RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 CDK20Q8IZL9 346 aa13.71□□□□□ -0.21
DDX54-205ENST00000548786 FGFBP3Q8TAT2 258 aa13.71□□□□□ -0.21
DDX54-205ENST00000548786 LIPHQ8WWY8 451 aa13.71□□□□□ -0.21
DDX54-205ENST00000548786 NSMAFQ92636 917 aa13.71□□□□□ -0.21
DDX54-205ENST00000548786 MCHR2Q969V1 340 aa13.71□□□□□ -0.21
DDX54-205ENST00000548786 FBXO17Q96EF6 278 aa13.71□□□□□ -0.21
DDX54-205ENST00000548786 TRMT61AQ96FX7 289 aaKnown RBP13.71□□□□□ -0.21
DDX54-205ENST00000548786 PYURFQ96I23 114 aa13.71□□□□□ -0.21
DDX54-205ENST00000548786 KATNB1Q9BVA0 655 aa13.71□□□□□ -0.21
DDX54-205ENST00000548786 DLL4Q9NR61 685 aa13.71□□□□□ -0.21
DDX54-205ENST00000548786 CBLN4Q9NTU7 201 aa13.71□□□□□ -0.21
DDX54-205ENST00000548786 FAM53CQ9NYF3 392 aa13.71□□□□□ -0.21
DDX54-205ENST00000548786 ZNF224Q9NZL3 707 aa13.71□□□□□ -0.21
DDX54-205ENST00000548786 CRNNQ9UBG3 495 aaPredicted RBP13.71□□□□□ -0.21
DDX54-205ENST00000548786 HIF3AQ9Y2N7 669 aa13.71□□□□□ -0.21
DDX54-205ENST00000548786 NF1P21359 2839 aa13.7□□□□□ -0.22
DDX54-205ENST00000548786 H7C1C5 153 aa13.7□□□□□ -0.22
DDX54-205ENST00000548786 IGKV3-15P01624 115 aa13.7□□□□□ -0.22
DDX54-205ENST00000548786 TSPAN19P0C672 248 aa13.7□□□□□ -0.22
DDX54-205ENST00000548786 HOXB1P14653 301 aaPredicted RBP13.7□□□□□ -0.22
DDX54-205ENST00000548786 RHCEP18577 417 aa13.7□□□□□ -0.22
DDX54-205ENST00000548786 ATP6V1B2P21281 511 aa13.7□□□□□ -0.22
DDX54-205ENST00000548786 CDAP32320 146 aa13.7□□□□□ -0.22
DDX54-205ENST00000548786 ARR3P36575 388 aa13.7□□□□□ -0.22
DDX54-205ENST00000548786 RPL4P36578 427 aaKnown RBP13.7□□□□□ -0.22
DDX54-205ENST00000548786 ACVR1BP36896 505 aa13.7□□□□□ -0.22
DDX54-205ENST00000548786 LCN6P62502 163 aa13.7□□□□□ -0.22
DDX54-205ENST00000548786 SPIBQ01892 262 aa13.7□□□□□ -0.22
DDX54-205ENST00000548786 SEC23BQ15437 767 aa13.7□□□□□ -0.22
DDX54-205ENST00000548786 ARMC4Q5T2S8 1044 aa13.7□□□□□ -0.22
DDX54-205ENST00000548786 Q71RC1 249 aaPredicted RBP13.7□□□□□ -0.22
DDX54-205ENST00000548786 SKA3Q8IX90 412 aa13.7□□□□□ -0.22
DDX54-205ENST00000548786 SLC22A24Q8N4F4 322 aa13.7□□□□□ -0.22
DDX54-205ENST00000548786 OR4K5Q8NGD3 323 aa13.7□□□□□ -0.22
DDX54-205ENST00000548786 HDAC2Q92769 488 aaKnown RBP13.7□□□□□ -0.22
DDX54-205ENST00000548786 TSPAN32Q96QS1 320 aa13.7□□□□□ -0.22
DDX54-205ENST00000548786 TXNIPQ9H3M7 391 aa13.7□□□□□ -0.22
DDX54-205ENST00000548786 TMEM38BQ9NVV0 291 aa13.7□□□□□ -0.22
DDX54-205ENST00000548786 B3GNT2Q9NY97 397 aa13.7□□□□□ -0.22
DDX54-205ENST00000548786 IGHV2OR16-5A0A0B4J2B6 119 aa13.69□□□□□ -0.22
DDX54-205ENST00000548786 RAB36O95755 333 aa13.69□□□□□ -0.22
DDX54-205ENST00000548786 T-ENOLP0DO92 83 aa13.69□□□□□ -0.22
DDX54-205ENST00000548786 PAX1P15863 534 aa13.69□□□□□ -0.22
DDX54-205ENST00000548786 APOBEC3AP31941 199 aaPredicted RBP13.69□□□□□ -0.22
DDX54-205ENST00000548786 SLC9A3P48764 834 aa13.69□□□□□ -0.22
DDX54-205ENST00000548786 RAB1AP62820 205 aa13.69□□□□□ -0.22
DDX54-205ENST00000548786 ERVK-25P63136 954 aa13.69□□□□□ -0.22
DDX54-205ENST00000548786 FHL1Q13642 323 aa13.69□□□□□ -0.22
DDX54-205ENST00000548786 FXNQ16595 210 aa13.69□□□□□ -0.22
DDX54-205ENST00000548786 C1QTNF12Q5T7M4 302 aa13.69□□□□□ -0.22
DDX54-205ENST00000548786 C11orf71Q6IPW1 123 aa13.69□□□□□ -0.22
DDX54-205ENST00000548786 KRT80Q6KB66 452 aa13.69□□□□□ -0.22
DDX54-205ENST00000548786 ZNF544Q6NX49 715 aa13.69□□□□□ -0.22
DDX54-205ENST00000548786 HDDC2Q7Z4H3 204 aa13.69□□□□□ -0.22
DDX54-205ENST00000548786 CCDC36Q8IYA8 594 aa13.69□□□□□ -0.22
DDX54-205ENST00000548786 RNF113BQ8IZP6 322 aaKnown RBP13.69□□□□□ -0.22
DDX54-205ENST00000548786 LRRC18Q8N456 261 aa13.69□□□□□ -0.22
DDX54-205ENST00000548786 NANOS1Q8WY41 292 aaKnown RBP13.69□□□□□ -0.22
DDX54-205ENST00000548786 MCUR1Q96AQ8 359 aa13.69□□□□□ -0.22
DDX54-205ENST00000548786 C18orf12Q96KH6 178 aa13.69□□□□□ -0.22
DDX54-205ENST00000548786 SEPHS2Q99611 448 aa13.69□□□□□ -0.22
DDX54-205ENST00000548786 MRPL13Q9BYD1 178 aaKnown RBP13.69□□□□□ -0.22
DDX54-205ENST00000548786 CA10Q9NS85 328 aa13.69□□□□□ -0.22
DDX54-205ENST00000548786 IL20RAQ9UHF4 553 aa13.69□□□□□ -0.22
DDX54-205ENST00000548786 ZNF346Q9UL40 294 aaKnown RBP13.69□□□□□ -0.22
DDX54-205ENST00000548786 ADAM18Q9Y3Q7 739 aa13.69□□□□□ -0.22
DDX54-205ENST00000548786 ZANQ9Y493 2812 aa13.69□□□□□ -0.22
DDX54-205ENST00000548786 IGKV1D-43A0A0B4J1Z2 117 aa13.68□□□□□ -0.22
DDX54-205ENST00000548786 A0A1W2PRQ8 180 aa13.68□□□□□ -0.22
DDX54-205ENST00000548786 TMCC2O75069 709 aa13.68□□□□□ -0.22
DDX54-205ENST00000548786 SEMG1P04279 462 aa13.68□□□□□ -0.22
DDX54-205ENST00000548786 FABP3P05413 133 aa13.68□□□□□ -0.22
DDX54-205ENST00000548786 OR8G3PP0DMU2 310 aa13.68□□□□□ -0.22
DDX54-205ENST00000548786 ZNF26P17031 533 aaPredicted RBP13.68□□□□□ -0.22
DDX54-205ENST00000548786 CALB2P22676 271 aa13.68□□□□□ -0.22
DDX54-205ENST00000548786 ZNF84P51523 738 aa13.68□□□□□ -0.22
DDX54-205ENST00000548786 RPL27P61353 136 aaKnown RBP13.68□□□□□ -0.22
DDX54-205ENST00000548786 HGFACQ04756 655 aa13.68□□□□□ -0.22
DDX54-205ENST00000548786 DGCR6Q14129 220 aa13.68□□□□□ -0.22
DDX54-205ENST00000548786 RAB39AQ14964 217 aa13.68□□□□□ -0.22
DDX54-205ENST00000548786 CLEC12BQ2HXU8 276 aa13.68□□□□□ -0.22
DDX54-205ENST00000548786 PRSS57Q6UWY2 283 aa13.68□□□□□ -0.22
DDX54-205ENST00000548786 ZNF627Q7L945 461 aa13.68□□□□□ -0.22
DDX54-205ENST00000548786 PIWIL3Q7Z3Z3 882 aaKnown RBP13.68□□□□□ -0.22
DDX54-205ENST00000548786 LRRC75AQ8NAA5 344 aa13.68□□□□□ -0.22
DDX54-205ENST00000548786 BCAS4Q8TDM0 211 aa13.68□□□□□ -0.22
DDX54-205ENST00000548786 CCDC124Q96CT7 223 aaKnown RBP13.68□□□□□ -0.22
DDX54-205ENST00000548786 CLPTM1LQ96KA5 538 aa13.68□□□□□ -0.22
DDX54-205ENST00000548786 ANKRD19PQ9H560 264 aa13.68□□□□□ -0.22
DDX54-205ENST00000548786 RNF121Q9H920 327 aa13.68□□□□□ -0.22
DDX54-205ENST00000548786 TMEM5Q9Y2B1 443 aa13.68□□□□□ -0.22
DDX54-205ENST00000548786 SSX4O60224 188 aa13.67□□□□□ -0.22
DDX54-205ENST00000548786 UBL3O95164 117 aa13.67□□□□□ -0.22
DDX54-205ENST00000548786 GADD45GO95257 159 aa13.67□□□□□ -0.22
DDX54-205ENST00000548786 FARS2O95363 451 aaKnown RBP13.67□□□□□ -0.22
DDX54-205ENST00000548786 INHBBP09529 407 aa13.67□□□□□ -0.22
DDX54-205ENST00000548786 OR4A8P0C604 315 aa13.67□□□□□ -0.22
DDX54-205ENST00000548786 ITGA2P17301 1181 aa13.67□□□□□ -0.22
DDX54-205ENST00000548786 THBS4P35443 961 aa13.67□□□□□ -0.22
DDX54-205ENST00000548786 SNTB2Q13425 540 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms