RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 PRSS50Q9UI38 385 aa15.53■□□□□ 0.08
CHMP3-207ENST00000485465 RNF6Q9Y252 685 aa15.53■□□□□ 0.08
CHMP3-207ENST00000485465 GPR52Q9Y2T5 361 aa15.53■□□□□ 0.08
CHMP3-207ENST00000485465 POLEQ07864 2286 aa15.53■□□□□ 0.08
CHMP3-207ENST00000485465 CHD6Q8TD26 2715 aa15.53■□□□□ 0.08
CHMP3-207ENST00000485465 M0R3G1 203 aa15.52■□□□□ 0.08
CHMP3-207ENST00000485465 TLX2O43763 284 aaPredicted RBP15.52■□□□□ 0.08
CHMP3-207ENST00000485465 SMNDC1O75940 238 aaKnown RBP eCLIP15.52■□□□□ 0.08
CHMP3-207ENST00000485465 IGHV3-9P01782 118 aa15.52■□□□□ 0.08
CHMP3-207ENST00000485465 NR2C1P13056 603 aa15.52■□□□□ 0.08
CHMP3-207ENST00000485465 BMP5P22003 454 aa15.52■□□□□ 0.08
CHMP3-207ENST00000485465 FBXW9Q5XUX1 488 aa15.52■□□□□ 0.08
CHMP3-207ENST00000485465 LRFN4Q6PJG9 635 aa15.52■□□□□ 0.08
CHMP3-207ENST00000485465 USP51Q70EK9 711 aa15.52■□□□□ 0.08
CHMP3-207ENST00000485465 LIX1LQ8IVB5 337 aa15.52■□□□□ 0.08
CHMP3-207ENST00000485465 UBE2J2Q8N2K1 259 aa15.52■□□□□ 0.08
CHMP3-207ENST00000485465 ZNF610Q8N9Z0 462 aa15.52■□□□□ 0.08
CHMP3-207ENST00000485465 OR8J1Q8NGP2 316 aa15.52■□□□□ 0.08
CHMP3-207ENST00000485465 TMEM163Q8TC26 289 aa15.52■□□□□ 0.08
CHMP3-207ENST00000485465 TRUB1Q8WWH5 349 aaKnown RBP15.52■□□□□ 0.08
CHMP3-207ENST00000485465 MCHR2Q969V1 340 aa15.52■□□□□ 0.08
CHMP3-207ENST00000485465 MUS81Q96NY9 551 aa15.52■□□□□ 0.08
CHMP3-207ENST00000485465 IL4I1Q96RQ9 567 aa15.52■□□□□ 0.08
CHMP3-207ENST00000485465 OPN3Q9H1Y3 402 aaPredicted RBP15.52■□□□□ 0.08
CHMP3-207ENST00000485465 SYT4Q9H2B2 425 aa15.52■□□□□ 0.08
CHMP3-207ENST00000485465 FN3KQ9H479 309 aa15.52■□□□□ 0.08
CHMP3-207ENST00000485465 B3GAT2Q9NPZ5 323 aa15.52■□□□□ 0.08
CHMP3-207ENST00000485465 ZNF226Q9NYT6 803 aa15.52■□□□□ 0.08
CHMP3-207ENST00000485465 UPB1Q9UBR1 384 aa15.52■□□□□ 0.08
CHMP3-207ENST00000485465 ERRFI1Q9UJM3 462 aaPredicted RBP15.52■□□□□ 0.08
CHMP3-207ENST00000485465 RAB26Q9ULW5 256 aa15.52■□□□□ 0.08
CHMP3-207ENST00000485465 FAM183AA6NL82 134 aa15.51■□□□□ 0.07
CHMP3-207ENST00000485465 PRR23D1E9PI22 279 aaPredicted RBP15.51■□□□□ 0.07
CHMP3-207ENST00000485465 DVL2O14641 736 aa15.51■□□□□ 0.07
CHMP3-207ENST00000485465 KRT33AO76009 404 aa15.51■□□□□ 0.07
CHMP3-207ENST00000485465 QDPRP09417 244 aa15.51■□□□□ 0.07
CHMP3-207ENST00000485465 GNAO1P09471 354 aa15.51■□□□□ 0.07
CHMP3-207ENST00000485465 PRR23D2P0DMB1 279 aaPredicted RBP15.51■□□□□ 0.07
CHMP3-207ENST00000485465 PAICSP22234 425 aaKnown RBP15.51■□□□□ 0.07
CHMP3-207ENST00000485465 ZNF133P52736 654 aaPredicted RBP15.51■□□□□ 0.07
CHMP3-207ENST00000485465 SLC25A1P53007 311 aa15.51■□□□□ 0.07
CHMP3-207ENST00000485465 FMODQ06828 376 aa15.51■□□□□ 0.07
CHMP3-207ENST00000485465 PLBD1Q6P4A8 553 aa15.51■□□□□ 0.07
CHMP3-207ENST00000485465 SLC25A47Q6Q0C1 308 aa15.51■□□□□ 0.07
CHMP3-207ENST00000485465 LINGO2Q7L985 606 aa15.51■□□□□ 0.07
CHMP3-207ENST00000485465 CPOQ8IVL8 374 aa15.51■□□□□ 0.07
CHMP3-207ENST00000485465 ENTHD1Q8IYW4 607 aa15.51■□□□□ 0.07
CHMP3-207ENST00000485465 PTP4A1Q93096 173 aa15.51■□□□□ 0.07
CHMP3-207ENST00000485465 OTULINQ96BN8 352 aa15.51■□□□□ 0.07
CHMP3-207ENST00000485465 ULBP2Q9BZM5 246 aa15.51■□□□□ 0.07
CHMP3-207ENST00000485465 NMNAT2Q9BZQ4 307 aa15.51■□□□□ 0.07
CHMP3-207ENST00000485465 NUAK2Q9H093 628 aa15.51■□□□□ 0.07
CHMP3-207ENST00000485465 MED20Q9H944 212 aa15.51■□□□□ 0.07
CHMP3-207ENST00000485465 GPR35Q9HC97 309 aa15.51■□□□□ 0.07
CHMP3-207ENST00000485465 HINT3Q9NQE9 182 aaKnown RBP15.51■□□□□ 0.07
CHMP3-207ENST00000485465 RPRD1BQ9NQG5 326 aaKnown RBP15.51■□□□□ 0.07
CHMP3-207ENST00000485465 ASB6Q9NWX5 421 aa15.51■□□□□ 0.07
CHMP3-207ENST00000485465 COQ3Q9NZJ6 369 aa15.51■□□□□ 0.07
CHMP3-207ENST00000485465 SLC5A6Q9Y289 635 aa15.51■□□□□ 0.07
CHMP3-207ENST00000485465 FAM208BQ5VWN6 2430 aa15.51■□□□□ 0.07
CHMP3-207ENST00000485465 IGKV1D-43A0A0B4J1Z2 117 aa15.5■□□□□ 0.07
CHMP3-207ENST00000485465 MSTNO14793 375 aa15.5■□□□□ 0.07
CHMP3-207ENST00000485465 SLC16A7O60669 478 aa15.5■□□□□ 0.07
CHMP3-207ENST00000485465 CNOT4O95628 575 aaKnown RBP15.5■□□□□ 0.07
CHMP3-207ENST00000485465 CRABP1P29762 137 aa15.5■□□□□ 0.07
CHMP3-207ENST00000485465 CHRNB4P30926 498 aa15.5■□□□□ 0.07
CHMP3-207ENST00000485465 SNRPGP62308 76 aaKnown RBP15.5■□□□□ 0.07
CHMP3-207ENST00000485465 ROR2Q01974 943 aaKnown RBP15.5■□□□□ 0.07
CHMP3-207ENST00000485465 FAPQ12884 760 aa15.5■□□□□ 0.07
CHMP3-207ENST00000485465 CXXC5Q7LFL8 322 aaKnown RBP15.5■□□□□ 0.07
CHMP3-207ENST00000485465 C8orf59Q8N0T1 100 aaPredicted RBP15.5■□□□□ 0.07
CHMP3-207ENST00000485465 OR6V1Q8N148 313 aa15.5■□□□□ 0.07
CHMP3-207ENST00000485465 FAM26EQ8N5C1 309 aa15.5■□□□□ 0.07
CHMP3-207ENST00000485465 RELL2Q8NC24 303 aaPredicted RBP15.5■□□□□ 0.07
CHMP3-207ENST00000485465 SETD9Q8NE22 299 aa15.5■□□□□ 0.07
CHMP3-207ENST00000485465 OR9Q1Q8NGQ5 310 aa15.5■□□□□ 0.07
CHMP3-207ENST00000485465 RHOXF1Q8NHV9 184 aa15.5■□□□□ 0.07
CHMP3-207ENST00000485465 ASB5Q8WWX0 329 aa15.5■□□□□ 0.07
CHMP3-207ENST00000485465 TSSK2Q96PF2 358 aa15.5■□□□□ 0.07
CHMP3-207ENST00000485465 ALKBH3Q96Q83 286 aaPredicted RBP15.5■□□□□ 0.07
CHMP3-207ENST00000485465 HCAR1Q9BXC0 346 aa15.5■□□□□ 0.07
CHMP3-207ENST00000485465 CRLF2Q9HC73 371 aa15.5■□□□□ 0.07
CHMP3-207ENST00000485465 SRA1Q9HD15 236 aaKnown RBP15.5■□□□□ 0.07
CHMP3-207ENST00000485465 MALT1Q9UDY8 824 aa15.5■□□□□ 0.07
CHMP3-207ENST00000485465 B9D1Q9UPM9 204 aa15.5■□□□□ 0.07
CHMP3-207ENST00000485465 FKBP7Q9Y680 259 aa15.5■□□□□ 0.07
CHMP3-207ENST00000485465 ZNF587BE7ETH6 402 aa15.49■□□□□ 0.07
CHMP3-207ENST00000485465 RPL36A-HNRNPH2H7BZ11 118 aa15.49■□□□□ 0.07
CHMP3-207ENST00000485465 DCTN6O00399 190 aa15.49■□□□□ 0.07
CHMP3-207ENST00000485465 DHHO43323 396 aa15.49■□□□□ 0.07
CHMP3-207ENST00000485465 MPZL2O60487 215 aa15.49■□□□□ 0.07
CHMP3-207ENST00000485465 KHDRBS3O75525 346 aaKnown RBP15.49■□□□□ 0.07
CHMP3-207ENST00000485465 CTLA4P16410 223 aa15.49■□□□□ 0.07
CHMP3-207ENST00000485465 GABRB1P18505 474 aa15.49■□□□□ 0.07
CHMP3-207ENST00000485465 ISL1P61371 349 aa15.49■□□□□ 0.07
CHMP3-207ENST00000485465 IL5RAQ01344 420 aa15.49■□□□□ 0.07
CHMP3-207ENST00000485465 DBPQ10586 325 aaPredicted RBP15.49■□□□□ 0.07
CHMP3-207ENST00000485465 SLC25A30Q5SVS4 291 aa15.49■□□□□ 0.07
CHMP3-207ENST00000485465 C10orf128Q5T292 105 aa15.49■□□□□ 0.07
CHMP3-207ENST00000485465 AADACL4Q5VUY2 407 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms