RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 NPIPA1Q9UND3 350 aa9.62□□□□□ -0.87
CUL4A-201ENST00000326335 PCDHGB2Q9Y5G2 931 aa9.62□□□□□ -0.87
CUL4A-201ENST00000326335 IGKV1D-43A0A0B4J1Z2 117 aa9.61□□□□□ -0.87
CUL4A-201ENST00000326335 HTR3EA5X5Y0 456 aa9.61□□□□□ -0.87
CUL4A-201ENST00000326335 FAM172BPA6NC97 362 aa9.61□□□□□ -0.87
CUL4A-201ENST00000326335 GMDSO60547 372 aa9.61□□□□□ -0.87
CUL4A-201ENST00000326335 ARSBP15848 533 aa9.61□□□□□ -0.87
CUL4A-201ENST00000326335 DCTDP32321 178 aa9.61□□□□□ -0.87
CUL4A-201ENST00000326335 TMEM176BQ3YBM2 270 aaPredicted RBP9.61□□□□□ -0.87
CUL4A-201ENST00000326335 TMEM225Q6GV28 225 aa9.61□□□□□ -0.87
CUL4A-201ENST00000326335 TMEM205Q6UW68 189 aa9.61□□□□□ -0.87
CUL4A-201ENST00000326335 OR5D18Q8NGL1 313 aa9.61□□□□□ -0.87
CUL4A-201ENST00000326335 MED28Q9H204 178 aa9.61□□□□□ -0.87
CUL4A-201ENST00000326335 RBFOX1Q9NWB1 397 aaKnown RBP9.61□□□□□ -0.87
CUL4A-201ENST00000326335 FARSAQ9Y285 508 aaKnown RBP9.61□□□□□ -0.87
CUL4A-201ENST00000326335 FREM1Q5H8C1 2179 aa9.61□□□□□ -0.87
CUL4A-201ENST00000326335 RAMP1O60894 148 aa9.61□□□□□ -0.87
CUL4A-201ENST00000326335 PNPP00491 289 aa9.61□□□□□ -0.87
CUL4A-201ENST00000326335 PNMTP11086 282 aa9.61□□□□□ -0.87
CUL4A-201ENST00000326335 ZNF823P16415 610 aa9.61□□□□□ -0.87
CUL4A-201ENST00000326335 MAGEA8P43361 318 aa9.61□□□□□ -0.87
CUL4A-201ENST00000326335 EFNB2P52799 333 aa9.61□□□□□ -0.87
CUL4A-201ENST00000326335 BIDP55957 195 aa9.61□□□□□ -0.87
CUL4A-201ENST00000326335 CDC20Q12834 499 aa9.61□□□□□ -0.87
CUL4A-201ENST00000326335 MAMSTRQ6ZN01 415 aa9.61□□□□□ -0.87
CUL4A-201ENST00000326335 MAMDC2Q7Z304 686 aaPredicted RBP9.61□□□□□ -0.87
CUL4A-201ENST00000326335 PPP1R3BQ86XI6 285 aa9.61□□□□□ -0.87
CUL4A-201ENST00000326335 ADGRG3Q86Y34 549 aa9.61□□□□□ -0.87
CUL4A-201ENST00000326335 OR1F2PQ96R84 312 aa9.61□□□□□ -0.87
CUL4A-201ENST00000326335 CMKLR1Q99788 373 aa9.61□□□□□ -0.87
CUL4A-201ENST00000326335 TAS2R5Q9NYW4 299 aa9.61□□□□□ -0.87
CUL4A-201ENST00000326335 MED13Q9UHV7 2174 aa9.61□□□□□ -0.87
CUL4A-201ENST00000326335 SPTAN1Q13813 2472 aaKnown RBP9.61□□□□□ -0.87
CUL4A-201ENST00000326335 TCRBV16S1A1N1A0A5B0 115 aa9.61□□□□□ -0.87
CUL4A-201ENST00000326335 ZNF879B4DU55 563 aa9.61□□□□□ -0.87
CUL4A-201ENST00000326335 IGHV3-9P01782 118 aa9.61□□□□□ -0.87
CUL4A-201ENST00000326335 HOXD12P35452 270 aa9.61□□□□□ -0.87
CUL4A-201ENST00000326335 MTNR1BP49286 362 aa9.61□□□□□ -0.87
CUL4A-201ENST00000326335 AP2S1P53680 142 aaPredicted RBP9.61□□□□□ -0.87
CUL4A-201ENST00000326335 ACTA2P62736 377 aa9.61□□□□□ -0.87
CUL4A-201ENST00000326335 ACTG2P63267 376 aa9.61□□□□□ -0.87
CUL4A-201ENST00000326335 MFGE8Q08431 387 aaPredicted RBP9.61□□□□□ -0.87
CUL4A-201ENST00000326335 LINC01590Q5TEZ4 76 aa9.61□□□□□ -0.87
CUL4A-201ENST00000326335 EEF1A1P5Q5VTE0 462 aa9.61□□□□□ -0.87
CUL4A-201ENST00000326335 CD200R1LQ6Q8B3 271 aa9.61□□□□□ -0.87
CUL4A-201ENST00000326335 DCXRQ7Z4W1 244 aa9.61□□□□□ -0.87
CUL4A-201ENST00000326335 LRRC18Q8N456 261 aa9.61□□□□□ -0.87
CUL4A-201ENST00000326335 OR51A2Q8NGJ7 313 aa9.61□□□□□ -0.87
CUL4A-201ENST00000326335 UBL7Q96S82 380 aaPredicted RBP9.61□□□□□ -0.87
CUL4A-201ENST00000326335 SEC22CQ9BRL7 303 aa9.61□□□□□ -0.87
CUL4A-201ENST00000326335 CACNG2Q9Y698 323 aa9.61□□□□□ -0.87
CUL4A-201ENST00000326335 TRAV18A0A075B6X5 111 aa9.6□□□□□ -0.87
CUL4A-201ENST00000326335 J3QRE1 110 aa9.6□□□□□ -0.87
CUL4A-201ENST00000326335 P2RY10O00398 339 aa9.6□□□□□ -0.87
CUL4A-201ENST00000326335 ORC5O43913 435 aa9.6□□□□□ -0.87
CUL4A-201ENST00000326335 SLC43A1O75387 559 aa9.6□□□□□ -0.87
CUL4A-201ENST00000326335 SIX6O95475 246 aa9.6□□□□□ -0.87
CUL4A-201ENST00000326335 GIMD1P0DJR0 217 aa9.6□□□□□ -0.87
CUL4A-201ENST00000326335 CXCL3P19876 107 aa9.6□□□□□ -0.87
CUL4A-201ENST00000326335 NPR2P20594 1047 aa9.6□□□□□ -0.87
CUL4A-201ENST00000326335 GDNFP39905 211 aa9.6□□□□□ -0.87
CUL4A-201ENST00000326335 VEGFCP49767 419 aa9.6□□□□□ -0.87
CUL4A-201ENST00000326335 NKPD1Q17RQ9 610 aa9.6□□□□□ -0.87
CUL4A-201ENST00000326335 TMEM255AQ5JRV8 349 aa9.6□□□□□ -0.87
CUL4A-201ENST00000326335 CHMP1BQ7LBR1 199 aa9.6□□□□□ -0.87
CUL4A-201ENST00000326335 TMED4Q7Z7H5 227 aa9.6□□□□□ -0.87
CUL4A-201ENST00000326335 FAM219AQ8IW50 185 aa9.6□□□□□ -0.87
CUL4A-201ENST00000326335 MS4A15Q8N5U1 240 aa9.6□□□□□ -0.87
CUL4A-201ENST00000326335 CHST4Q8NCG5 386 aa9.6□□□□□ -0.87
CUL4A-201ENST00000326335 OR14A16Q8NHC5 309 aa9.6□□□□□ -0.87
CUL4A-201ENST00000326335 KLHL9Q9P2J3 617 aa9.6□□□□□ -0.87
CUL4A-201ENST00000326335 POLHQ9Y253 713 aa9.6□□□□□ -0.87
CUL4A-201ENST00000326335 ZNF281Q9Y2X9 895 aa9.6□□□□□ -0.87
CUL4A-201ENST00000326335 DMXL2Q8TDJ6 3036 aa9.6□□□□□ -0.87
CUL4A-201ENST00000326335 A0A0A6YYJ9 748 aa9.6□□□□□ -0.87
CUL4A-201ENST00000326335 MEN1O00255 615 aa9.6□□□□□ -0.87
CUL4A-201ENST00000326335 IGKV3-11P04433 115 aa9.6□□□□□ -0.87
CUL4A-201ENST00000326335 CALCBP10092 127 aa9.6□□□□□ -0.87
CUL4A-201ENST00000326335 RBM34P42696 430 aaKnown RBP9.6□□□□□ -0.87
CUL4A-201ENST00000326335 CAPZA2P47755 286 aa9.6□□□□□ -0.87
CUL4A-201ENST00000326335 RAB15P59190 212 aa9.6□□□□□ -0.87
CUL4A-201ENST00000326335 RPS11P62280 158 aaKnown RBP eCLIP9.6□□□□□ -0.87
CUL4A-201ENST00000326335 IFITM2Q01629 132 aa9.6□□□□□ -0.87
CUL4A-201ENST00000326335 CBFBQ13951 182 aa9.6□□□□□ -0.87
CUL4A-201ENST00000326335 WDR38Q5JTN6 314 aa9.6□□□□□ -0.87
CUL4A-201ENST00000326335 C9orf135Q5VTT2 229 aa9.6□□□□□ -0.87
CUL4A-201ENST00000326335 LRRC28Q86X40 367 aaPredicted RBP9.6□□□□□ -0.87
CUL4A-201ENST00000326335 OR52B4Q8NGK2 314 aa9.6□□□□□ -0.87
CUL4A-201ENST00000326335 ZNF426Q9BUY5 554 aa9.6□□□□□ -0.87
CUL4A-201ENST00000326335 COMMD4Q9H0A8 199 aa9.6□□□□□ -0.87
CUL4A-201ENST00000326335 SLITRK2Q9H156 845 aa9.6□□□□□ -0.87
CUL4A-201ENST00000326335 SPATA2Q9UM82 520 aa9.6□□□□□ -0.87
CUL4A-201ENST00000326335 PCDHGB7Q9Y5F8 929 aa9.6□□□□□ -0.87
CUL4A-201ENST00000326335 IGHV5-10-1A0A0J9YXX1 117 aa9.6□□□□□ -0.87
CUL4A-201ENST00000326335 FRG2CA6NGY1 282 aa9.6□□□□□ -0.87
CUL4A-201ENST00000326335 NOTOA8MTQ0 251 aa9.6□□□□□ -0.87
CUL4A-201ENST00000326335 THBS2P35442 1172 aa9.6□□□□□ -0.87
CUL4A-201ENST00000326335 ASAH1Q13510 395 aa9.6□□□□□ -0.87
CUL4A-201ENST00000326335 Q5BKY6 102 aa9.6□□□□□ -0.87
CUL4A-201ENST00000326335 RAET1LQ5VY80 246 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms