RNA–Protein interactions for RNA: ENST00000474584.5

RPGR-206, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,268 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-206ENST00000474584 ZNF563Q8TA94 476 aa12.76□□□□□ -0.37
RPGR-206ENST00000474584 SCARB1Q8WTV0 552 aa12.76□□□□□ -0.37
RPGR-206ENST00000474584 TNFAIP8L1Q8WVP5 186 aa12.76□□□□□ -0.37
RPGR-206ENST00000474584 MCHR2Q969V1 340 aa12.76□□□□□ -0.37
RPGR-206ENST00000474584 LMF1Q96S06 567 aa12.76□□□□□ -0.37
RPGR-206ENST00000474584 PELOQ9BRX2 385 aaKnown RBP12.76□□□□□ -0.37
RPGR-206ENST00000474584 SYT4Q9H2B2 425 aa12.76□□□□□ -0.37
RPGR-206ENST00000474584 C12orf10Q9HB07 376 aa12.76□□□□□ -0.37
RPGR-206ENST00000474584 MED9Q9NWA0 146 aa12.76□□□□□ -0.37
RPGR-206ENST00000474584 H3BSH0 61 aa12.76□□□□□ -0.37
RPGR-206ENST00000474584 OIP5O43482 229 aa12.76□□□□□ -0.37
RPGR-206ENST00000474584 ZNF35P13682 527 aa12.76□□□□□ -0.37
RPGR-206ENST00000474584 CTSEP14091 401 aa12.76□□□□□ -0.37
RPGR-206ENST00000474584 PPP3CBP16298 524 aa12.76□□□□□ -0.37
RPGR-206ENST00000474584 CSRP1P21291 193 aaKnown RBP12.76□□□□□ -0.37
RPGR-206ENST00000474584 RPS27P42677 84 aaKnown RBP12.76□□□□□ -0.37
RPGR-206ENST00000474584 POU3F4P49335 361 aa12.76□□□□□ -0.37
RPGR-206ENST00000474584 HSD17B7P56937 341 aa12.76□□□□□ -0.37
RPGR-206ENST00000474584 H2BFSP57053 126 aa12.76□□□□□ -0.37
RPGR-206ENST00000474584 GMFBP60983 142 aa12.76□□□□□ -0.37
RPGR-206ENST00000474584 SLC51BQ86UW2 128 aa12.76□□□□□ -0.37
RPGR-206ENST00000474584 PARGQ86W56 976 aa12.76□□□□□ -0.37
RPGR-206ENST00000474584 PRSS35Q8N3Z0 413 aa12.76□□□□□ -0.37
RPGR-206ENST00000474584 OR2AK2Q8NG84 335 aa12.76□□□□□ -0.37
RPGR-206ENST00000474584 KTI12Q96EK9 354 aaPredicted RBP12.76□□□□□ -0.37
RPGR-206ENST00000474584 WBP1Q96G27 269 aa12.76□□□□□ -0.37
RPGR-206ENST00000474584 C4orf45Q96LM5 186 aa12.76□□□□□ -0.37
RPGR-206ENST00000474584 DCBLD2Q96PD2 775 aa12.76□□□□□ -0.37
RPGR-206ENST00000474584 OR1F2PQ96R84 312 aa12.76□□□□□ -0.37
RPGR-206ENST00000474584 ULBP3Q9BZM4 244 aa12.76□□□□□ -0.37
RPGR-206ENST00000474584 ARL6Q9H0F7 186 aa12.76□□□□□ -0.37
RPGR-206ENST00000474584 TMEM138Q9NPI0 162 aa12.76□□□□□ -0.37
RPGR-206ENST00000474584 PFDN2Q9UHV9 154 aa12.76□□□□□ -0.37
RPGR-206ENST00000474584 CACNA1CQ13936 2221 aa12.75□□□□□ -0.37
RPGR-206ENST00000474584 CACNA1IQ9P0X4 2223 aa12.75□□□□□ -0.37
RPGR-206ENST00000474584 FXYD6-FXYD2A0A087WZ82 144 aa12.75□□□□□ -0.37
RPGR-206ENST00000474584 MFSD2BA6NFX1 497 aa12.75□□□□□ -0.37
RPGR-206ENST00000474584 GOSR2O14653 212 aa12.75□□□□□ -0.37
RPGR-206ENST00000474584 CCKBRP32239 447 aa12.75□□□□□ -0.37
RPGR-206ENST00000474584 PTGS2P35354 604 aa12.75□□□□□ -0.37
RPGR-206ENST00000474584 RAB11BQ15907 218 aa12.75□□□□□ -0.37
RPGR-206ENST00000474584 C11orf88Q6PI97 169 aa12.75□□□□□ -0.37
RPGR-206ENST00000474584 FBXO46Q6PJ61 603 aaPredicted RBP12.75□□□□□ -0.37
RPGR-206ENST00000474584 ALKAL2Q6UX46 152 aa12.75□□□□□ -0.37
RPGR-206ENST00000474584 TMUB2Q71RG4 321 aa12.75□□□□□ -0.37
RPGR-206ENST00000474584 NUP54Q7Z3B4 507 aa12.75□□□□□ -0.37
RPGR-206ENST00000474584 NAXDQ8IW45 347 aa12.75□□□□□ -0.37
RPGR-206ENST00000474584 MMABQ96EY8 250 aaPredicted RBP12.75□□□□□ -0.37
RPGR-206ENST00000474584 WDR89Q96FK6 387 aaPredicted RBP12.75□□□□□ -0.37
RPGR-206ENST00000474584 TMEM106CQ9BVX2 250 aa12.75□□□□□ -0.37
RPGR-206ENST00000474584 FXYD6Q9H0Q3 95 aa12.75□□□□□ -0.37
RPGR-206ENST00000474584 PRAMEF26H0Y7S4 382 aa12.74□□□□□ -0.37
RPGR-206ENST00000474584 XKRYO14609 159 aa12.74□□□□□ -0.37
RPGR-206ENST00000474584 LINC01565O15544 149 aa12.74□□□□□ -0.37
RPGR-206ENST00000474584 SEMA4FO95754 770 aa12.74□□□□□ -0.37
RPGR-206ENST00000474584 NMBP08949 121 aa12.74□□□□□ -0.37
RPGR-206ENST00000474584 MST1P26927 711 aa12.74□□□□□ -0.37
RPGR-206ENST00000474584 TACR3P29371 465 aa12.74□□□□□ -0.37
RPGR-206ENST00000474584 PRSS3P35030 304 aa12.74□□□□□ -0.37
RPGR-206ENST00000474584 NUP62P37198 522 aaPredicted RBP12.74□□□□□ -0.37
RPGR-206ENST00000474584 OC90Q02509 493 aaPredicted RBP12.74□□□□□ -0.37
RPGR-206ENST00000474584 SSBP1Q04837 148 aaKnown RBP12.74□□□□□ -0.37
RPGR-206ENST00000474584 SERTAD2Q14140 314 aa12.74□□□□□ -0.37
RPGR-206ENST00000474584 CSRP2Q16527 193 aa12.74□□□□□ -0.37
RPGR-206ENST00000474584 WDR38Q5JTN6 314 aa12.74□□□□□ -0.37
RPGR-206ENST00000474584 SFRP5Q5T4F7 317 aa12.74□□□□□ -0.37
RPGR-206ENST00000474584 OR4D10Q8NGI6 311 aa12.74□□□□□ -0.37
RPGR-206ENST00000474584 OR51S1Q8NGJ8 323 aa12.74□□□□□ -0.37
RPGR-206ENST00000474584 OTOSQ8NHW6 89 aa12.74□□□□□ -0.37
RPGR-206ENST00000474584 COQ8AQ8NI60 647 aa12.74□□□□□ -0.37
RPGR-206ENST00000474584 ASB13Q8WXK3 278 aa12.74□□□□□ -0.37
RPGR-206ENST00000474584 REG4Q9BYZ8 158 aa12.74□□□□□ -0.37
RPGR-206ENST00000474584 TTYH1Q9H313 450 aaPredicted RBP12.74□□□□□ -0.37
RPGR-206ENST00000474584 KCNMB2Q9Y691 235 aa12.74□□□□□ -0.37
RPGR-206ENST00000474584 TRAV18A0A075B6X5 111 aa12.74□□□□□ -0.37
RPGR-206ENST00000474584 ARPC4-TTLL3A0A0A6YYG9 625 aa12.74□□□□□ -0.37
RPGR-206ENST00000474584 LOC100289279A0A1B0GTE1 492 aa12.74□□□□□ -0.37
RPGR-206ENST00000474584 C17orf105B2RV13 164 aa12.74□□□□□ -0.37
RPGR-206ENST00000474584 BET1O15155 118 aa12.74□□□□□ -0.37
RPGR-206ENST00000474584 PRKNO60260 465 aaPredicted RBP12.74□□□□□ -0.37
RPGR-206ENST00000474584 UTS2O95399 124 aa12.74□□□□□ -0.37
RPGR-206ENST00000474584 SIX6O95475 246 aa12.74□□□□□ -0.37
RPGR-206ENST00000474584 IL33O95760 270 aa12.74□□□□□ -0.37
RPGR-206ENST00000474584 HLA-DQA2P01906 255 aa12.74□□□□□ -0.37
RPGR-206ENST00000474584 CLPSP04118 112 aa12.74□□□□□ -0.37
RPGR-206ENST00000474584 ITGA5P08648 1049 aa12.74□□□□□ -0.37
RPGR-206ENST00000474584 CSF2RBP32927 897 aa12.74□□□□□ -0.37
RPGR-206ENST00000474584 EFNB2P52799 333 aa12.74□□□□□ -0.37
RPGR-206ENST00000474584 ACTBP60709 375 aa12.74□□□□□ -0.37
RPGR-206ENST00000474584 ACTG1P63261 375 aa12.74□□□□□ -0.37
RPGR-206ENST00000474584 GK2Q14410 553 aaPredicted RBP12.74□□□□□ -0.37
RPGR-206ENST00000474584 MPPED2Q15777 294 aa12.74□□□□□ -0.37
RPGR-206ENST00000474584 PXDC1Q5TGL8 231 aa12.74□□□□□ -0.37
RPGR-206ENST00000474584 RGS7BPQ6MZT1 257 aaPredicted RBP12.74□□□□□ -0.37
RPGR-206ENST00000474584 TSSK4Q6SA08 328 aa12.74□□□□□ -0.37
RPGR-206ENST00000474584 GSG1LQ6UXU4 331 aa12.74□□□□□ -0.37
RPGR-206ENST00000474584 TMEM184AQ6ZMB5 413 aa12.74□□□□□ -0.37
RPGR-206ENST00000474584 PM20D2Q8IYS1 436 aa12.74□□□□□ -0.37
RPGR-206ENST00000474584 MUC20Q8N307 709 aaPredicted RBP12.74□□□□□ -0.37
RPGR-206ENST00000474584 METTL27Q8N6F8 245 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms