RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 CLEC4MQ9H2X3 399 aaPredicted RBP10.49□□□□□ -0.73
SSBP3-214ENST00000533209 NTN4Q9HB63 628 aa10.49□□□□□ -0.73
SSBP3-214ENST00000533209 ARMC1Q9NVT9 282 aa10.49□□□□□ -0.73
SSBP3-214ENST00000533209 POFUT2Q9Y2G5 429 aa10.49□□□□□ -0.73
SSBP3-214ENST00000533209 AMDHD2Q9Y303 409 aa10.49□□□□□ -0.73
SSBP3-214ENST00000533209 AP4S1Q9Y587 144 aa10.49□□□□□ -0.73
SSBP3-214ENST00000533209 IER3IP1Q9Y5U9 82 aa10.49□□□□□ -0.73
SSBP3-214ENST00000533209 CACNA1DQ01668 2161 aa10.49□□□□□ -0.73
SSBP3-214ENST00000533209 ARPC4-TTLL3A0A0A6YYG9 625 aa10.48□□□□□ -0.73
SSBP3-214ENST00000533209 IGKV1D-43A0A0B4J1Z2 117 aa10.48□□□□□ -0.73
SSBP3-214ENST00000533209 TEX13CA0A0J9YWL9 993 aa10.48□□□□□ -0.73
SSBP3-214ENST00000533209 ARRDC5A6NEK1 342 aa10.48□□□□□ -0.73
SSBP3-214ENST00000533209 DPRXA6NFQ7 191 aa10.48□□□□□ -0.73
SSBP3-214ENST00000533209 TXNDC12O95881 172 aa10.48□□□□□ -0.73
SSBP3-214ENST00000533209 APEHP13798 732 aaKnown RBP10.48□□□□□ -0.73
SSBP3-214ENST00000533209 HOXB1P14653 301 aaPredicted RBP10.48□□□□□ -0.73
SSBP3-214ENST00000533209 SDHAP31040 664 aa10.48□□□□□ -0.73
SSBP3-214ENST00000533209 HOXC12P31275 282 aa10.48□□□□□ -0.73
SSBP3-214ENST00000533209 ACTR3P61158 418 aa10.48□□□□□ -0.73
SSBP3-214ENST00000533209 FMODQ06828 376 aa10.48□□□□□ -0.73
SSBP3-214ENST00000533209 KPNB1Q14974 876 aaKnown RBP10.48□□□□□ -0.73
SSBP3-214ENST00000533209 NCMAPQ5T1S8 102 aa10.48□□□□□ -0.73
SSBP3-214ENST00000533209 C10orf128Q5T292 105 aa10.48□□□□□ -0.73
SSBP3-214ENST00000533209 C1QTNF12Q5T7M4 302 aa10.48□□□□□ -0.73
SSBP3-214ENST00000533209 FBXW10Q5XX13 1052 aa10.48□□□□□ -0.73
SSBP3-214ENST00000533209 GPR139Q6DWJ6 353 aa10.48□□□□□ -0.73
SSBP3-214ENST00000533209 KLHL24Q6TFL4 600 aa10.48□□□□□ -0.73
SSBP3-214ENST00000533209 CD300LDQ6UXZ3 194 aa10.48□□□□□ -0.73
SSBP3-214ENST00000533209 ZNF813Q6ZN06 617 aa10.48□□□□□ -0.73
SSBP3-214ENST00000533209 RASSF6Q6ZTQ3 369 aa10.48□□□□□ -0.73
SSBP3-214ENST00000533209 CDC20BQ86Y33 519 aa10.48□□□□□ -0.73
SSBP3-214ENST00000533209 HS3ST5Q8IZT8 346 aa10.48□□□□□ -0.73
SSBP3-214ENST00000533209 CLDN22Q8N7P3 220 aa10.48□□□□□ -0.73
SSBP3-214ENST00000533209 GTPBP3Q969Y2 492 aaKnown RBP10.48□□□□□ -0.73
SSBP3-214ENST00000533209 RASD2Q96D21 266 aa10.48□□□□□ -0.73
SSBP3-214ENST00000533209 LURAP1Q96LR2 239 aa10.48□□□□□ -0.73
SSBP3-214ENST00000533209 SAMD8Q96LT4 415 aa10.48□□□□□ -0.73
SSBP3-214ENST00000533209 ZNF570Q96NI8 536 aa10.48□□□□□ -0.73
SSBP3-214ENST00000533209 FEVQ99581 238 aa10.48□□□□□ -0.73
SSBP3-214ENST00000533209 TMEM204Q9BSN7 226 aa10.48□□□□□ -0.73
SSBP3-214ENST00000533209 C1QTNF6Q9BXI9 259 aa10.48□□□□□ -0.73
SSBP3-214ENST00000533209 EGLN3Q9H6Z9 239 aa10.48□□□□□ -0.73
SSBP3-214ENST00000533209 NGBQ9NPG2 151 aa10.48□□□□□ -0.73
SSBP3-214ENST00000533209 OBP2BQ9NPH6 170 aa10.48□□□□□ -0.73
SSBP3-214ENST00000533209 GRHPRQ9UBQ7 328 aa10.48□□□□□ -0.73
SSBP3-214ENST00000533209 MGAT4BQ9UQ53 548 aa10.48□□□□□ -0.73
SSBP3-214ENST00000533209 CDH10Q9Y6N8 788 aa10.48□□□□□ -0.73
SSBP3-214ENST00000533209 SPG11Q96JI7 2443 aa10.48□□□□□ -0.73
SSBP3-214ENST00000533209 ZNF503-AS2A6NEH8 195 aa10.47□□□□□ -0.73
SSBP3-214ENST00000533209 H7C1C5 153 aa10.47□□□□□ -0.73
SSBP3-214ENST00000533209 ARHGEF9O43307 516 aa10.47□□□□□ -0.73
SSBP3-214ENST00000533209 DEAF1O75398 565 aaPredicted RBP10.47□□□□□ -0.73
SSBP3-214ENST00000533209 E2F6O75461 281 aa10.47□□□□□ -0.73
SSBP3-214ENST00000533209 SLC2A10O95528 541 aa10.47□□□□□ -0.73
SSBP3-214ENST00000533209 PPP1R3DO95685 299 aa10.47□□□□□ -0.73
SSBP3-214ENST00000533209 WNT11O96014 354 aa10.47□□□□□ -0.73
SSBP3-214ENST00000533209 TP53P04637 393 aaPredicted RBP10.47□□□□□ -0.73
SSBP3-214ENST00000533209 B4GALT1P15291 398 aa10.47□□□□□ -0.73
SSBP3-214ENST00000533209 PRKACGP22612 351 aa10.47□□□□□ -0.73
SSBP3-214ENST00000533209 SLC6A6P31641 620 aa10.47□□□□□ -0.73
SSBP3-214ENST00000533209 ZNF83P51522 516 aa10.47□□□□□ -0.73
SSBP3-214ENST00000533209 RPS6KA3P51812 740 aa10.47□□□□□ -0.73
SSBP3-214ENST00000533209 NR1H2P55055 460 aa10.47□□□□□ -0.73
SSBP3-214ENST00000533209 LCN6P62502 163 aa10.47□□□□□ -0.73
SSBP3-214ENST00000533209 TUBA1BP68363 451 aa10.47□□□□□ -0.73
SSBP3-214ENST00000533209 TUBA4AP68366 448 aa10.47□□□□□ -0.73
SSBP3-214ENST00000533209 GABPB1Q06547 395 aaPredicted RBP10.47□□□□□ -0.73
SSBP3-214ENST00000533209 CD47Q08722 323 aa10.47□□□□□ -0.73
SSBP3-214ENST00000533209 KRR1Q13601 381 aaKnown RBP10.47□□□□□ -0.73
SSBP3-214ENST00000533209 ATP6AP1Q15904 470 aa10.47□□□□□ -0.73
SSBP3-214ENST00000533209 SLC25A47Q6Q0C1 308 aa10.47□□□□□ -0.73
SSBP3-214ENST00000533209 TUBA1AQ71U36 451 aa10.47□□□□□ -0.73
SSBP3-214ENST00000533209 OR8D4Q8NGM9 314 aa10.47□□□□□ -0.73
SSBP3-214ENST00000533209 FNDC8Q8TC99 324 aa10.47□□□□□ -0.73
SSBP3-214ENST00000533209 ERMAPQ96PL5 475 aaPredicted RBP10.47□□□□□ -0.73
SSBP3-214ENST00000533209 NIPSNAP1Q9BPW8 284 aa10.47□□□□□ -0.73
SSBP3-214ENST00000533209 PLA2G12AQ9BZM1 189 aa10.47□□□□□ -0.73
SSBP3-214ENST00000533209 PLEKHF2Q9H8W4 249 aa10.47□□□□□ -0.73
SSBP3-214ENST00000533209 SMURF2Q9HAU4 748 aa10.47□□□□□ -0.73
SSBP3-214ENST00000533209 TMEM38BQ9NVV0 291 aa10.47□□□□□ -0.73
SSBP3-214ENST00000533209 IL20Q9NYY1 176 aa10.47□□□□□ -0.73
SSBP3-214ENST00000533209 PDP1Q9P0J1 537 aaPredicted RBP10.47□□□□□ -0.73
SSBP3-214ENST00000533209 UGT2A1Q9Y4X1 527 aa10.47□□□□□ -0.73
SSBP3-214ENST00000533209 MAGED1Q9Y5V3 778 aaPredicted RBP10.47□□□□□ -0.73
SSBP3-214ENST00000533209 MAST4O15021 2626 aa10.47□□□□□ -0.73
SSBP3-214ENST00000533209 TEX15Q9BXT5 2789 aa10.47□□□□□ -0.73
SSBP3-214ENST00000533209 PDZD2O15018 2839 aa10.46□□□□□ -0.73
SSBP3-214ENST00000533209 SLC22A23A1A5C7 686 aa10.46□□□□□ -0.73
SSBP3-214ENST00000533209 PRSS37A4D1T9 235 aa10.46□□□□□ -0.73
SSBP3-214ENST00000533209 SOCS2O14508 198 aa10.46□□□□□ -0.73
SSBP3-214ENST00000533209 XKRYO14609 159 aa10.46□□□□□ -0.73
SSBP3-214ENST00000533209 IMPA2O14732 288 aa10.46□□□□□ -0.73
SSBP3-214ENST00000533209 ARPC3O15145 178 aa10.46□□□□□ -0.73
SSBP3-214ENST00000533209 AHCYL1O43865 530 aa10.46□□□□□ -0.73
SSBP3-214ENST00000533209 PLAUP00749 431 aa10.46□□□□□ -0.73
SSBP3-214ENST00000533209 IGFBP1P08833 259 aaPredicted RBP10.46□□□□□ -0.73
SSBP3-214ENST00000533209 NR2C1P13056 603 aa10.46□□□□□ -0.73
SSBP3-214ENST00000533209 GSTM3P21266 225 aa10.46□□□□□ -0.73
SSBP3-214ENST00000533209 CDKN2AP42771 156 aaKnown RBP10.46□□□□□ -0.73
SSBP3-214ENST00000533209 UBE2NP61088 152 aaKnown RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms