RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 MISPQ8IVT2 679 aa6.88□□□□□ -1.31
HDAC9-214ENST00000441542 ZNF676Q8N7Q3 588 aa6.88□□□□□ -1.31
HDAC9-214ENST00000441542 OR51A4Q8NGJ6 313 aa6.88□□□□□ -1.31
HDAC9-214ENST00000441542 SPPL3Q8TCT6 385 aa6.88□□□□□ -1.31
HDAC9-214ENST00000441542 TMEM239Q8WW34 195 aa6.88□□□□□ -1.31
HDAC9-214ENST00000441542 RAB7BQ96AH8 199 aa6.88□□□□□ -1.31
HDAC9-214ENST00000441542 BPIFA2Q96DR5 249 aa6.88□□□□□ -1.31
HDAC9-214ENST00000441542 NECAB3Q96P71 396 aaPredicted RBP6.88□□□□□ -1.31
HDAC9-214ENST00000441542 GGACTQ9BVM4 153 aa6.88□□□□□ -1.31
HDAC9-214ENST00000441542 SMCO4Q9NRQ5 59 aa6.88□□□□□ -1.31
HDAC9-214ENST00000441542 FBXO34Q9NWN3 711 aa6.88□□□□□ -1.31
HDAC9-214ENST00000441542 ANKRD10Q9NXR5 420 aa6.88□□□□□ -1.31
HDAC9-214ENST00000441542 NCDNQ9UBB6 729 aa6.88□□□□□ -1.31
HDAC9-214ENST00000441542 CSAG2Q9Y5P2 127 aa6.88□□□□□ -1.31
HDAC9-214ENST00000441542 TRAV8-7A0A075B6U6 113 aa6.88□□□□□ -1.31
HDAC9-214ENST00000441542 A0A1W2PPE2 198 aa6.88□□□□□ -1.31
HDAC9-214ENST00000441542 METTL12A8MUP2 240 aa6.88□□□□□ -1.31
HDAC9-214ENST00000441542 C9JQL5 133 aa6.88□□□□□ -1.31
HDAC9-214ENST00000441542 FOXE1O00358 373 aaPredicted RBP6.88□□□□□ -1.31
HDAC9-214ENST00000441542 SOX1O00570 391 aaPredicted RBP6.88□□□□□ -1.31
HDAC9-214ENST00000441542 PEX12O00623 359 aa6.88□□□□□ -1.31
HDAC9-214ENST00000441542 EIF4E2O60573 245 aaKnown RBP6.88□□□□□ -1.31
HDAC9-214ENST00000441542 SMPD2O60906 423 aa6.88□□□□□ -1.31
HDAC9-214ENST00000441542 ITGA10O75578 1167 aa6.88□□□□□ -1.31
HDAC9-214ENST00000441542 AKAIN1P0CW23 69 aa6.88□□□□□ -1.31
HDAC9-214ENST00000441542 PRSS3P35030 304 aa6.88□□□□□ -1.31
HDAC9-214ENST00000441542 BSGP35613 385 aa6.88□□□□□ -1.31
HDAC9-214ENST00000441542 RNF4P78317 190 aa6.88□□□□□ -1.31
HDAC9-214ENST00000441542 ECH1Q13011 328 aa6.88□□□□□ -1.31
HDAC9-214ENST00000441542 DHRS2Q13268 280 aa6.88□□□□□ -1.31
HDAC9-214ENST00000441542 EBPQ15125 230 aaKnown RBP6.88□□□□□ -1.31
HDAC9-214ENST00000441542 FUT10Q6P4F1 479 aa6.88□□□□□ -1.31
HDAC9-214ENST00000441542 C22orf39Q6P5X5 142 aa6.88□□□□□ -1.31
HDAC9-214ENST00000441542 KCNRGQ8N5I3 272 aa6.88□□□□□ -1.31
HDAC9-214ENST00000441542 CHST4Q8NCG5 386 aa6.88□□□□□ -1.31
HDAC9-214ENST00000441542 BHLHE23Q8NDY6 225 aa6.88□□□□□ -1.31
HDAC9-214ENST00000441542 ZPLD1Q8TCW7 415 aa6.88□□□□□ -1.31
HDAC9-214ENST00000441542 TSEN15Q8WW01 171 aaKnown RBP6.88□□□□□ -1.31
HDAC9-214ENST00000441542 SRA1Q9HD15 236 aaKnown RBP6.88□□□□□ -1.31
HDAC9-214ENST00000441542 CLDND1Q9NY35 253 aa6.88□□□□□ -1.31
HDAC9-214ENST00000441542 TMEM72A0PK05 275 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 C5orf52A6NGY3 159 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 PIAS2O75928 621 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 ZIC2O95409 532 aaPredicted RBP6.87□□□□□ -1.31
HDAC9-214ENST00000441542 PAPLNO95428 1278 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 ELFN1P0C7U0 828 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 HIST1H1CP16403 213 aaKnown RBP6.87□□□□□ -1.31
HDAC9-214ENST00000441542 SPI1P17947 270 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 RCC1P18754 421 aaPredicted RBP6.87□□□□□ -1.31
HDAC9-214ENST00000441542 ADRA2CP18825 462 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 CERS1P27544 350 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 S100A2P29034 98 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 PBX2P40425 430 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 EIF2S3P41091 472 aaKnown RBP6.87□□□□□ -1.31
HDAC9-214ENST00000441542 EPHB3P54753 998 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 RPS11P62280 158 aaKnown RBP eCLIP6.87□□□□□ -1.31
HDAC9-214ENST00000441542 BDH1Q02338 343 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 NFATC4Q14934 902 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 NR0B2Q15466 257 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 TRAM1Q15629 374 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 MICBQ29980 383 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 CDNFQ49AH0 187 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 ACTBL2Q562R1 376 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 ACOT7LQ6ZUV0 252 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 C12orf40Q86WS4 652 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 FAM129CQ86XR2 697 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 BPIFB2Q8N4F0 458 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 PLPP7Q8NBV4 271 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 CCDC54Q8NEL0 328 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 FBXO22Q8NEZ5 403 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 OR10D4PQ8NGN7 298 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 MAFIPQ8WZ33 124 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 GAL3ST3Q96A11 431 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 HAVCR1Q96D42 359 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 MRPL38Q96DV4 380 aaKnown RBP6.87□□□□□ -1.31
HDAC9-214ENST00000441542 CNRIP1Q96F85 164 aaPredicted RBP6.87□□□□□ -1.31
HDAC9-214ENST00000441542 TGM7Q96PF1 710 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 CNN2Q99439 309 aaKnown RBP6.87□□□□□ -1.31
HDAC9-214ENST00000441542 AIF1LQ9BQI0 150 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 NRIP2Q9BQI9 281 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 TM7SF3Q9NS93 570 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 C19orf53Q9UNZ5 99 aaPredicted RBP6.87□□□□□ -1.31
HDAC9-214ENST00000441542 AMDHD2Q9Y303 409 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 OR51B4Q9Y5P0 310 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 HELZP42694 1942 aaKnown RBP6.87□□□□□ -1.31
HDAC9-214ENST00000441542 PLXND1Q9Y4D7 1925 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 SCN3AQ9NY46 2000 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 TRAV1-2A0A0B4J238 106 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 ZNF860A6NHJ4 632 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 GRXCR1A8MXD5 290 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 DCTN6O00399 190 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 SOX15O60248 233 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 LRP3O75074 770 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 LEFTY1O75610 366 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 GLSO94925 669 aaPredicted RBP6.87□□□□□ -1.31
HDAC9-214ENST00000441542 GPANK1O95872 356 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 OR8U8P0C7N1 319 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 EPCAMP16422 314 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 SLC11A1P49279 550 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 METAP1P53582 386 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms