RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, human

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPNE1-222	ENST00000473373	IGHV4-39	P01824	125 aa		10.02	□□□□□ -0.81
CPNE1-222	ENST00000473373	OR4A8	P0C604	315 aa		10.02	□□□□□ -0.81
CPNE1-222	ENST00000473373	ACADS	P16219	412 aa		10.02	□□□□□ -0.81
CPNE1-222	ENST00000473373	SERPINF1	P36955	418 aa		10.02	□□□□□ -0.81
CPNE1-222	ENST00000473373	GIPR	P48546	466 aa		10.02	□□□□□ -0.81
CPNE1-222	ENST00000473373	CTXN1	P60606	82 aa		10.02	□□□□□ -0.81
CPNE1-222	ENST00000473373	RAB1A	P62820	205 aa		10.02	□□□□□ -0.81
CPNE1-222	ENST00000473373	PLP2	Q04941	152 aa		10.02	□□□□□ -0.81
CPNE1-222	ENST00000473373	DAG1	Q14118	895 aa		10.02	□□□□□ -0.81
CPNE1-222	ENST00000473373	LAPTM4A	Q15012	233 aa		10.02	□□□□□ -0.81
CPNE1-222	ENST00000473373	C3orf36	Q3SXR2	165 aa		10.02	□□□□□ -0.81
CPNE1-222	ENST00000473373	SLC36A2	Q495M3	483 aa		10.02	□□□□□ -0.81
CPNE1-222	ENST00000473373	SLC16A14	Q7RTX9	510 aa		10.02	□□□□□ -0.81
CPNE1-222	ENST00000473373	PIWIL3	Q7Z3Z3	882 aa	Known RBP	10.02	□□□□□ -0.81
CPNE1-222	ENST00000473373	IGFN1	Q86VF2	1251 aa		10.02	□□□□□ -0.81
CPNE1-222	ENST00000473373	MEX3D	Q86XN8	651 aa	Known RBP	10.02	□□□□□ -0.81
CPNE1-222	ENST00000473373	PRIMA1	Q86XR5	153 aa		10.02	□□□□□ -0.81
CPNE1-222	ENST00000473373	LRRC18	Q8N456	261 aa		10.02	□□□□□ -0.81
CPNE1-222	ENST00000473373	FAM156A	Q8NDB6	213 aa		10.02	□□□□□ -0.81
CPNE1-222	ENST00000473373	MAPK1IP1L	Q8NDC0	245 aa		10.02	□□□□□ -0.81
CPNE1-222	ENST00000473373	OR51A7	Q8NH64	312 aa		10.02	□□□□□ -0.81
CPNE1-222	ENST00000473373	MOSPD2	Q8NHP6	518 aa		10.02	□□□□□ -0.81
CPNE1-222	ENST00000473373	ASB10	Q8WXI3	467 aa		10.02	□□□□□ -0.81
CPNE1-222	ENST00000473373	NSMAF	Q92636	917 aa		10.02	□□□□□ -0.81
CPNE1-222	ENST00000473373	TMEM54	Q969K7	222 aa		10.02	□□□□□ -0.81
CPNE1-222	ENST00000473373	COX4I2	Q96KJ9	171 aa		10.02	□□□□□ -0.81
CPNE1-222	ENST00000473373	ZNF347	Q96SE7	839 aa		10.02	□□□□□ -0.81
CPNE1-222	ENST00000473373	ZNF426	Q9BUY5	554 aa		10.02	□□□□□ -0.81
CPNE1-222	ENST00000473373	GRIP2	Q9C0E4	1043 aa		10.02	□□□□□ -0.81
CPNE1-222	ENST00000473373	CCNB1IP1	Q9NPC3	277 aa		10.02	□□□□□ -0.81
CPNE1-222	ENST00000473373	FBXL3	Q9UKT7	428 aa		10.02	□□□□□ -0.81
CPNE1-222	ENST00000473373	A4GNT	Q9UNA3	340 aa		10.02	□□□□□ -0.81
CPNE1-222	ENST00000473373	AURKC	Q9UQB9	309 aa		10.02	□□□□□ -0.81
CPNE1-222	ENST00000473373	VPS13C	Q709C8	3753 aa		10.02	□□□□□ -0.81
CPNE1-222	ENST00000473373	IGHV2OR16-5	A0A0B4J2B6	119 aa		10.01	□□□□□ -0.81
CPNE1-222	ENST00000473373	IQCM	A0A1B0GVH7	501 aa		10.01	□□□□□ -0.81
CPNE1-222	ENST00000473373	HTR3E	A5X5Y0	456 aa		10.01	□□□□□ -0.81
CPNE1-222	ENST00000473373		B9A039	149 aa		10.01	□□□□□ -0.81
CPNE1-222	ENST00000473373	hCG_2039718	K7EN88	272 aa		10.01	□□□□□ -0.81
CPNE1-222	ENST00000473373	XKRY	O14609	159 aa		10.01	□□□□□ -0.81
CPNE1-222	ENST00000473373	STAMBP	O95630	424 aa		10.01	□□□□□ -0.81
CPNE1-222	ENST00000473373	LY6G6D	O95868	133 aa		10.01	□□□□□ -0.81
CPNE1-222	ENST00000473373	IGKV3-15	P01624	115 aa		10.01	□□□□□ -0.81
CPNE1-222	ENST00000473373	H1F0	P07305	194 aa	Known RBP	10.01	□□□□□ -0.81
CPNE1-222	ENST00000473373	PGA4	P0DJD7	388 aa		10.01	□□□□□ -0.81
CPNE1-222	ENST00000473373	PGA3	P0DJD8	388 aa		10.01	□□□□□ -0.81
CPNE1-222	ENST00000473373	ITGA2	P17301	1181 aa		10.01	□□□□□ -0.81
CPNE1-222	ENST00000473373	NPR2	P20594	1047 aa		10.01	□□□□□ -0.81
CPNE1-222	ENST00000473373	CALCR	P30988	508 aa		10.01	□□□□□ -0.81
CPNE1-222	ENST00000473373	GPR4	P46093	362 aa		10.01	□□□□□ -0.81
CPNE1-222	ENST00000473373	MNAT1	P51948	309 aa		10.01	□□□□□ -0.81
CPNE1-222	ENST00000473373	HSF2	Q03933	536 aa		10.01	□□□□□ -0.81
CPNE1-222	ENST00000473373	RAB39A	Q14964	217 aa		10.01	□□□□□ -0.81
CPNE1-222	ENST00000473373	SAMD4B	Q5PRF9	694 aa	Known RBP	10.01	□□□□□ -0.81
CPNE1-222	ENST00000473373	PGAM4	Q8N0Y7	254 aa		10.01	□□□□□ -0.81
CPNE1-222	ENST00000473373	SLC22A24	Q8N4F4	322 aa		10.01	□□□□□ -0.81
CPNE1-222	ENST00000473373	FAM169B	Q8N8A8	192 aa		10.01	□□□□□ -0.81
CPNE1-222	ENST00000473373	ICA1L	Q8NDH6	482 aa		10.01	□□□□□ -0.81
CPNE1-222	ENST00000473373	RBM15B	Q8NDT2	890 aa	Known RBP	10.01	□□□□□ -0.81
CPNE1-222	ENST00000473373	OR4K5	Q8NGD3	323 aa		10.01	□□□□□ -0.81
CPNE1-222	ENST00000473373	IGFBPL1	Q8WX77	278 aa		10.01	□□□□□ -0.81
CPNE1-222	ENST00000473373	ACOT11	Q8WXI4	607 aa	Predicted RBP	10.01	□□□□□ -0.81
CPNE1-222	ENST00000473373	FAM168A	Q92567	244 aa		10.01	□□□□□ -0.81
CPNE1-222	ENST00000473373	MCHR2	Q969V1	340 aa		10.01	□□□□□ -0.81
CPNE1-222	ENST00000473373	BOD1	Q96IK1	185 aa		10.01	□□□□□ -0.81
CPNE1-222	ENST00000473373	NSMCE2	Q96MF7	247 aa		10.01	□□□□□ -0.81
CPNE1-222	ENST00000473373	RBP7	Q96R05	134 aa		10.01	□□□□□ -0.81
CPNE1-222	ENST00000473373	SH3GL3	Q99963	347 aa		10.01	□□□□□ -0.81
CPNE1-222	ENST00000473373	REG4	Q9BYZ8	158 aa		10.01	□□□□□ -0.81
CPNE1-222	ENST00000473373	LRMDA	Q9H2I8	198 aa		10.01	□□□□□ -0.81
CPNE1-222	ENST00000473373	PLK3	Q9H4B4	646 aa		10.01	□□□□□ -0.81
CPNE1-222	ENST00000473373	SEC61A2	Q9H9S3	476 aa		10.01	□□□□□ -0.81
CPNE1-222	ENST00000473373	CDH20	Q9HBT6	801 aa		10.01	□□□□□ -0.81
CPNE1-222	ENST00000473373	CRNN	Q9UBG3	495 aa	Predicted RBP	10.01	□□□□□ -0.81
CPNE1-222	ENST00000473373	ABCD2	Q9UBJ2	740 aa		10.01	□□□□□ -0.81
CPNE1-222	ENST00000473373	MAGEL2	Q9UJ55	1249 aa		10.01	□□□□□ -0.81
CPNE1-222	ENST00000473373	TMEM5	Q9Y2B1	443 aa		10.01	□□□□□ -0.81
CPNE1-222	ENST00000473373	CMAHP	Q9Y471	501 aa		10.01	□□□□□ -0.81
CPNE1-222	ENST00000473373	SNX13	Q9Y5W8	968 aa		10.01	□□□□□ -0.81
CPNE1-222	ENST00000473373	ENPP4	Q9Y6X5	453 aa		10.01	□□□□□ -0.81
CPNE1-222	ENST00000473373		A0A1W2PPL8	197 aa		10	□□□□□ -0.81
CPNE1-222	ENST00000473373	TRMU	O75648	421 aa	Known RBP	10	□□□□□ -0.81
CPNE1-222	ENST00000473373	PTH	P01270	115 aa		10	□□□□□ -0.81
CPNE1-222	ENST00000473373	IGF2	P01344	180 aa		10	□□□□□ -0.81
CPNE1-222	ENST00000473373	IGLV1-44	P01699	117 aa		10	□□□□□ -0.81
CPNE1-222	ENST00000473373	HEXA	P06865	529 aa		10	□□□□□ -0.81
CPNE1-222	ENST00000473373	PATE4	P0C8F1	98 aa		10	□□□□□ -0.81
CPNE1-222	ENST00000473373	CCNO	P22674	350 aa		10	□□□□□ -0.81
CPNE1-222	ENST00000473373	PCSK6	P29122	969 aa		10	□□□□□ -0.81
CPNE1-222	ENST00000473373	DSCR9	P59020	149 aa		10	□□□□□ -0.81
CPNE1-222	ENST00000473373	RPS23	P62266	143 aa	Known RBP	10	□□□□□ -0.81
CPNE1-222	ENST00000473373	SPIB	Q01892	262 aa		10	□□□□□ -0.81
CPNE1-222	ENST00000473373	SGCA	Q16586	387 aa		10	□□□□□ -0.81
CPNE1-222	ENST00000473373	TBC1D28	Q2M2D7	210 aa		10	□□□□□ -0.81
CPNE1-222	ENST00000473373	C11orf71	Q6IPW1	123 aa		10	□□□□□ -0.81
CPNE1-222	ENST00000473373	C8orf82	Q6P1X6	216 aa	Predicted RBP	10	□□□□□ -0.81
CPNE1-222	ENST00000473373	MYPOP	Q86VE0	399 aa	Predicted RBP	10	□□□□□ -0.81
CPNE1-222	ENST00000473373	SKA3	Q8IX90	412 aa		10	□□□□□ -0.81
CPNE1-222	ENST00000473373	DEFB107A	Q8IZN7	70 aa		10	□□□□□ -0.81
CPNE1-222	ENST00000473373	RNF113B	Q8IZP6	322 aa	Known RBP	10	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms