FMODQ06828 376 aa10.43□□□□□ -0.74
TPM1-216ENST00000558910 CD47Q08722 323 aa10.43□□□□□ -0.74
TPM1-216ENST00000558910 RAB39AQ14964 217 aa10.43□□□□□ -0.74
TPM1-216ENST00000558910 TRAM2Q15035 370 aa10.43□□□□□ -0.74
TPM1-216ENST00000558910 RAB35Q15286 201 aa10.43□□□□□ -0.74
TPM1-216ENST00000558910 ALG10Q5BKT4 473 aa10.43□□□□□ -0.74
TPM1-216ENST00000558910 NHLRC1Q6VVB1 395 aa10.43□□□□□ -0.74
TPM1-216ENST00000558910 HACD2Q6Y1H2 254 aa10.43□□□□□ -0.74
TPM1-216ENST00000558910 RRM2BQ7LG56 351 aa10.43□□□□□ -0.74
TPM1-216ENST00000558910 PIGWQ7Z7B1 504 aa10.43□□□□□ -0.74
TPM1-216ENST00000558910 CYP4Z1Q86W10 505 aa10.43□□□□□ -0.74
TPM1-216ENST00000558910 DEFB107AQ8IZN7 70 aa10.43□□□□□ -0.74
TPM1-216ENST00000558910 LRRC18Q8N456 261 aa10.43□□□□□ -0.74
TPM1-216ENST00000558910 CLDN22Q8N7P3 220 aa10.43□□□□□ -0.74
TPM1-216ENST00000558910 OR6X1Q8NH79 312 aa10.43□□□□□ -0.74
TPM1-216ENST00000558910 IGFBPL1Q8WX77 278 aa10.43□□□□□ -0.74
TPM1-216ENST00000558910 TMEM54Q969K7 222 aa10.43□□□□□ -0.74
TPM1-216ENST00000558910 FAM46AQ96IP4 442 aaKnown RBP10.43□□□□□ -0.74
TPM1-216ENST00000558910 FOXN4Q96NZ1 517 aa10.43□□□□□ -0.74
TPM1-216ENST00000558910 TNFRSF13CQ96RJ3 184 aa10.43□□□□□ -0.74
TPM1-216ENST00000558910 VRK1Q99986 396 aaPredicted RBP10.43□□□□□ -0.74
TPM1-216ENST00000558910 ZNF426Q9BUY5 554 aa10.43□□□□□ -0.74
TPM1-216ENST00000558910 SLC19A3Q9BZV2 496 aa10.43□□□□□ -0.74
TPM1-216ENST00000558910 DLL4Q9NR61 685 aa10.43□□□□□ -0.74
TPM1-216ENST00000558910 CBLN4Q9NTU7 201 aa10.43□□□□□ -0.74
TPM1-216ENST00000558910 ZNF701Q9NV72 531 aaPredicted RBP10.43□□□□□ -0.74
TPM1-216ENST00000558910 RPS6KA6Q9UK32 745 aa10.43□□□□□ -0.74
TPM1-216ENST00000558910 FAM32AQ9Y421 112 aaKnown RBP10.43□□□□□ -0.74
TPM1-216ENST00000558910 NF1P21359 2839 aa10.43□□□□□ -0.74
TPM1-216ENST00000558910 NIPBLQ6KC79 2804 aaeCLIP10.43□□□□□ -0.74
TPM1-216ENST00000558910 ARPC4-TTLL3A0A0A6YYG9 625 aa10.42□□□□□ -0.74
TPM1-216ENST00000558910 OVOL3O00110 214 aa10.42□□□□□ -0.74
TPM1-216ENST00000558910 DYNC1I1O14576 645 aa10.42□□□□□ -0.74
TPM1-216ENST00000558910 DHHO43323 396 aa10.42□□□□□ -0.74
TPM1-216ENST00000558910 FZD7O75084 574 aa10.42□□□□□ -0.74
TPM1-216ENST00000558910 TRMUO75648 421 aaKnown RBP10.42□□□□□ -0.74
TPM1-216ENST00000558910 DCTN3O75935 186 aa10.42□□□□□ -0.74
TPM1-216ENST00000558910 RAB36O95755 333 aa10.42□□□□□ -0.74
TPM1-216ENST00000558910 LY6G6DO95868 133 aa10.42□□□□□ -0.74
TPM1-216ENST00000558910 IGHG1P01857 330 aa10.42□□□□□ -0.74
TPM1-216ENST00000558910 CCL2P13500 99 aa10.42□□□□□ -0.74
TPM1-216ENST00000558910 CBR1P16152 277 aa10.42□□□□□ -0.74
TPM1-216ENST00000558910 APOBEC3AP31941 199 aaPredicted RBP10.42□□□□□ -0.74
TPM1-216ENST00000558910 RPL4P36578 427 aaKnown RBP10.42□□□□□ -0.74
TPM1-216ENST00000558910 CTXN1P60606 82 aa10.42□□□□□ -0.74
TPM1-216ENST00000558910 RAB1AP62820 205 aa10.42□□□□□ -0.74
TPM1-216ENST00000558910 ZP4Q12836 540 aa10.42□□□□□ -0.74
TPM1-216ENST00000558910 SGCAQ16586 387 aa10.42□□□□□ -0.74
TPM1-216ENST00000558910 GSG1Q2KHT4 349 aa10.42□□□□□ -0.74
TPM1-216ENST00000558910 LRFN4Q6PJG9 635 aa10.42□□□□□ -0.74
TPM1-216ENST00000558910 CYP2R1Q6VVX0 501 aa10.42□□□□□ -0.74
TPM1-216ENST00000558910 SSX8Q7RTT4 187 aa10.42□□□□□ -0.74
TPM1-216ENST00000558910 SKA3Q8IX90 412 aa10.42□□□□□ -0.74
TPM1-216ENST00000558910 ANKS4BQ8N8V4 417 aa10.42□□□□□ -0.74
TPM1-216ENST00000558910 ICA1LQ8NDH6 482 aa10.42□□□□□ -0.74
TPM1-216ENST00000558910 OR4K5Q8NGD3 323 aa10.42□□□□□ -0.74
TPM1-216ENST00000558910 ASB10Q8WXI3 467 aa10.42□□□□□ -0.74
TPM1-216ENST00000558910 SLC25A44Q96H78 314 aaPredicted RBP10.42□□□□□ -0.74
TPM1-216ENST00000558910 ADAD1Q96M93 576 aaKnown RBP10.42□□□□□ -0.74
TPM1-216ENST00000558910 BDH2Q9BUT1 245 aa10.42□□□□□ -0.74
TPM1-216ENST00000558910 POLR2J2Q9GZM3 115 aaKnown RBP10.42□□□□□ -0.74
TPM1-216ENST00000558910 POLR2J3Q9H1A7 115 aaKnown RBP10.42□□□□□ -0.74
TPM1-216ENST00000558910 RERGLQ9H628 205 aa10.42□□□□□ -0.74
TPM1-216ENST00000558910 OBP2BQ9NPH6 170 aa10.42□□□□□ -0.74
TPM1-216ENST00000558910 MAN2C1Q9NTJ4 1040 aa10.42□□□□□ -0.74
TPM1-216ENST00000558910 ABCD2Q9UBJ2 740 aa10.42□□□□□ -0.74
TPM1-216ENST00000558910 IL20RAQ9UHF4 553 aa10.42□□□□□ -0.74
TPM1-216ENST00000558910 ZNF346Q9UL40 294 aaKnown RBP10.42□□□□□ -0.74
TPM1-216ENST00000558910 ZANQ9Y493 2812 aa10.41□□□□□ -0.74
TPM1-216ENST00000558910 A0A087WUU8 490 aa10.41□□□□□ -0.74
TPM1-216ENST00000558910 IGHV2OR16-5A0A0B4J2B6 119 aa10.41□□□□□ -0.74
TPM1-216ENST00000558910 LOC100996750A0A140TA64 210 aa10.41□□□□□ -0.74
TPM1-216ENST00000558910 NDUFAB1O14561 156 aa10.41□□□□□ -0.74
TPM1-216ENST00000558910 OR4A8P0C604 315 aa10.41□□□□□ -0.74
TPM1-216ENST00000558910 PGA4P0DJD7 388 aa10.41□□□□□ -0.74
TPM1-216ENST00000558910 PGA3P0DJD8 388 aa10.41□□□□□ -0.74
TPM1-216ENST00000558910 ACADSP16219 412 aa10.41□□□□□ -0.74
TPM1-216ENST00000558910 CCNOP22674 350 aa10.41□□□□□ -0.74
TPM1-216ENST00000558910 PCSK6P29122 969 aa10.41□□□□□ -0.74
TPM1-216ENST00000558910 THBS4P35443 961 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms