RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 UBA52P62987 128 aaKnown RBP12.4□□□□□ -0.42
DNMT3A-207ENST00000461228 SLC3A1Q07837 685 aa12.4□□□□□ -0.42
DNMT3A-207ENST00000461228 ZP4Q12836 540 aa12.4□□□□□ -0.42
DNMT3A-207ENST00000461228 PMS2P3Q13401 168 aa12.4□□□□□ -0.42
DNMT3A-207ENST00000461228 TBC1D28Q2M2D7 210 aa12.4□□□□□ -0.42
DNMT3A-207ENST00000461228 SLC36A2Q495M3 483 aa12.4□□□□□ -0.42
DNMT3A-207ENST00000461228 GTDC1Q4AE62 458 aa12.4□□□□□ -0.42
DNMT3A-207ENST00000461228 GLIPR1L2Q4G1C9 344 aa12.4□□□□□ -0.42
DNMT3A-207ENST00000461228 DCAF12L2Q5VW00 463 aa12.4□□□□□ -0.42
DNMT3A-207ENST00000461228 UNQ6126/PRO20091Q6UXV3 157 aa12.4□□□□□ -0.42
DNMT3A-207ENST00000461228 LRP11Q86VZ4 500 aa12.4□□□□□ -0.42
DNMT3A-207ENST00000461228 LRRC17Q8N6Y2 441 aa12.4□□□□□ -0.42
DNMT3A-207ENST00000461228 ZDHHC22Q8N966 263 aa12.4□□□□□ -0.42
DNMT3A-207ENST00000461228 OR1J2Q8NGS2 313 aa12.4□□□□□ -0.42
DNMT3A-207ENST00000461228 SYNPRQ8TBG9 265 aa12.4□□□□□ -0.42
DNMT3A-207ENST00000461228 ELMOD3Q96FG2 381 aa12.4□□□□□ -0.42
DNMT3A-207ENST00000461228 SLC25A44Q96H78 314 aaPredicted RBP12.4□□□□□ -0.42
DNMT3A-207ENST00000461228 MOGAT1Q96PD6 335 aa12.4□□□□□ -0.42
DNMT3A-207ENST00000461228 ZNF426Q9BUY5 554 aa12.4□□□□□ -0.42
DNMT3A-207ENST00000461228 NARFLQ9H6Q4 476 aa12.4□□□□□ -0.42
DNMT3A-207ENST00000461228 WDR55Q9H6Y2 383 aaPredicted RBP12.4□□□□□ -0.42
DNMT3A-207ENST00000461228 SAP30LQ9HAJ7 183 aa12.4□□□□□ -0.42
DNMT3A-207ENST00000461228 LPAR2Q9HBW0 351 aa12.4□□□□□ -0.42
DNMT3A-207ENST00000461228 WIPI2Q9Y4P8 454 aa12.4□□□□□ -0.42
DNMT3A-207ENST00000461228 VWFP04275 2813 aa12.4□□□□□ -0.42
DNMT3A-207ENST00000461228 NOTCH1P46531 2555 aa12.39□□□□□ -0.43
DNMT3A-207ENST00000461228 NPIPB13A6NJU9 1138 aa12.39□□□□□ -0.43
DNMT3A-207ENST00000461228 NPIPB4C9JG80 1138 aa12.39□□□□□ -0.43
DNMT3A-207ENST00000461228 CLDN34H7C241 214 aa12.39□□□□□ -0.43
DNMT3A-207ENST00000461228 PLPP2O43688 288 aa12.39□□□□□ -0.43
DNMT3A-207ENST00000461228 AVPP01185 164 aa12.39□□□□□ -0.43
DNMT3A-207ENST00000461228 NUDT7P0C024 238 aa12.39□□□□□ -0.43
DNMT3A-207ENST00000461228 PGA4P0DJD7 388 aa12.39□□□□□ -0.43
DNMT3A-207ENST00000461228 PGA3P0DJD8 388 aa12.39□□□□□ -0.43
DNMT3A-207ENST00000461228 LIPAP38571 399 aa12.39□□□□□ -0.43
DNMT3A-207ENST00000461228 MAGEB1P43366 347 aa12.39□□□□□ -0.43
DNMT3A-207ENST00000461228 HOXC5Q00444 222 aa12.39□□□□□ -0.43
DNMT3A-207ENST00000461228 RBBP4Q09028 425 aa12.39□□□□□ -0.43
DNMT3A-207ENST00000461228 RAB39AQ14964 217 aa12.39□□□□□ -0.43
DNMT3A-207ENST00000461228 HIST3H3Q16695 136 aa12.39□□□□□ -0.43
DNMT3A-207ENST00000461228 ZMAT1Q5H9K5 638 aa12.39□□□□□ -0.43
DNMT3A-207ENST00000461228 GCNT6Q5T4J0 391 aa12.39□□□□□ -0.43
DNMT3A-207ENST00000461228 CARD17Q5XLA6 110 aa12.39□□□□□ -0.43
DNMT3A-207ENST00000461228 TMEM53Q6P2H8 277 aa12.39□□□□□ -0.43
DNMT3A-207ENST00000461228 LINC00114Q6XXX2 140 aa12.39□□□□□ -0.43
DNMT3A-207ENST00000461228 RETREG3Q86VR2 466 aa12.39□□□□□ -0.43
DNMT3A-207ENST00000461228 COMTD1Q86VU5 262 aa12.39□□□□□ -0.43
DNMT3A-207ENST00000461228 MIER2Q8N344 545 aa12.39□□□□□ -0.43
DNMT3A-207ENST00000461228 C11orf40Q8WZ69 217 aa12.39□□□□□ -0.43
DNMT3A-207ENST00000461228 DVL3Q92997 716 aaPredicted RBP12.39□□□□□ -0.43
DNMT3A-207ENST00000461228 POP5Q969H6 163 aaKnown RBP12.39□□□□□ -0.43
DNMT3A-207ENST00000461228 MAL2Q969L2 176 aa12.39□□□□□ -0.43
DNMT3A-207ENST00000461228 ZNF566Q969W8 418 aa12.39□□□□□ -0.43
DNMT3A-207ENST00000461228 ZNF607Q96SK3 696 aa12.39□□□□□ -0.43
DNMT3A-207ENST00000461228 SLC6A7Q99884 636 aa12.39□□□□□ -0.43
DNMT3A-207ENST00000461228 EMC6Q9BV81 110 aa12.39□□□□□ -0.43
DNMT3A-207ENST00000461228 RSPO3Q9BXY4 272 aaPredicted RBP12.39□□□□□ -0.43
DNMT3A-207ENST00000461228 SMURF2Q9HAU4 748 aa12.39□□□□□ -0.43
DNMT3A-207ENST00000461228 TMEM27Q9HBJ8 222 aa12.39□□□□□ -0.43
DNMT3A-207ENST00000461228 ESM1Q9NQ30 184 aa12.39□□□□□ -0.43
DNMT3A-207ENST00000461228 TAAR3PQ9P1P4 343 aa12.39□□□□□ -0.43
DNMT3A-207ENST00000461228 DUSP13Q9UII6 198 aa12.39□□□□□ -0.43
DNMT3A-207ENST00000461228 TRIM33Q9UPN9 1127 aa12.39□□□□□ -0.43
DNMT3A-207ENST00000461228 TRBV5-3A0A0A0MS03 114 aa12.38□□□□□ -0.43
DNMT3A-207ENST00000461228 SERPINB7O75635 380 aa12.38□□□□□ -0.43
DNMT3A-207ENST00000461228 PRSS23O95084 383 aa12.38□□□□□ -0.43
DNMT3A-207ENST00000461228 IGF2P01344 180 aa12.38□□□□□ -0.43
DNMT3A-207ENST00000461228 FPR2P25090 351 aa12.38□□□□□ -0.43
DNMT3A-207ENST00000461228 CDK6Q00534 326 aa12.38□□□□□ -0.43
DNMT3A-207ENST00000461228 PIGFQ07326 219 aa12.38□□□□□ -0.43
DNMT3A-207ENST00000461228 MPP2Q14168 576 aa12.38□□□□□ -0.43
DNMT3A-207ENST00000461228 OR1Q1Q15612 314 aa12.38□□□□□ -0.43
DNMT3A-207ENST00000461228 HFEQ30201 348 aa12.38□□□□□ -0.43
DNMT3A-207ENST00000461228 DOK3Q7L591 496 aa12.38□□□□□ -0.43
DNMT3A-207ENST00000461228 SKA3Q8IX90 412 aa12.38□□□□□ -0.43
DNMT3A-207ENST00000461228 RAB1CQ92928 201 aa12.38□□□□□ -0.43
DNMT3A-207ENST00000461228 TXNDC15Q96J42 360 aa12.38□□□□□ -0.43
DNMT3A-207ENST00000461228 MPP4Q96JB8 637 aa12.38□□□□□ -0.43
DNMT3A-207ENST00000461228 DIRC2Q96SL1 478 aa12.38□□□□□ -0.43
DNMT3A-207ENST00000461228 PCDHAC1Q9H158 963 aa12.38□□□□□ -0.43
DNMT3A-207ENST00000461228 LRMDAQ9H2I8 198 aa12.38□□□□□ -0.43
DNMT3A-207ENST00000461228 CDH20Q9HBT6 801 aa12.38□□□□□ -0.43
DNMT3A-207ENST00000461228 CYSLTR2Q9NS75 346 aa12.38□□□□□ -0.43
DNMT3A-207ENST00000461228 SLC25A37Q9NYZ2 338 aa12.38□□□□□ -0.43
DNMT3A-207ENST00000461228 STX18Q9P2W9 335 aaKnown RBP12.38□□□□□ -0.43
DNMT3A-207ENST00000461228 OPN4Q9UHM6 478 aa12.38□□□□□ -0.43
DNMT3A-207ENST00000461228 ZNF229Q9UJW7 825 aa12.38□□□□□ -0.43
DNMT3A-207ENST00000461228 GMNCA6NCL1 334 aa12.37□□□□□ -0.43
DNMT3A-207ENST00000461228 A8MXK9 166 aa12.37□□□□□ -0.43
DNMT3A-207ENST00000461228 UBDO15205 165 aa12.37□□□□□ -0.43
DNMT3A-207ENST00000461228 DHHO43323 396 aa12.37□□□□□ -0.43
DNMT3A-207ENST00000461228 KCNAB3O43448 404 aa12.37□□□□□ -0.43
DNMT3A-207ENST00000461228 IGHG1P01857 330 aa12.37□□□□□ -0.43
DNMT3A-207ENST00000461228 CD55P08174 381 aa12.37□□□□□ -0.43
DNMT3A-207ENST00000461228 NR2C1P13056 603 aa12.37□□□□□ -0.43
DNMT3A-207ENST00000461228 TCN1P20061 433 aaPredicted RBP12.37□□□□□ -0.43
DNMT3A-207ENST00000461228 CPT2P23786 658 aa12.37□□□□□ -0.43
DNMT3A-207ENST00000461228 CDH12P55289 794 aa12.37□□□□□ -0.43
DNMT3A-207ENST00000461228 UCP2P55851 309 aa12.37□□□□□ -0.43
DNMT3A-207ENST00000461228 BIDP55957 195 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms