RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 LDLRP01130 860 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 IGKV1D-16P01601 117 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 OPN1SWP03999 348 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 LCKP06239 509 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 OR2T7P0C7T2 308 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 SAGP10523 405 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 FCGR1AP12314 374 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 TCN2P20062 427 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 TNFRSF1BP20333 461 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 ITGA3P26006 1051 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 CHATP28329 748 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 PIGAP37287 484 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 VHLP40337 213 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 MAGEA2P43356 314 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 NOVA1P51513 510 aaKnown RBP4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 SLURP1P55000 103 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 VLDLRP98155 873 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 PMPCAQ10713 525 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 TRIP10Q15642 601 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 ALG10Q5BKT4 473 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 ALG10BQ5I7T1 473 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 DCST2Q5T1A1 773 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 CCNJQ5T5M9 372 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 OGFRL1Q5TC84 451 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 FAM69BQ5VUD6 431 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 LPCAT4Q643R3 524 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 TYW3Q6IPR3 259 aaKnown RBP4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 NPSR1Q6W5P4 371 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 RTN4RL2Q86UN3 420 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 ZDHHC21Q8IVQ6 265 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 LNX2Q8N448 690 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 ZNF441Q8N8Z8 693 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 SMYD1Q8NB12 490 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 B3GNT7Q8NFL0 401 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 GPR32P1Q8NGA4 272 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 OR52B4Q8NGK2 314 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 OR2AJ1Q8NGZ0 328 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 SPPL2AQ8TCT8 520 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 CT55Q8WUE5 264 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 APOBEC4Q8WW27 367 aaKnown RBP4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 RASSF5Q8WWW0 418 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 OIT3Q8WWZ8 545 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 GEMIN6Q8WXD5 167 aaKnown RBP4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 C8orf44Q96CB5 159 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 RMND5BQ96G75 393 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 ART5Q96L15 291 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 IMMP1LQ96LU5 166 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 BTBD9Q96Q07 612 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 PIGQQ9BRB3 760 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 KRTAP17-1Q9BYP8 105 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 SEMA4CQ9C0C4 833 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 LHPPQ9H008 270 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 SEMA6AQ9H2E6 1030 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 VCX2Q9H322 139 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 TMEM231Q9H6L2 316 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 NTN4Q9HB63 628 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 CYSLTR2Q9NS75 346 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 COPS7AQ9UBW8 275 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 SEC14L3Q9UDX4 400 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 C19orf25Q9UFG5 118 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 FARSAQ9Y285 508 aaKnown RBP4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 SH3GLB1Q9Y371 365 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 GRIP1Q9Y3R0 1128 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 WDR45Q9Y484 360 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 EXPH5Q8NEV8 1989 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 FREM2Q5SZK8 3169 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 MPDZO75970 2070 aa4.65□□□□□ -1.67
HMGB1P4-201ENST00000455362 IGF2RP11717 2491 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 A0A1W2PQ72 361 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 DPPA5A6NC42 116 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 FRG2CA6NGY1 282 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 TMEM200CA6NKL6 621 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 NPIPB9F8W1W9 429 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 hCG_2039718K7EN88 272 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 ACOX3O15254 700 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 KIAA0513O60268 411 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 DPM1O60762 260 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 NEURL1O76050 574 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 DIRAS1O95057 198 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 EPPINO95925 133 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 LGI1O95970 557 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 CST1P01037 141 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 IGHEP01854 428 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 FABP3P05413 133 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 DBIP07108 87 aaKnown RBP4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 PABPC4LP0CB38 370 aaKnown RBP4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 ZNF26P17031 533 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 ITGA2P17301 1181 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 RPS4Y1P22090 263 aaKnown RBP4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 GALP22466 123 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 F8A1P23610 371 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 MMP11P24347 488 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 OTX2P32243 289 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 FOLR3P41439 243 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 OR1E2P47887 323 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 RPS15P62841 145 aaKnown RBP4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 HPCAP84074 193 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 EBPQ15125 230 aaKnown RBP4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 ZNF141Q15928 474 aa4.64□□□□□ -1.67
HMGB1P4-201ENST00000455362 MAPK14Q16539 360 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms