RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 TREML1Q86YW5 311 aa17.37■□□□□ 0.37
LRCH3-208ENST00000443727 SKA3Q8IX90 412 aa17.37■□□□□ 0.37
LRCH3-208ENST00000443727 MOSPD2Q8NHP6 518 aa17.37■□□□□ 0.37
LRCH3-208ENST00000443727 GEMIN6Q8WXD5 167 aaKnown RBP17.37■□□□□ 0.37
LRCH3-208ENST00000443727 FAM162AQ96A26 154 aa17.37■□□□□ 0.37
LRCH3-208ENST00000443727 ZNF347Q96SE7 839 aa17.37■□□□□ 0.37
LRCH3-208ENST00000443727 KCTD14Q9BQ13 255 aaPredicted RBP17.37■□□□□ 0.37
LRCH3-208ENST00000443727 NSRP1Q9H0G5 558 aaKnown RBP17.37■□□□□ 0.37
LRCH3-208ENST00000443727 RNF121Q9H920 327 aa17.37■□□□□ 0.37
LRCH3-208ENST00000443727 STX18Q9P2W9 335 aaKnown RBP17.37■□□□□ 0.37
LRCH3-208ENST00000443727 RHCGQ9UBD6 479 aa17.37■□□□□ 0.37
LRCH3-208ENST00000443727 A4GNTQ9UNA3 340 aa17.37■□□□□ 0.37
LRCH3-208ENST00000443727 CMAHPQ9Y471 501 aa17.37■□□□□ 0.37
LRCH3-208ENST00000443727 ABCA2Q9BZC7 2435 aa17.37■□□□□ 0.37
LRCH3-208ENST00000443727 SH3PXD2BA1X283 911 aa17.36■□□□□ 0.37
LRCH3-208ENST00000443727 HTR3EA5X5Y0 456 aa17.36■□□□□ 0.37
LRCH3-208ENST00000443727 TLX2O43763 284 aaPredicted RBP17.36■□□□□ 0.37
LRCH3-208ENST00000443727 GPRIN2O60269 458 aa17.36■□□□□ 0.37
LRCH3-208ENST00000443727 PIP5K1CO60331 668 aa17.36■□□□□ 0.37
LRCH3-208ENST00000443727 PATE4P0C8F1 98 aa17.36■□□□□ 0.37
LRCH3-208ENST00000443727 SAGP10523 405 aaPredicted RBP17.36■□□□□ 0.37
LRCH3-208ENST00000443727 GSK3BP49841 420 aa17.36■□□□□ 0.37
LRCH3-208ENST00000443727 PPOXP50336 477 aa17.36■□□□□ 0.37
LRCH3-208ENST00000443727 SEC24CP53992 1094 aa17.36■□□□□ 0.37
LRCH3-208ENST00000443727 MYBPC1Q00872 1141 aa17.36■□□□□ 0.37
LRCH3-208ENST00000443727 LOXL1Q08397 574 aaPredicted RBP17.36■□□□□ 0.37
LRCH3-208ENST00000443727 RAB39AQ14964 217 aa17.36■□□□□ 0.37
LRCH3-208ENST00000443727 LAPTM4AQ15012 233 aa17.36■□□□□ 0.37
LRCH3-208ENST00000443727 IFI44LQ53G44 452 aa17.36■□□□□ 0.37
LRCH3-208ENST00000443727 TMEM53Q6P2H8 277 aa17.36■□□□□ 0.37
LRCH3-208ENST00000443727 HACD2Q6Y1H2 254 aa17.36■□□□□ 0.37
LRCH3-208ENST00000443727 NOXO1Q8NFA2 376 aa17.36■□□□□ 0.37
LRCH3-208ENST00000443727 OR4K5Q8NGD3 323 aa17.36■□□□□ 0.37
LRCH3-208ENST00000443727 LIPHQ8WWY8 451 aa17.36■□□□□ 0.37
LRCH3-208ENST00000443727 ASB10Q8WXI3 467 aa17.36■□□□□ 0.37
LRCH3-208ENST00000443727 MCHR2Q969V1 340 aa17.36■□□□□ 0.37
LRCH3-208ENST00000443727 BPIFA2Q96DR5 249 aa17.36■□□□□ 0.37
LRCH3-208ENST00000443727 TNFRSF13CQ96RJ3 184 aa17.36■□□□□ 0.37
LRCH3-208ENST00000443727 SH3GL3Q99963 347 aa17.36■□□□□ 0.37
LRCH3-208ENST00000443727 PIMREGQ9BSJ6 248 aa17.36■□□□□ 0.37
LRCH3-208ENST00000443727 ZNF224Q9NZL3 707 aa17.36■□□□□ 0.37
LRCH3-208ENST00000443727 ABCA1O95477 2261 aa17.35■□□□□ 0.37
LRCH3-208ENST00000443727 SERPINA1P01009 418 aa17.35■□□□□ 0.37
LRCH3-208ENST00000443727 ACADSP16219 412 aa17.35■□□□□ 0.37
LRCH3-208ENST00000443727 USF1P22415 310 aaPredicted RBP17.35■□□□□ 0.37
LRCH3-208ENST00000443727 RUNX1T1Q06455 604 aa17.35■□□□□ 0.37
LRCH3-208ENST00000443727 TOP3AQ13472 1001 aaPredicted RBP17.35■□□□□ 0.37
LRCH3-208ENST00000443727 TRAM2Q15035 370 aa17.35■□□□□ 0.37
LRCH3-208ENST00000443727 SLC36A2Q495M3 483 aa17.35■□□□□ 0.37
LRCH3-208ENST00000443727 ALG10Q5BKT4 473 aa17.35■□□□□ 0.37
LRCH3-208ENST00000443727 SLC16A14Q7RTX9 510 aa17.35■□□□□ 0.37
LRCH3-208ENST00000443727 CPLX4Q7Z7G2 160 aa17.35■□□□□ 0.37
LRCH3-208ENST00000443727 DPPA2Q7Z7J5 298 aa17.35■□□□□ 0.37
LRCH3-208ENST00000443727 HSH2DQ96JZ2 352 aa17.35■□□□□ 0.37
LRCH3-208ENST00000443727 MYOZ1Q9NP98 299 aaPredicted RBP17.35■□□□□ 0.37
LRCH3-208ENST00000443727 SNX13Q9Y5W8 968 aa17.35■□□□□ 0.37
LRCH3-208ENST00000443727 SONP18583 2426 aaKnown RBP17.35■□□□□ 0.37
LRCH3-208ENST00000443727 CENPBD1B2RD01 187 aa17.34■□□□□ 0.37
LRCH3-208ENST00000443727 J3KTA2 159 aa17.34■□□□□ 0.37
LRCH3-208ENST00000443727 NDUFS8O00217 210 aa17.34■□□□□ 0.37
LRCH3-208ENST00000443727 TRMUO75648 421 aaKnown RBP17.34■□□□□ 0.37
LRCH3-208ENST00000443727 SERPINA5P05154 406 aa17.34■□□□□ 0.37
LRCH3-208ENST00000443727 ZNF35P13682 527 aa17.34■□□□□ 0.37
LRCH3-208ENST00000443727 CR1P17927 2039 aa17.34■□□□□ 0.37
LRCH3-208ENST00000443727 PSME3P61289 254 aa17.34■□□□□ 0.37
LRCH3-208ENST00000443727 RPS23P62266 143 aaKnown RBP17.34■□□□□ 0.37
LRCH3-208ENST00000443727 GGTLC2Q14390 218 aa17.34■□□□□ 0.37
LRCH3-208ENST00000443727 HIST3H3Q16695 136 aa17.34■□□□□ 0.37
LRCH3-208ENST00000443727 TMEM249Q2WGJ8 235 aa17.34■□□□□ 0.37
LRCH3-208ENST00000443727 ARFGEF3Q5TH69 2177 aa17.34■□□□□ 0.37
LRCH3-208ENST00000443727 ZNF730Q6ZMV8 503 aa17.34■□□□□ 0.37
LRCH3-208ENST00000443727 CBLL1Q75N03 491 aa17.34■□□□□ 0.37
LRCH3-208ENST00000443727 CYP4Z1Q86W10 505 aa17.34■□□□□ 0.37
LRCH3-208ENST00000443727 NRMQ8IXM6 262 aa17.34■□□□□ 0.37
LRCH3-208ENST00000443727 CDK20Q8IZL9 346 aa17.34■□□□□ 0.37
LRCH3-208ENST00000443727 OFCC1Q8IZS5 231 aa17.34■□□□□ 0.37
LRCH3-208ENST00000443727 ZNF75AQ96N20 296 aa17.34■□□□□ 0.37
LRCH3-208ENST00000443727 DOK1Q99704 481 aa17.34■□□□□ 0.37
LRCH3-208ENST00000443727 MRPL13Q9BYD1 178 aaKnown RBP17.34■□□□□ 0.37
LRCH3-208ENST00000443727 TXNIPQ9H3M7 391 aa17.34■□□□□ 0.37
LRCH3-208ENST00000443727 A0A096LNT2 108 aa17.33■□□□□ 0.36
LRCH3-208ENST00000443727 LOC390937A0A1W2PQ73 354 aa17.33■□□□□ 0.36
LRCH3-208ENST00000443727 CRLF1O75462 422 aa17.33■□□□□ 0.36
LRCH3-208ENST00000443727 GMNNO75496 209 aa17.33■□□□□ 0.36
LRCH3-208ENST00000443727 ADRA2AP08913 450 aa17.33■□□□□ 0.36
LRCH3-208ENST00000443727 NR2C1P13056 603 aa17.33■□□□□ 0.36
LRCH3-208ENST00000443727 NCK1P16333 377 aa17.33■□□□□ 0.36
LRCH3-208ENST00000443727 PLP2Q04941 152 aa17.33■□□□□ 0.36
LRCH3-208ENST00000443727 CD47Q08722 323 aa17.33■□□□□ 0.36
LRCH3-208ENST00000443727 ARMC4Q5T2S8 1044 aa17.33■□□□□ 0.36
LRCH3-208ENST00000443727 C8orf82Q6P1X6 216 aaPredicted RBP17.33■□□□□ 0.36
LRCH3-208ENST00000443727 RRM2BQ7LG56 351 aa17.33■□□□□ 0.36
LRCH3-208ENST00000443727 SLC30A7Q8NEW0 376 aa17.33■□□□□ 0.36
LRCH3-208ENST00000443727 OR51A7Q8NH64 312 aa17.33■□□□□ 0.36
LRCH3-208ENST00000443727 FGFBP3Q8TAT2 258 aa17.33■□□□□ 0.36
LRCH3-208ENST00000443727 MYLK2Q9H1R3 596 aa17.33■□□□□ 0.36
LRCH3-208ENST00000443727 KCNN2Q9H2S1 579 aa17.33■□□□□ 0.36
LRCH3-208ENST00000443727 SPAG4Q9NPE6 437 aa17.33■□□□□ 0.36
LRCH3-208ENST00000443727 HIF3AQ9Y2N7 669 aa17.33■□□□□ 0.36
LRCH3-208ENST00000443727 A8MV72 311 aaPredicted RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms