RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 HIST1H1TP22492 207 aaPredicted RBP6.96□□□□□ -1.3
BRCA1-201ENST00000352993 ADH6P28332 368 aa6.96□□□□□ -1.3
BRCA1-201ENST00000352993 CCKBRP32239 447 aa6.96□□□□□ -1.3
BRCA1-201ENST00000352993 MECP2P51608 486 aaKnown RBP6.96□□□□□ -1.3
BRCA1-201ENST00000352993 SKP2Q13309 424 aa6.96□□□□□ -1.3
BRCA1-201ENST00000352993 GAS6Q14393 721 aa6.96□□□□□ -1.3
BRCA1-201ENST00000352993 ZNF345Q14585 488 aa6.96□□□□□ -1.3
BRCA1-201ENST00000352993 TAF1CQ15572 869 aaPredicted RBP6.96□□□□□ -1.3
BRCA1-201ENST00000352993 DUSP5Q16690 384 aa6.96□□□□□ -1.3
BRCA1-201ENST00000352993 EXOSC6Q5RKV6 272 aaKnown RBP6.96□□□□□ -1.3
BRCA1-201ENST00000352993 LIPNQ5VXI9 398 aa6.96□□□□□ -1.3
BRCA1-201ENST00000352993 AMZ2Q86W34 360 aa6.96□□□□□ -1.3
BRCA1-201ENST00000352993 PARGQ86W56 976 aa6.96□□□□□ -1.3
BRCA1-201ENST00000352993 C12orf40Q86WS4 652 aa6.96□□□□□ -1.3
BRCA1-201ENST00000352993 TMEM25Q86YD3 366 aa6.96□□□□□ -1.3
BRCA1-201ENST00000352993 RNF113BQ8IZP6 322 aaKnown RBP6.96□□□□□ -1.3
BRCA1-201ENST00000352993 RAB42Q8N4Z0 105 aa6.96□□□□□ -1.3
BRCA1-201ENST00000352993 CHST4Q8NCG5 386 aa6.96□□□□□ -1.3
BRCA1-201ENST00000352993 OR4S1Q8NGB4 309 aa6.96□□□□□ -1.3
BRCA1-201ENST00000352993 ZNF461Q8TAF7 563 aa6.96□□□□□ -1.3
BRCA1-201ENST00000352993 TSSK2Q96PF2 358 aa6.96□□□□□ -1.3
BRCA1-201ENST00000352993 PHB2Q99623 299 aa6.96□□□□□ -1.3
BRCA1-201ENST00000352993 KXD1Q9BQD3 176 aa6.96□□□□□ -1.3
BRCA1-201ENST00000352993 TGIF2Q9GZN2 237 aa6.96□□□□□ -1.3
BRCA1-201ENST00000352993 SEMA6CQ9H3T2 930 aa6.96□□□□□ -1.3
BRCA1-201ENST00000352993 RXFP3Q9NSD7 469 aa6.96□□□□□ -1.3
BRCA1-201ENST00000352993 A0A0A6YYD5 115 aa6.96□□□□□ -1.3
BRCA1-201ENST00000352993 PMS2P1A4D2B8 440 aa6.96□□□□□ -1.3
BRCA1-201ENST00000352993 FITM1A5D6W6 292 aa6.96□□□□□ -1.3
BRCA1-201ENST00000352993 UBE2CO00762 179 aa6.96□□□□□ -1.3
BRCA1-201ENST00000352993 SRPX2O60687 465 aaPredicted RBP6.96□□□□□ -1.3
BRCA1-201ENST00000352993 ZNF432O94892 652 aa6.96□□□□□ -1.3
BRCA1-201ENST00000352993 IGHV2-70P01814 119 aa6.96□□□□□ -1.3
BRCA1-201ENST00000352993 RPLP2P05387 115 aaKnown RBP6.96□□□□□ -1.3
BRCA1-201ENST00000352993 PRKAR2AP13861 404 aaKnown RBP6.96□□□□□ -1.3
BRCA1-201ENST00000352993 ZNF136P52737 540 aa6.96□□□□□ -1.3
BRCA1-201ENST00000352993 DCDP81605 110 aaKnown RBP6.96□□□□□ -1.3
BRCA1-201ENST00000352993 SGCAQ16586 387 aa6.96□□□□□ -1.3
BRCA1-201ENST00000352993 MORN1Q5T089 497 aa6.96□□□□□ -1.3
BRCA1-201ENST00000352993 ATPAF1Q5TC12 328 aaPredicted RBP6.96□□□□□ -1.3
BRCA1-201ENST00000352993 PRAMEF8Q5VWM4 474 aa6.96□□□□□ -1.3
BRCA1-201ENST00000352993 PRAMEF7Q5VXH5 474 aa6.96□□□□□ -1.3
BRCA1-201ENST00000352993 OTPQ5XKR4 325 aa6.96□□□□□ -1.3
BRCA1-201ENST00000352993 ZNF761Q86XN6 746 aaPredicted RBP6.96□□□□□ -1.3
BRCA1-201ENST00000352993 CACUL1Q86Y37 369 aa6.96□□□□□ -1.3
BRCA1-201ENST00000352993 OR10AC1Q8NH08 325 aa6.96□□□□□ -1.3
BRCA1-201ENST00000352993 SP7Q8TDD2 431 aaPredicted RBP6.96□□□□□ -1.3
BRCA1-201ENST00000352993 CD300LFQ8TDQ1 290 aa6.96□□□□□ -1.3
BRCA1-201ENST00000352993 ZNRF4Q8WWF5 429 aa6.96□□□□□ -1.3
BRCA1-201ENST00000352993 HIST1H2BAQ96A08 127 aa6.96□□□□□ -1.3
BRCA1-201ENST00000352993 RASD2Q96D21 266 aa6.96□□□□□ -1.3
BRCA1-201ENST00000352993 SLC25A21Q9BQT8 299 aaPredicted RBP6.96□□□□□ -1.3
BRCA1-201ENST00000352993 RSPH9Q9H1X1 276 aaPredicted RBP6.96□□□□□ -1.3
BRCA1-201ENST00000352993 PELI2Q9HAT8 420 aa6.96□□□□□ -1.3
BRCA1-201ENST00000352993 ACKR4Q9NPB9 350 aa6.96□□□□□ -1.3
BRCA1-201ENST00000352993 FBXO34Q9NWN3 711 aa6.96□□□□□ -1.3
BRCA1-201ENST00000352993 ZNF223Q9UK11 482 aaPredicted RBP6.96□□□□□ -1.3
BRCA1-201ENST00000352993 LRRC72A6NJI9 287 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 BLOC1S5-TXNDC5H3BN57 136 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 FBP1P09467 338 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 SLC35G4P0C7Q5 338 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 RAB6AP20340 208 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 SLC2A5P22732 501 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 CD96P40200 585 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 CSNK1G2P78368 415 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 REEP5Q00765 189 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 RAB11BQ15907 218 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 C2orf76Q3KRA6 126 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 ALG10BQ5I7T1 473 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 NKAIN2Q5VXU1 208 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 UNQ9370/PRO34162Q6UXP9 181 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 FAM24BQ8N5W8 94 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 C15orf54Q8N8G6 183 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 PLPP7Q8NBV4 271 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 VN1R2Q8NFZ6 395 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 OR7G2Q8NG99 324 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 FGF13Q92913 245 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 PIK3IP1Q96FE7 263 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 TOLLIPQ9H0E2 274 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 FN3KRPQ9HA64 309 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 TM7SF3Q9NS93 570 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 GSKIPQ9P0R6 139 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 RCC2Q9P258 522 aaKnown RBP6.95□□□□□ -1.3
BRCA1-201ENST00000352993 PCDHGA1Q9Y5H4 931 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 A0A1B0GV50 99 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 LATO43561 262 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 NDUFB2O95178 105 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 IFNA6P05013 189 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 ARG1P05089 322 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 CTSLP07711 333 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 S100A10P60903 97 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 PPP1R1AQ13522 171 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 NR0B2Q15466 257 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 USF2Q15853 346 aaPredicted RBP6.95□□□□□ -1.3
BRCA1-201ENST00000352993 RNASE10Q5GAN6 216 aaKnown RBP6.95□□□□□ -1.3
BRCA1-201ENST00000352993 VWA2Q5GFL6 755 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 ASTLQ6HA08 431 aaPredicted RBP6.95□□□□□ -1.3
BRCA1-201ENST00000352993 MFSD12Q6NUT3 480 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 LEG1Q6P5S2 330 aa6.95□□□□□ -1.3
BRCA1-201ENST00000352993 ZNF813Q6ZN06 617 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms