RNA–Protein interactions for RNA: ENST00000348264.6

CLCC1-202, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-202ENST00000348264 UBL3O95164 117 aa11.47□□□□□ -0.57
CLCC1-202ENST00000348264 IGFBP1P08833 259 aaPredicted RBP11.47□□□□□ -0.57
CLCC1-202ENST00000348264 QDPRP09417 244 aa11.47□□□□□ -0.57
CLCC1-202ENST00000348264 TSPAN19P0C672 248 aa11.47□□□□□ -0.57
CLCC1-202ENST00000348264 NR4A1P22736 598 aa11.47□□□□□ -0.57
CLCC1-202ENST00000348264 YAP1P46937 504 aaKnown RBP11.47□□□□□ -0.57
CLCC1-202ENST00000348264 PDLIM4P50479 330 aa11.47□□□□□ -0.57
CLCC1-202ENST00000348264 CLRN1P58418 232 aa11.47□□□□□ -0.57
CLCC1-202ENST00000348264 RAB1AP62820 205 aa11.47□□□□□ -0.57
CLCC1-202ENST00000348264 VLDLRP98155 873 aa11.47□□□□□ -0.57
CLCC1-202ENST00000348264 MYBPC1Q00872 1141 aa11.47□□□□□ -0.57
CLCC1-202ENST00000348264 RAB39AQ14964 217 aa11.47□□□□□ -0.57
CLCC1-202ENST00000348264 HIST3H3Q16695 136 aa11.47□□□□□ -0.57
CLCC1-202ENST00000348264 C6orf52Q5T4I8 152 aa11.47□□□□□ -0.57
CLCC1-202ENST00000348264 PIWIL3Q7Z3Z3 882 aaKnown RBP11.47□□□□□ -0.57
CLCC1-202ENST00000348264 ZCCHC24Q8N2G6 241 aaKnown RBP11.47□□□□□ -0.57
CLCC1-202ENST00000348264 LIPHQ8WWY8 451 aa11.47□□□□□ -0.57
CLCC1-202ENST00000348264 SEPHS2Q99611 448 aa11.47□□□□□ -0.57
CLCC1-202ENST00000348264 DOK1Q99704 481 aa11.47□□□□□ -0.57
CLCC1-202ENST00000348264 SH3GL3Q99963 347 aa11.47□□□□□ -0.57
CLCC1-202ENST00000348264 MRPL13Q9BYD1 178 aaKnown RBP11.47□□□□□ -0.57
CLCC1-202ENST00000348264 INIPQ9NRY2 104 aa11.47□□□□□ -0.57
CLCC1-202ENST00000348264 MAN2C1Q9NTJ4 1040 aa11.47□□□□□ -0.57
CLCC1-202ENST00000348264 MED31Q9Y3C7 131 aa11.47□□□□□ -0.57
CLCC1-202ENST00000348264 MXRA5Q9NR99 2828 aa11.46□□□□□ -0.57
CLCC1-202ENST00000348264 J3KTA2 159 aa11.46□□□□□ -0.57
CLCC1-202ENST00000348264 CXCR6O00574 342 aa11.46□□□□□ -0.57
CLCC1-202ENST00000348264 FFAR1O14842 300 aa11.46□□□□□ -0.57
CLCC1-202ENST00000348264 CCDC22O60826 627 aa11.46□□□□□ -0.57
CLCC1-202ENST00000348264 TRMUO75648 421 aaKnown RBP11.46□□□□□ -0.57
CLCC1-202ENST00000348264 ZNF682O95780 498 aa11.46□□□□□ -0.57
CLCC1-202ENST00000348264 OR8G3PP0DMU2 310 aa11.46□□□□□ -0.57
CLCC1-202ENST00000348264 ZNF16P17020 682 aaPredicted RBP11.46□□□□□ -0.57
CLCC1-202ENST00000348264 USF1P22415 310 aaPredicted RBP11.46□□□□□ -0.57
CLCC1-202ENST00000348264 GSK3BP49841 420 aa11.46□□□□□ -0.57
CLCC1-202ENST00000348264 NUDT2P50583 147 aa11.46□□□□□ -0.57
CLCC1-202ENST00000348264 DAP3P51398 398 aaKnown RBP11.46□□□□□ -0.57
CLCC1-202ENST00000348264 ST3GAL3Q11203 375 aa11.46□□□□□ -0.57
CLCC1-202ENST00000348264 CARTPTQ16568 116 aa11.46□□□□□ -0.57
CLCC1-202ENST00000348264 ARMC4Q5T2S8 1044 aa11.46□□□□□ -0.57
CLCC1-202ENST00000348264 MEX3DQ86XN8 651 aaKnown RBP11.46□□□□□ -0.57
CLCC1-202ENST00000348264 OFCC1Q8IZS5 231 aa11.46□□□□□ -0.57
CLCC1-202ENST00000348264 SYT14Q8NB59 555 aa11.46□□□□□ -0.57
CLCC1-202ENST00000348264 OR4K5Q8NGD3 323 aa11.46□□□□□ -0.57
CLCC1-202ENST00000348264 LZICQ8WZA0 190 aa11.46□□□□□ -0.57
CLCC1-202ENST00000348264 MCHR2Q969V1 340 aa11.46□□□□□ -0.57
CLCC1-202ENST00000348264 PIMREGQ9BSJ6 248 aa11.46□□□□□ -0.57
CLCC1-202ENST00000348264 MRPL37Q9BZE1 423 aaKnown RBP11.46□□□□□ -0.57
CLCC1-202ENST00000348264 DENND2DQ9H6A0 471 aaPredicted RBP11.46□□□□□ -0.57
CLCC1-202ENST00000348264 DYNLRB1Q9NP97 96 aa11.46□□□□□ -0.57
CLCC1-202ENST00000348264 RHCGQ9UBD6 479 aa11.46□□□□□ -0.57
CLCC1-202ENST00000348264 AP3M1Q9Y2T2 418 aa11.46□□□□□ -0.57
CLCC1-202ENST00000348264 FBN1P35555 2871 aaKnown RBP11.46□□□□□ -0.57
CLCC1-202ENST00000348264 SH3PXD2BA1X283 911 aa11.45□□□□□ -0.58
CLCC1-202ENST00000348264 A8MV72 311 aaPredicted RBP11.45□□□□□ -0.58
CLCC1-202ENST00000348264 NDUFS8O00217 210 aa11.45□□□□□ -0.58
CLCC1-202ENST00000348264 SLC2A10O95528 541 aa11.45□□□□□ -0.58
CLCC1-202ENST00000348264 IFNW1P05000 195 aa11.45□□□□□ -0.58
CLCC1-202ENST00000348264 SERPINA5P05154 406 aa11.45□□□□□ -0.58
CLCC1-202ENST00000348264 IGHV4-31P0DP07 118 aa11.45□□□□□ -0.58
CLCC1-202ENST00000348264 IFI30P13284 250 aa11.45□□□□□ -0.58
CLCC1-202ENST00000348264 ACADSP16219 412 aa11.45□□□□□ -0.58
CLCC1-202ENST00000348264 MAKP20794 623 aa11.45□□□□□ -0.58
CLCC1-202ENST00000348264 NR4A2P43354 598 aa11.45□□□□□ -0.58
CLCC1-202ENST00000348264 SEC24CP53992 1094 aa11.45□□□□□ -0.58
CLCC1-202ENST00000348264 FMODQ06828 376 aa11.45□□□□□ -0.58
CLCC1-202ENST00000348264 TOP3AQ13472 1001 aaPredicted RBP11.45□□□□□ -0.58
CLCC1-202ENST00000348264 GGTLC2Q14390 218 aa11.45□□□□□ -0.58
CLCC1-202ENST00000348264 LAPTM4AQ15012 233 aa11.45□□□□□ -0.58
CLCC1-202ENST00000348264 FXNQ16595 210 aa11.45□□□□□ -0.58
CLCC1-202ENST00000348264 HACD2Q6Y1H2 254 aa11.45□□□□□ -0.58
CLCC1-202ENST00000348264 CBLL1Q75N03 491 aa11.45□□□□□ -0.58
CLCC1-202ENST00000348264 HDDC2Q7Z4H3 204 aa11.45□□□□□ -0.58
CLCC1-202ENST00000348264 NRMQ8IXM6 262 aa11.45□□□□□ -0.58
CLCC1-202ENST00000348264 PAQR4Q8N4S7 273 aaPredicted RBP11.45□□□□□ -0.58
CLCC1-202ENST00000348264 RBM15BQ8NDT2 890 aaKnown RBP11.45□□□□□ -0.58
CLCC1-202ENST00000348264 GEMIN6Q8WXD5 167 aaKnown RBP11.45□□□□□ -0.58
CLCC1-202ENST00000348264 HDAC2Q92769 488 aaKnown RBP11.45□□□□□ -0.58
CLCC1-202ENST00000348264 MRPL24Q96A35 216 aaKnown RBP11.45□□□□□ -0.58
CLCC1-202ENST00000348264 NMD3Q96D46 503 aaKnown RBP11.45□□□□□ -0.58
CLCC1-202ENST00000348264 BPIFA2Q96DR5 249 aa11.45□□□□□ -0.58
CLCC1-202ENST00000348264 HSH2DQ96JZ2 352 aa11.45□□□□□ -0.58
CLCC1-202ENST00000348264 FOXN4Q96NZ1 517 aa11.45□□□□□ -0.58
CLCC1-202ENST00000348264 HOPXQ9BPY8 73 aaPredicted RBP11.45□□□□□ -0.58
CLCC1-202ENST00000348264 ELAC2Q9BQ52 826 aaKnown RBP11.45□□□□□ -0.58
CLCC1-202ENST00000348264 RAB1BQ9H0U4 201 aa11.45□□□□□ -0.58
CLCC1-202ENST00000348264 MYLK2Q9H1R3 596 aa11.45□□□□□ -0.58
CLCC1-202ENST00000348264 MYOZ1Q9NP98 299 aaPredicted RBP11.45□□□□□ -0.58
CLCC1-202ENST00000348264 FBXL3Q9UKT7 428 aa11.45□□□□□ -0.58
CLCC1-202ENST00000348264 HIF3AQ9Y2N7 669 aa11.45□□□□□ -0.58
CLCC1-202ENST00000348264 CMAHPQ9Y471 501 aa11.45□□□□□ -0.58
CLCC1-202ENST00000348264 TRAV27A0A087WT01 109 aa11.44□□□□□ -0.58
CLCC1-202ENST00000348264 IGKV1D-43A0A0B4J1Z2 117 aa11.44□□□□□ -0.58
CLCC1-202ENST00000348264 IGHV4-61A0A0C4DH41 118 aa11.44□□□□□ -0.58
CLCC1-202ENST00000348264 LOC390937A0A1W2PQ73 354 aa11.44□□□□□ -0.58
CLCC1-202ENST00000348264 NPIPB13A6NJU9 1138 aa11.44□□□□□ -0.58
CLCC1-202ENST00000348264 VSTM5A8MXK1 200 aa11.44□□□□□ -0.58
CLCC1-202ENST00000348264 CENPBD1B2RD01 187 aa11.44□□□□□ -0.58
CLCC1-202ENST00000348264 NPIPB4C9JG80 1138 aa11.44□□□□□ -0.58
CLCC1-202ENST00000348264 GSTA4O15217 222 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms