RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 CLDN22Q8N7P3 220 aa12.92□□□□□ -0.34
RTN4-210ENST00000427710 LRRC75AQ8NAA5 344 aa12.92□□□□□ -0.34
RTN4-210ENST00000427710 NOXO1Q8NFA2 376 aa12.92□□□□□ -0.34
RTN4-210ENST00000427710 SLC7A13Q8TCU3 470 aa12.92□□□□□ -0.34
RTN4-210ENST00000427710 MCHR2Q969V1 340 aa12.92□□□□□ -0.34
RTN4-210ENST00000427710 MS4A3Q96HJ5 214 aa12.92□□□□□ -0.34
RTN4-210ENST00000427710 PYURFQ96I23 114 aa12.92□□□□□ -0.34
RTN4-210ENST00000427710 FAM46AQ96IP4 442 aaKnown RBP12.92□□□□□ -0.34
RTN4-210ENST00000427710 NSMCE2Q96MF7 247 aa12.92□□□□□ -0.34
RTN4-210ENST00000427710 SH3GL3Q99963 347 aa12.92□□□□□ -0.34
RTN4-210ENST00000427710 CACNG6Q9BXT2 260 aa12.92□□□□□ -0.34
RTN4-210ENST00000427710 B3GNT2Q9NY97 397 aa12.92□□□□□ -0.34
RTN4-210ENST00000427710 MAGEL2Q9UJ55 1249 aa12.92□□□□□ -0.34
RTN4-210ENST00000427710 ZNF346Q9UL40 294 aaKnown RBP12.92□□□□□ -0.34
RTN4-210ENST00000427710 HIF3AQ9Y2N7 669 aa12.92□□□□□ -0.34
RTN4-210ENST00000427710 FAM32AQ9Y421 112 aaKnown RBP12.92□□□□□ -0.34
RTN4-210ENST00000427710 H7C1Q1 480 aa12.91□□□□□ -0.34
RTN4-210ENST00000427710 SLC2A10O95528 541 aa12.91□□□□□ -0.34
RTN4-210ENST00000427710 IGKV3-15P01624 115 aa12.91□□□□□ -0.34
RTN4-210ENST00000427710 IGHV4-39P01824 125 aa12.91□□□□□ -0.34
RTN4-210ENST00000427710 SEMG1P04279 462 aa12.91□□□□□ -0.34
RTN4-210ENST00000427710 PAX1P15863 534 aa12.91□□□□□ -0.34
RTN4-210ENST00000427710 ZNF26P17031 533 aaPredicted RBP12.91□□□□□ -0.34
RTN4-210ENST00000427710 RHCEP18577 417 aa12.91□□□□□ -0.34
RTN4-210ENST00000427710 ATP6V1B2P21281 511 aa12.91□□□□□ -0.34
RTN4-210ENST00000427710 PTDSS1P48651 473 aaKnown RBP12.91□□□□□ -0.34
RTN4-210ENST00000427710 HGFACQ04756 655 aa12.91□□□□□ -0.34
RTN4-210ENST00000427710 FMODQ06828 376 aa12.91□□□□□ -0.34
RTN4-210ENST00000427710 FXNQ16595 210 aa12.91□□□□□ -0.34
RTN4-210ENST00000427710 IQCCQ4KMZ1 466 aa12.91□□□□□ -0.34
RTN4-210ENST00000427710 ARMC4Q5T2S8 1044 aa12.91□□□□□ -0.34
RTN4-210ENST00000427710 OAFQ86UD1 273 aa12.91□□□□□ -0.34
RTN4-210ENST00000427710 SKA3Q8IX90 412 aa12.91□□□□□ -0.34
RTN4-210ENST00000427710 NSMAFQ92636 917 aa12.91□□□□□ -0.34
RTN4-210ENST00000427710 FBXO17Q96EF6 278 aa12.91□□□□□ -0.34
RTN4-210ENST00000427710 TXNIPQ9H3M7 391 aa12.91□□□□□ -0.34
RTN4-210ENST00000427710 CBLN4Q9NTU7 201 aa12.91□□□□□ -0.34
RTN4-210ENST00000427710 FAIMQ9NVQ4 179 aa12.91□□□□□ -0.34
RTN4-210ENST00000427710 TMEM38BQ9NVV0 291 aa12.91□□□□□ -0.34
RTN4-210ENST00000427710 IGHV2OR16-5A0A0B4J2B6 119 aa12.9□□□□□ -0.34
RTN4-210ENST00000427710 PDE5AO76074 875 aa12.9□□□□□ -0.34
RTN4-210ENST00000427710 CRYAAP02489 173 aa12.9□□□□□ -0.34
RTN4-210ENST00000427710 APOBEC3AP31941 199 aaPredicted RBP12.9□□□□□ -0.34
RTN4-210ENST00000427710 CDAP32320 146 aa12.9□□□□□ -0.34
RTN4-210ENST00000427710 ACVR1BP36896 505 aa12.9□□□□□ -0.34
RTN4-210ENST00000427710 GIPRP48546 466 aa12.9□□□□□ -0.34
RTN4-210ENST00000427710 DAP3P51398 398 aaKnown RBP12.9□□□□□ -0.34
RTN4-210ENST00000427710 ERVK-25P63136 954 aa12.9□□□□□ -0.34
RTN4-210ENST00000427710 SPIBQ01892 262 aa12.9□□□□□ -0.34
RTN4-210ENST00000427710 CD47Q08722 323 aa12.9□□□□□ -0.34
RTN4-210ENST00000427710 RAB39AQ14964 217 aa12.9□□□□□ -0.34
RTN4-210ENST00000427710 HIST3H3Q16695 136 aa12.9□□□□□ -0.34
RTN4-210ENST00000427710 GSG1Q2KHT4 349 aa12.9□□□□□ -0.34
RTN4-210ENST00000427710 PRSS57Q6UWY2 283 aa12.9□□□□□ -0.34
RTN4-210ENST00000427710 Q71RC1 249 aaPredicted RBP12.9□□□□□ -0.34
RTN4-210ENST00000427710 RRM2BQ7LG56 351 aa12.9□□□□□ -0.34
RTN4-210ENST00000427710 RNF113BQ8IZP6 322 aaKnown RBP12.9□□□□□ -0.34
RTN4-210ENST00000427710 SLC22A24Q8N4F4 322 aa12.9□□□□□ -0.34
RTN4-210ENST00000427710 OR4K5Q8NGD3 323 aa12.9□□□□□ -0.34
RTN4-210ENST00000427710 TRMT61AQ96FX7 289 aaKnown RBP12.9□□□□□ -0.34
RTN4-210ENST00000427710 ZNF75AQ96N20 296 aa12.9□□□□□ -0.34
RTN4-210ENST00000427710 TSPAN32Q96QS1 320 aa12.9□□□□□ -0.34
RTN4-210ENST00000427710 KATNB1Q9BVA0 655 aa12.9□□□□□ -0.34
RTN4-210ENST00000427710 MRPL13Q9BYD1 178 aaKnown RBP12.9□□□□□ -0.34
RTN4-210ENST00000427710 NDE1Q9NXR1 346 aa12.9□□□□□ -0.34
RTN4-210ENST00000427710 NAV3Q8IVL0 2385 aa12.89□□□□□ -0.35
RTN4-210ENST00000427710 H7C1C5 153 aa12.89□□□□□ -0.35
RTN4-210ENST00000427710 THBS4P35443 961 aa12.89□□□□□ -0.35
RTN4-210ENST00000427710 ARR3P36575 388 aa12.89□□□□□ -0.35
RTN4-210ENST00000427710 RPL27P61353 136 aaKnown RBP12.89□□□□□ -0.35
RTN4-210ENST00000427710 LCN6P62502 163 aa12.89□□□□□ -0.35
RTN4-210ENST00000427710 RAB1AP62820 205 aa12.89□□□□□ -0.35
RTN4-210ENST00000427710 C3orf36Q3SXR2 165 aa12.89□□□□□ -0.35
RTN4-210ENST00000427710 C1QTNF12Q5T7M4 302 aa12.89□□□□□ -0.35
RTN4-210ENST00000427710 ZNF544Q6NX49 715 aa12.89□□□□□ -0.35
RTN4-210ENST00000427710 ZNF627Q7L945 461 aa12.89□□□□□ -0.35
RTN4-210ENST00000427710 CDK20Q8IZL9 346 aa12.89□□□□□ -0.35
RTN4-210ENST00000427710 LRRC18Q8N456 261 aa12.89□□□□□ -0.35
RTN4-210ENST00000427710 FAM169BQ8N8A8 192 aa12.89□□□□□ -0.35
RTN4-210ENST00000427710 CLPTM1LQ96KA5 538 aa12.89□□□□□ -0.35
RTN4-210ENST00000427710 DHRS1Q96LJ7 313 aa12.89□□□□□ -0.35
RTN4-210ENST00000427710 SEPHS2Q99611 448 aa12.89□□□□□ -0.35
RTN4-210ENST00000427710 GPA33Q99795 319 aa12.89□□□□□ -0.35
RTN4-210ENST00000427710 IL20RAQ9UHF4 553 aa12.89□□□□□ -0.35
RTN4-210ENST00000427710 ADAM18Q9Y3Q7 739 aa12.89□□□□□ -0.35
RTN4-210ENST00000427710 A0A1W2PRQ8 180 aa12.88□□□□□ -0.35
RTN4-210ENST00000427710 SSX4O60224 188 aa12.88□□□□□ -0.35
RTN4-210ENST00000427710 TMCC2O75069 709 aa12.88□□□□□ -0.35
RTN4-210ENST00000427710 IGHMP01871 453 aa12.88□□□□□ -0.35
RTN4-210ENST00000427710 ZNF14P17017 642 aaPredicted RBP12.88□□□□□ -0.35
RTN4-210ENST00000427710 CALB2P22676 271 aa12.88□□□□□ -0.35
RTN4-210ENST00000427710 RPL4P36578 427 aaKnown RBP12.88□□□□□ -0.35
RTN4-210ENST00000427710 OMPP47874 163 aa12.88□□□□□ -0.35
RTN4-210ENST00000427710 SLC9A3P48764 834 aa12.88□□□□□ -0.35
RTN4-210ENST00000427710 ZNF84P51523 738 aa12.88□□□□□ -0.35
RTN4-210ENST00000427710 MNAT1P51948 309 aa12.88□□□□□ -0.35
RTN4-210ENST00000427710 TNK1Q13470 666 aa12.88□□□□□ -0.35
RTN4-210ENST00000427710 DGCR6Q14129 220 aa12.88□□□□□ -0.35
RTN4-210ENST00000427710 CLEC12BQ2HXU8 276 aa12.88□□□□□ -0.35
RTN4-210ENST00000427710 MST1LQ2TV78 715 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms