RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 NUBPLQ8TB37 319 aa3.08□□□□□ -1.92
HMGN3P1-201ENST00000453847 FRAT1Q92837 279 aaPredicted RBP3.08□□□□□ -1.92
HMGN3P1-201ENST00000453847 NAT6Q93015 286 aa3.08□□□□□ -1.92
HMGN3P1-201ENST00000453847 LRRC39Q96DD0 335 aa3.08□□□□□ -1.92
HMGN3P1-201ENST00000453847 PLEKHF1Q96S99 279 aa3.08□□□□□ -1.92
HMGN3P1-201ENST00000453847 ARHGDIGQ99819 225 aa3.08□□□□□ -1.92
HMGN3P1-201ENST00000453847 DEFB126Q9BYW3 111 aa3.08□□□□□ -1.92
HMGN3P1-201ENST00000453847 ROGDIQ9GZN7 287 aa3.08□□□□□ -1.92
HMGN3P1-201ENST00000453847 STMN4Q9H169 189 aaPredicted RBP3.08□□□□□ -1.92
HMGN3P1-201ENST00000453847 UGT1A7Q9HAW7 530 aa3.08□□□□□ -1.92
HMGN3P1-201ENST00000453847 UGT1A8Q9HAW9 530 aa3.08□□□□□ -1.92
HMGN3P1-201ENST00000453847 NTN4Q9HB63 628 aa3.08□□□□□ -1.92
HMGN3P1-201ENST00000453847 AGPAT4Q9NRZ5 378 aa3.08□□□□□ -1.92
HMGN3P1-201ENST00000453847 KCNIP1Q9NZI2 227 aa3.08□□□□□ -1.92
HMGN3P1-201ENST00000453847 XCL2Q9UBD3 114 aa3.08□□□□□ -1.92
HMGN3P1-201ENST00000453847 LGALS13Q9UHV8 139 aa3.08□□□□□ -1.92
HMGN3P1-201ENST00000453847 CFAP45Q9UL16 551 aa3.08□□□□□ -1.92
HMGN3P1-201ENST00000453847 ING4Q9UNL4 249 aa3.08□□□□□ -1.92
HMGN3P1-201ENST00000453847 RCL1Q9Y2P8 373 aaKnown RBP3.08□□□□□ -1.92
HMGN3P1-201ENST00000453847 A0A1B0GW55 424 aa3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 H0YHG0 523 aa3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 PES1O00541 588 aaKnown RBP3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 SLC9A3R1O14745 358 aaPredicted RBP3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 KDELR3O43731 214 aa3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 MGRN1O60291 552 aa3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 THY1P04216 161 aa3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 ACSM4P0C7M7 580 aa3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 DUX4L2P0CJ85 424 aa3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 DUX4L3P0CJ86 424 aa3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 DUX4L4P0CJ87 422 aa3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 DUX4L5P0CJ88 424 aa3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 DUX4L6P0CJ89 424 aa3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 DUX4L7P0CJ90 424 aa3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 NR2C1P13056 603 aa3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 EIF2S2P20042 333 aaKnown RBP3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 PTNP21246 168 aa3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 OR1E1P30953 314 aa3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 NUP62P37198 522 aaPredicted RBP3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 GLP1RP43220 463 aa3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 OR3A4PP47883 348 aa3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 RORCP51449 518 aa3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 RIPPLY3P57055 190 aa3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 SELENOTP62341 195 aa3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 ZNF92Q03936 586 aa3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 DMTNQ08495 405 aa3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 CDH17Q12864 832 aa3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 GPNMBQ14956 572 aa3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 WDR43Q15061 677 aaKnown RBP eCLIP3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 ATP6AP1Q15904 470 aa3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 FAM83EQ2M2I3 478 aa3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 ZNF829Q3KNS6 432 aaPredicted RBP3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 BEX5Q5H9J7 111 aa3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 PAGE2BQ5JRK9 111 aa3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 ATAD3CQ5T2N8 411 aa3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 MLIPQ5VWP3 458 aa3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 SLC25A25Q6KCM7 469 aa3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 CNIH2Q6PI25 160 aa3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 DUX4L9Q6RFH8 374 aaPredicted RBP3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 MOB1BQ7L9L4 216 aa3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 HSD17B13Q7Z5P4 300 aaPredicted RBP3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 APRG1Q8IVJ8 170 aa3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 TTC29Q8NA56 475 aaPredicted RBP3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 VN1R2Q8NFZ6 395 aa3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 OR51L1Q8NGJ5 315 aa3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 OR9G1Q8NH87 305 aa3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 LKAAEAR1Q8TD35 194 aa3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 CD300LFQ8TDQ1 290 aa3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 CA5BP1Q8WTZ4 195 aa3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 C7orf33Q8WU49 177 aa3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 ARPC1AQ92747 370 aa3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 OR5B12Q96R08 314 aa3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 ECSITQ9BQ95 431 aa3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 CHID1Q9BWS9 393 aa3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 ZYG11BQ9C0D3 744 aa3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 AGPAT3Q9NRZ7 376 aa3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 AIG1Q9NVV5 245 aa3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 HRASLS2Q9NWW9 162 aa3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 DUX4Q9UBX2 424 aa3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 STK38LQ9Y2H1 464 aa3.07□□□□□ -1.92
HMGN3P1-201ENST00000453847 GLYATL1P3A0A0U1RQE8 302 aa3.06□□□□□ -1.92
HMGN3P1-201ENST00000453847 ZNF816-ZNF321PA0A0X1KG74 233 aa3.06□□□□□ -1.92
HMGN3P1-201ENST00000453847 CDC7O00311 574 aa3.06□□□□□ -1.92
HMGN3P1-201ENST00000453847 AGPAT2O15120 278 aa3.06□□□□□ -1.92
HMGN3P1-201ENST00000453847 CRLF1O75462 422 aa3.06□□□□□ -1.92
HMGN3P1-201ENST00000453847 SERF1AO75920 110 aa3.06□□□□□ -1.92
HMGN3P1-201ENST00000453847 SNAPINO95295 136 aa3.06□□□□□ -1.92
HMGN3P1-201ENST00000453847 HSPB1P04792 205 aaKnown RBP3.06□□□□□ -1.92
HMGN3P1-201ENST00000453847 CCDC172P0C7W6 258 aa3.06□□□□□ -1.92
HMGN3P1-201ENST00000453847 CD151P48509 253 aa3.06□□□□□ -1.92
HMGN3P1-201ENST00000453847 DIO3P55073 304 aa3.06□□□□□ -1.92
HMGN3P1-201ENST00000453847 ATP5J2P56134 94 aa3.06□□□□□ -1.92
HMGN3P1-201ENST00000453847 LCN2P80188 198 aa3.06□□□□□ -1.92
HMGN3P1-201ENST00000453847 REG3AQ06141 175 aa3.06□□□□□ -1.92
HMGN3P1-201ENST00000453847 SLAQ13239 276 aa3.06□□□□□ -1.92
HMGN3P1-201ENST00000453847 FZD2Q14332 565 aa3.06□□□□□ -1.92
HMGN3P1-201ENST00000453847 TRAM2Q15035 370 aa3.06□□□□□ -1.92
HMGN3P1-201ENST00000453847 RPEL1Q2QD12 228 aa3.06□□□□□ -1.92
HMGN3P1-201ENST00000453847 UTF1Q5T230 341 aa3.06□□□□□ -1.92
HMGN3P1-201ENST00000453847 LIN9Q5TKA1 542 aa3.06□□□□□ -1.92
HMGN3P1-201ENST00000453847 SPECC1LQ69YQ0 1117 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms