RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 CD47Q08722 323 aa11.65□□□□□ -0.54
CCL28-202ENST00000489442 GSG1Q2KHT4 349 aa11.65□□□□□ -0.54
CCL28-202ENST00000489442 C3orf36Q3SXR2 165 aa11.65□□□□□ -0.54
CCL28-202ENST00000489442 ZBED5Q49AG3 693 aa11.65□□□□□ -0.54
CCL28-202ENST00000489442 ZNF544Q6NX49 715 aa11.65□□□□□ -0.54
CCL28-202ENST00000489442 LRFN4Q6PJG9 635 aa11.65□□□□□ -0.54
CCL28-202ENST00000489442 TMPRSS11FQ6ZWK6 438 aa11.65□□□□□ -0.54
CCL28-202ENST00000489442 TRPM8Q7Z2W7 1104 aa11.65□□□□□ -0.54
CCL28-202ENST00000489442 YTHDF3Q7Z739 585 aaKnown RBP11.65□□□□□ -0.54
CCL28-202ENST00000489442 IGFN1Q86VF2 1251 aa11.65□□□□□ -0.54
CCL28-202ENST00000489442 MUC15Q8N387 334 aa11.65□□□□□ -0.54
CCL28-202ENST00000489442 FAM169BQ8N8A8 192 aa11.65□□□□□ -0.54
CCL28-202ENST00000489442 NOXO1Q8NFA2 376 aa11.65□□□□□ -0.54
CCL28-202ENST00000489442 OR13C2Q8NGS9 318 aa11.65□□□□□ -0.54
CCL28-202ENST00000489442 MCHR2Q969V1 340 aa11.65□□□□□ -0.54
CCL28-202ENST00000489442 MS4A3Q96HJ5 214 aa11.65□□□□□ -0.54
CCL28-202ENST00000489442 FAM46AQ96IP4 442 aaKnown RBP11.65□□□□□ -0.54
CCL28-202ENST00000489442 ZNF347Q96SE7 839 aa11.65□□□□□ -0.54
CCL28-202ENST00000489442 SEPHS2Q99611 448 aa11.65□□□□□ -0.54
CCL28-202ENST00000489442 KATNB1Q9BVA0 655 aa11.65□□□□□ -0.54
CCL28-202ENST00000489442 ACTR3BQ9P1U1 418 aa11.65□□□□□ -0.54
CCL28-202ENST00000489442 CRNNQ9UBG3 495 aaPredicted RBP11.65□□□□□ -0.54
CCL28-202ENST00000489442 RTTNQ86VV8 2226 aa11.65□□□□□ -0.55
CCL28-202ENST00000489442 TRBV4-1A0A0J9YWV2 114 aa11.64□□□□□ -0.55
CCL28-202ENST00000489442 NPIPB13A6NJU9 1138 aa11.64□□□□□ -0.55
CCL28-202ENST00000489442 VSTM5A8MXK1 200 aa11.64□□□□□ -0.55
CCL28-202ENST00000489442 NPIPB4C9JG80 1138 aa11.64□□□□□ -0.55
CCL28-202ENST00000489442 PDE5AO76074 875 aa11.64□□□□□ -0.55
CCL28-202ENST00000489442 UBL3O95164 117 aa11.64□□□□□ -0.55
CCL28-202ENST00000489442 RAB36O95755 333 aa11.64□□□□□ -0.55
CCL28-202ENST00000489442 IGKV3-15P01624 115 aa11.64□□□□□ -0.55
CCL28-202ENST00000489442 T-ENOLP0DO92 83 aa11.64□□□□□ -0.55
CCL28-202ENST00000489442 BMP4P12644 408 aa11.64□□□□□ -0.55
CCL28-202ENST00000489442 APOBEC3AP31941 199 aaPredicted RBP11.64□□□□□ -0.55
CCL28-202ENST00000489442 PTDSS1P48651 473 aaKnown RBP11.64□□□□□ -0.55
CCL28-202ENST00000489442 RPL27P61353 136 aaKnown RBP11.64□□□□□ -0.55
CCL28-202ENST00000489442 RAB1AP62820 205 aa11.64□□□□□ -0.55
CCL28-202ENST00000489442 NAAAQ02083 359 aa11.64□□□□□ -0.55
CCL28-202ENST00000489442 CHRNB3Q05901 458 aa11.64□□□□□ -0.55
CCL28-202ENST00000489442 RUNX1T1Q06455 604 aa11.64□□□□□ -0.55
CCL28-202ENST00000489442 MTX3Q5HYI7 312 aa11.64□□□□□ -0.55
CCL28-202ENST00000489442 ARMC4Q5T2S8 1044 aa11.64□□□□□ -0.55
CCL28-202ENST00000489442 PRSS57Q6UWY2 283 aa11.64□□□□□ -0.55
CCL28-202ENST00000489442 B3GLCTQ6Y288 498 aa11.64□□□□□ -0.55
CCL28-202ENST00000489442 ZNF627Q7L945 461 aa11.64□□□□□ -0.55
CCL28-202ENST00000489442 DHFR2Q86XF0 187 aa11.64□□□□□ -0.55
CCL28-202ENST00000489442 ZDHHC21Q8IVQ6 265 aa11.64□□□□□ -0.55
CCL28-202ENST00000489442 SLC22A24Q8N4F4 322 aa11.64□□□□□ -0.55
CCL28-202ENST00000489442 IL17RDQ8NFM7 739 aa11.64□□□□□ -0.55
CCL28-202ENST00000489442 OR4K5Q8NGD3 323 aa11.64□□□□□ -0.55
CCL28-202ENST00000489442 IGFBPL1Q8WX77 278 aa11.64□□□□□ -0.55
CCL28-202ENST00000489442 RBP7Q96R05 134 aa11.64□□□□□ -0.55
CCL28-202ENST00000489442 TRAF4Q9BUZ4 470 aaPredicted RBP11.64□□□□□ -0.55
CCL28-202ENST00000489442 TMUB1Q9BVT8 246 aa11.64□□□□□ -0.55
CCL28-202ENST00000489442 MRPL13Q9BYD1 178 aaKnown RBP11.64□□□□□ -0.55
CCL28-202ENST00000489442 MUC13Q9H3R2 512 aa11.64□□□□□ -0.55
CCL28-202ENST00000489442 DENND2DQ9H6A0 471 aaPredicted RBP11.64□□□□□ -0.55
CCL28-202ENST00000489442 RNF121Q9H920 327 aa11.64□□□□□ -0.55
CCL28-202ENST00000489442 ZNF701Q9NV72 531 aaPredicted RBP11.64□□□□□ -0.55
CCL28-202ENST00000489442 GRHPRQ9UBQ7 328 aa11.64□□□□□ -0.55
CCL28-202ENST00000489442 ZNF346Q9UL40 294 aaKnown RBP11.64□□□□□ -0.55
CCL28-202ENST00000489442 TMCC3Q9ULS5 477 aa11.64□□□□□ -0.55
CCL28-202ENST00000489442 PRPF19Q9UMS4 504 aaKnown RBP11.64□□□□□ -0.55
CCL28-202ENST00000489442 ZNF469Q96JG9 3925 aaPredicted RBP11.64□□□□□ -0.55
CCL28-202ENST00000489442 ZNF503-AS2A6NEH8 195 aa11.63□□□□□ -0.55
CCL28-202ENST00000489442 A6NIZ1 184 aa11.63□□□□□ -0.55
CCL28-202ENST00000489442 CDC42EP2O14613 210 aa11.63□□□□□ -0.55
CCL28-202ENST00000489442 IGLV1-44P01699 117 aa11.63□□□□□ -0.55
CCL28-202ENST00000489442 CD8AP01732 235 aa11.63□□□□□ -0.55
CCL28-202ENST00000489442 CELA3BP08861 270 aa11.63□□□□□ -0.55
CCL28-202ENST00000489442 PAX1P15863 534 aa11.63□□□□□ -0.55
CCL28-202ENST00000489442 GUCA1AP43080 201 aaPredicted RBP11.63□□□□□ -0.55
CCL28-202ENST00000489442 GIPRP48546 466 aa11.63□□□□□ -0.55
CCL28-202ENST00000489442 RAP1BP61224 184 aa11.63□□□□□ -0.55
CCL28-202ENST00000489442 RAP1AP62834 184 aa11.63□□□□□ -0.55
CCL28-202ENST00000489442 ERVK-25P63136 954 aa11.63□□□□□ -0.55
CCL28-202ENST00000489442 TRIM25Q14258 630 aaKnown RBP11.63□□□□□ -0.55
CCL28-202ENST00000489442 HIST3H3Q16695 136 aa11.63□□□□□ -0.55
CCL28-202ENST00000489442 FAM205BPQ63HN1 556 aa11.63□□□□□ -0.55
CCL28-202ENST00000489442 VHLLQ6RSH7 139 aa11.63□□□□□ -0.55
CCL28-202ENST00000489442 SLC16A14Q7RTX9 510 aa11.63□□□□□ -0.55
CCL28-202ENST00000489442 DTX2Q86UW9 622 aa11.63□□□□□ -0.55
CCL28-202ENST00000489442 SKA3Q8IX90 412 aa11.63□□□□□ -0.55
CCL28-202ENST00000489442 OR4F15Q8NGB8 312 aa11.63□□□□□ -0.55
CCL28-202ENST00000489442 LRGUKQ96M69 825 aa11.63□□□□□ -0.55
CCL28-202ENST00000489442 SH3GL3Q99963 347 aa11.63□□□□□ -0.55
CCL28-202ENST00000489442 THTPAQ9BU02 230 aa11.63□□□□□ -0.55
CCL28-202ENST00000489442 GRIP2Q9C0E4 1043 aa11.63□□□□□ -0.55
CCL28-202ENST00000489442 C1orf21Q9H246 121 aa11.63□□□□□ -0.55
CCL28-202ENST00000489442 KCNN2Q9H2S1 579 aa11.63□□□□□ -0.55
CCL28-202ENST00000489442 IL1RAPQ9NPH3 570 aa11.63□□□□□ -0.55
CCL28-202ENST00000489442 CBLN4Q9NTU7 201 aa11.63□□□□□ -0.55
CCL28-202ENST00000489442 TMEM38BQ9NVV0 291 aa11.63□□□□□ -0.55
CCL28-202ENST00000489442 B3GNT2Q9NY97 397 aa11.63□□□□□ -0.55
CCL28-202ENST00000489442 TAS2R1Q9NYW7 299 aa11.63□□□□□ -0.55
CCL28-202ENST00000489442 METRNQ9UJH8 293 aa11.63□□□□□ -0.55
CCL28-202ENST00000489442 ARFGEF3Q5TH69 2177 aa11.63□□□□□ -0.55
CCL28-202ENST00000489442 TLN2Q9Y4G6 2542 aa11.63□□□□□ -0.55
CCL28-202ENST00000489442 UNC119BA6NIH7 251 aa11.62□□□□□ -0.55
CCL28-202ENST00000489442 OVOL3O00110 214 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms