RNA–Protein interactions for RNA: ENST00000321253.6

TUBA3D-201, Transcript of tubulin alpha 3d, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3D, Length 1,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-201ENST00000321253 ZNF701Q9NV72 531 aaPredicted RBP12.77□□□□□ -0.37
TUBA3D-201ENST00000321253 PRPF19Q9UMS4 504 aaKnown RBP12.77□□□□□ -0.37
TUBA3D-201ENST00000321253 USF3Q68DE3 2245 aa12.76□□□□□ -0.37
TUBA3D-201ENST00000321253 UBL3O95164 117 aa12.76□□□□□ -0.37
TUBA3D-201ENST00000321253 GADD45GO95257 159 aa12.76□□□□□ -0.37
TUBA3D-201ENST00000321253 FARS2O95363 451 aaKnown RBP12.76□□□□□ -0.37
TUBA3D-201ENST00000321253 IGLV1-44P01699 117 aa12.76□□□□□ -0.37
TUBA3D-201ENST00000321253 SEMG1P04279 462 aa12.76□□□□□ -0.37
TUBA3D-201ENST00000321253 T-ENOLP0DO92 83 aa12.76□□□□□ -0.37
TUBA3D-201ENST00000321253 PAX1P15863 534 aa12.76□□□□□ -0.37
TUBA3D-201ENST00000321253 TTKP33981 857 aa12.76□□□□□ -0.37
TUBA3D-201ENST00000321253 RPL4P36578 427 aaKnown RBP12.76□□□□□ -0.37
TUBA3D-201ENST00000321253 RPL27P61353 136 aaKnown RBP12.76□□□□□ -0.37
TUBA3D-201ENST00000321253 MYBPC1Q00872 1141 aa12.76□□□□□ -0.37
TUBA3D-201ENST00000321253 NAAAQ02083 359 aa12.76□□□□□ -0.37
TUBA3D-201ENST00000321253 CD47Q08722 323 aa12.76□□□□□ -0.37
TUBA3D-201ENST00000321253 MTX3Q5HYI7 312 aa12.76□□□□□ -0.37
TUBA3D-201ENST00000321253 FAM205BPQ63HN1 556 aa12.76□□□□□ -0.37
TUBA3D-201ENST00000321253 LRFN4Q6PJG9 635 aa12.76□□□□□ -0.37
TUBA3D-201ENST00000321253 YTHDF3Q7Z739 585 aaKnown RBP12.76□□□□□ -0.37
TUBA3D-201ENST00000321253 DTX2Q86UW9 622 aa12.76□□□□□ -0.37
TUBA3D-201ENST00000321253 IGFN1Q86VF2 1251 aa12.76□□□□□ -0.37
TUBA3D-201ENST00000321253 MUC15Q8N387 334 aa12.76□□□□□ -0.37
TUBA3D-201ENST00000321253 MCHR2Q969V1 340 aa12.76□□□□□ -0.37
TUBA3D-201ENST00000321253 DHRS1Q96LJ7 313 aa12.76□□□□□ -0.37
TUBA3D-201ENST00000321253 TNFRSF13CQ96RJ3 184 aa12.76□□□□□ -0.37
TUBA3D-201ENST00000321253 TRAF4Q9BUZ4 470 aaPredicted RBP12.76□□□□□ -0.37
TUBA3D-201ENST00000321253 MRPL13Q9BYD1 178 aaKnown RBP12.76□□□□□ -0.37
TUBA3D-201ENST00000321253 AURKCQ9UQB9 309 aa12.76□□□□□ -0.37
TUBA3D-201ENST00000321253 MED13LQ71F56 2210 aa12.75□□□□□ -0.37
TUBA3D-201ENST00000321253 TRBV4-1A0A0J9YWV2 114 aa12.75□□□□□ -0.37
TUBA3D-201ENST00000321253 ZNF503-AS2A6NEH8 195 aa12.75□□□□□ -0.37
TUBA3D-201ENST00000321253 OVOL3O00110 214 aa12.75□□□□□ -0.37
TUBA3D-201ENST00000321253 CDC42EP2O14613 210 aa12.75□□□□□ -0.37
TUBA3D-201ENST00000321253 PDE5AO76074 875 aa12.75□□□□□ -0.37
TUBA3D-201ENST00000321253 STAMBPO95630 424 aa12.75□□□□□ -0.37
TUBA3D-201ENST00000321253 RAB36O95755 333 aa12.75□□□□□ -0.37
TUBA3D-201ENST00000321253 IGHMP01871 453 aa12.75□□□□□ -0.37
TUBA3D-201ENST00000321253 CELA3BP08861 270 aa12.75□□□□□ -0.37
TUBA3D-201ENST00000321253 OR8G3PP0DMU2 310 aa12.75□□□□□ -0.37
TUBA3D-201ENST00000321253 ATP6V1B2P21281 511 aa12.75□□□□□ -0.37
TUBA3D-201ENST00000321253 CDKN1AP38936 164 aa12.75□□□□□ -0.37
TUBA3D-201ENST00000321253 PIGFQ07326 219 aa12.75□□□□□ -0.37
TUBA3D-201ENST00000321253 HIST3H3Q16695 136 aa12.75□□□□□ -0.37
TUBA3D-201ENST00000321253 ZBED5Q49AG3 693 aa12.75□□□□□ -0.37
TUBA3D-201ENST00000321253 PRSS57Q6UWY2 283 aa12.75□□□□□ -0.37
TUBA3D-201ENST00000321253 DHFR2Q86XF0 187 aa12.75□□□□□ -0.37
TUBA3D-201ENST00000321253 KRTAP1-3Q8IUG1 177 aa12.75□□□□□ -0.37
TUBA3D-201ENST00000321253 ZDHHC21Q8IVQ6 265 aa12.75□□□□□ -0.37
TUBA3D-201ENST00000321253 SLC22A24Q8N4F4 322 aa12.75□□□□□ -0.37
TUBA3D-201ENST00000321253 OR4K5Q8NGD3 323 aa12.75□□□□□ -0.37
TUBA3D-201ENST00000321253 SEPHS2Q99611 448 aa12.75□□□□□ -0.37
TUBA3D-201ENST00000321253 TMUB1Q9BVT8 246 aa12.75□□□□□ -0.37
TUBA3D-201ENST00000321253 GRIP2Q9C0E4 1043 aa12.75□□□□□ -0.37
TUBA3D-201ENST00000321253 C1orf21Q9H246 121 aa12.75□□□□□ -0.37
TUBA3D-201ENST00000321253 DENND2DQ9H6A0 471 aaPredicted RBP12.75□□□□□ -0.37
TUBA3D-201ENST00000321253 IL1RAPQ9NPH3 570 aa12.75□□□□□ -0.37
TUBA3D-201ENST00000321253 CBLN4Q9NTU7 201 aa12.75□□□□□ -0.37
TUBA3D-201ENST00000321253 TMEM38BQ9NVV0 291 aa12.75□□□□□ -0.37
TUBA3D-201ENST00000321253 ZNF346Q9UL40 294 aaKnown RBP12.75□□□□□ -0.37
TUBA3D-201ENST00000321253 A6NIZ1 184 aa12.74□□□□□ -0.37
TUBA3D-201ENST00000321253 BMP4P12644 408 aa12.74□□□□□ -0.37
TUBA3D-201ENST00000321253 APOBEC3AP31941 199 aaPredicted RBP12.74□□□□□ -0.37
TUBA3D-201ENST00000321253 ACVR1BP36896 505 aa12.74□□□□□ -0.37
TUBA3D-201ENST00000321253 PTDSS1P48651 473 aaKnown RBP12.74□□□□□ -0.37
TUBA3D-201ENST00000321253 RAP1BP61224 184 aa12.74□□□□□ -0.37
TUBA3D-201ENST00000321253 RAP1AP62834 184 aa12.74□□□□□ -0.37
TUBA3D-201ENST00000321253 TRIM25Q14258 630 aaKnown RBP12.74□□□□□ -0.37
TUBA3D-201ENST00000321253 SEC23BQ15437 767 aa12.74□□□□□ -0.37
TUBA3D-201ENST00000321253 IQCCQ4KMZ1 466 aa12.74□□□□□ -0.37
TUBA3D-201ENST00000321253 LRRC75AQ8NAA5 344 aa12.74□□□□□ -0.37
TUBA3D-201ENST00000321253 IL17RDQ8NFM7 739 aa12.74□□□□□ -0.37
TUBA3D-201ENST00000321253 OR4F15Q8NGB8 312 aa12.74□□□□□ -0.37
TUBA3D-201ENST00000321253 FNDC8Q8TC99 324 aa12.74□□□□□ -0.37
TUBA3D-201ENST00000321253 HDAC2Q92769 488 aaKnown RBP12.74□□□□□ -0.37
TUBA3D-201ENST00000321253 RBP7Q96R05 134 aa12.74□□□□□ -0.37
TUBA3D-201ENST00000321253 ALG12Q9BV10 488 aa12.74□□□□□ -0.37
TUBA3D-201ENST00000321253 SEC61A2Q9H9S3 476 aa12.74□□□□□ -0.37
TUBA3D-201ENST00000321253 SMURF2Q9HAU4 748 aa12.74□□□□□ -0.37
TUBA3D-201ENST00000321253 B3GNT2Q9NY97 397 aa12.74□□□□□ -0.37
TUBA3D-201ENST00000321253 TAS2R1Q9NYW7 299 aa12.74□□□□□ -0.37
TUBA3D-201ENST00000321253 FBXL3Q9UKT7 428 aa12.74□□□□□ -0.37
TUBA3D-201ENST00000321253 TMCC3Q9ULS5 477 aa12.74□□□□□ -0.37
TUBA3D-201ENST00000321253 SH3PXD2BA1X283 911 aa12.73□□□□□ -0.37
TUBA3D-201ENST00000321253 NDUFB2O95178 105 aa12.73□□□□□ -0.37
TUBA3D-201ENST00000321253 CD8AP01732 235 aa12.73□□□□□ -0.37
TUBA3D-201ENST00000321253 RRM2P31350 389 aa12.73□□□□□ -0.37
TUBA3D-201ENST00000321253 OMPP47874 163 aa12.73□□□□□ -0.37
TUBA3D-201ENST00000321253 LIMS1P48059 325 aa12.73□□□□□ -0.37
TUBA3D-201ENST00000321253 GIPRP48546 466 aa12.73□□□□□ -0.37
TUBA3D-201ENST00000321253 RAB1AP62820 205 aa12.73□□□□□ -0.37
TUBA3D-201ENST00000321253 ERVK-25P63136 954 aa12.73□□□□□ -0.37
TUBA3D-201ENST00000321253 CHRNB3Q05901 458 aa12.73□□□□□ -0.37
TUBA3D-201ENST00000321253 FHL1Q13642 323 aa12.73□□□□□ -0.37
TUBA3D-201ENST00000321253 NRN1LQ496H8 165 aa12.73□□□□□ -0.37
TUBA3D-201ENST00000321253 C10orf128Q5T292 105 aa12.73□□□□□ -0.37
TUBA3D-201ENST00000321253 LCN8Q6JVE9 175 aa12.73□□□□□ -0.37
TUBA3D-201ENST00000321253 DPPA2Q7Z7J5 298 aa12.73□□□□□ -0.37
TUBA3D-201ENST00000321253 MYPOPQ86VE0 399 aaPredicted RBP12.73□□□□□ -0.37
TUBA3D-201ENST00000321253 SKA3Q8IX90 412 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms