RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 MYDGFQ969H8 173 aa3.68□□□□□ -1.82
CKS1BP1-201ENST00000555221 CYYR1Q96J86 154 aa3.68□□□□□ -1.82
CKS1BP1-201ENST00000555221 HSFY1Q96LI6 401 aa3.68□□□□□ -1.82
CKS1BP1-201ENST00000555221 KCTD14Q9BQ13 255 aaPredicted RBP3.68□□□□□ -1.82
CKS1BP1-201ENST00000555221 DEFB127Q9H1M4 99 aa3.68□□□□□ -1.82
CKS1BP1-201ENST00000555221 SRMSQ9H3Y6 488 aa3.68□□□□□ -1.82
CKS1BP1-201ENST00000555221 NMRK1Q9NWW6 199 aa3.68□□□□□ -1.82
CKS1BP1-201ENST00000555221 CALYQ9NYX4 217 aa3.68□□□□□ -1.82
CKS1BP1-201ENST00000555221 HFM1A2PYH4 1435 aa3.68□□□□□ -1.82
CKS1BP1-201ENST00000555221 SETD5Q9C0A6 1442 aa3.68□□□□□ -1.82
CKS1BP1-201ENST00000555221 ADGBQ8N7X0 1667 aa3.68□□□□□ -1.82
CKS1BP1-201ENST00000555221 CEP350Q5VT06 3117 aa3.68□□□□□ -1.82
CKS1BP1-201ENST00000555221 MAST1Q9Y2H9 1570 aa3.68□□□□□ -1.82
CKS1BP1-201ENST00000555221 PHF3Q92576 2039 aaKnown RBP3.67□□□□□ -1.82
CKS1BP1-201ENST00000555221 A0A0G2JN53 185 aa3.67□□□□□ -1.82
CKS1BP1-201ENST00000555221 DYNC1I1O14576 645 aa3.67□□□□□ -1.82
CKS1BP1-201ENST00000555221 ZNF861PO60384 105 aa3.67□□□□□ -1.82
CKS1BP1-201ENST00000555221 WBP4O75554 376 aaKnown RBP3.67□□□□□ -1.82
CKS1BP1-201ENST00000555221 UPK3AO75631 287 aa3.67□□□□□ -1.82
CKS1BP1-201ENST00000555221 C1orf105O95561 183 aa3.67□□□□□ -1.82
CKS1BP1-201ENST00000555221 KRT6AP02538 564 aa3.67□□□□□ -1.82
CKS1BP1-201ENST00000555221 KITLGP21583 273 aa3.67□□□□□ -1.82
CKS1BP1-201ENST00000555221 IFNA8P32881 189 aa3.67□□□□□ -1.82
CKS1BP1-201ENST00000555221 ACVR1Q04771 509 aa3.67□□□□□ -1.82
CKS1BP1-201ENST00000555221 PDIA2Q13087 525 aaKnown RBP3.67□□□□□ -1.82
CKS1BP1-201ENST00000555221 PPIL2Q13356 520 aa3.67□□□□□ -1.82
CKS1BP1-201ENST00000555221 CTRB2Q6GPI1 263 aa3.67□□□□□ -1.82
CKS1BP1-201ENST00000555221 TRIM40Q6P9F5 258 aa3.67□□□□□ -1.82
CKS1BP1-201ENST00000555221 TMEM107Q6UX40 140 aa3.67□□□□□ -1.82
CKS1BP1-201ENST00000555221 FAM71E2Q8N5Q1 922 aa3.67□□□□□ -1.82
CKS1BP1-201ENST00000555221 OR10G9Q8NGN4 311 aa3.67□□□□□ -1.82
CKS1BP1-201ENST00000555221 OR1N2Q8NGR9 330 aa3.67□□□□□ -1.82
CKS1BP1-201ENST00000555221 RASD2Q96D21 266 aa3.67□□□□□ -1.82
CKS1BP1-201ENST00000555221 SH3GL1Q99961 368 aa3.67□□□□□ -1.82
CKS1BP1-201ENST00000555221 CCDC77Q9BR77 488 aa3.67□□□□□ -1.82
CKS1BP1-201ENST00000555221 ZFP14Q9HCL3 533 aa3.67□□□□□ -1.82
CKS1BP1-201ENST00000555221 ADAP2Q9NPF8 381 aa3.67□□□□□ -1.82
CKS1BP1-201ENST00000555221 CLCF1Q9UBD9 225 aa3.67□□□□□ -1.82
CKS1BP1-201ENST00000555221 ZNF225Q9UK10 706 aa3.67□□□□□ -1.82
CKS1BP1-201ENST00000555221 CDHR2Q9BYE9 1310 aa3.67□□□□□ -1.82
CKS1BP1-201ENST00000555221 PZPP20742 1482 aa3.67□□□□□ -1.82
CKS1BP1-201ENST00000555221 KIDINS220Q9ULH0 1771 aa3.66□□□□□ -1.82
CKS1BP1-201ENST00000555221 KDM5DQ9BY66 1539 aa3.66□□□□□ -1.82
CKS1BP1-201ENST00000555221 WI2-2373I1.2A0A1W2PRP0 233 aa3.66□□□□□ -1.82
CKS1BP1-201ENST00000555221 PINLYPA6NC86 204 aa3.66□□□□□ -1.82
CKS1BP1-201ENST00000555221 ZNF716A6NP11 495 aa3.66□□□□□ -1.82
CKS1BP1-201ENST00000555221 CCL21O00585 134 aa3.66□□□□□ -1.82
CKS1BP1-201ENST00000555221 SLC31A2O15432 143 aa3.66□□□□□ -1.82
CKS1BP1-201ENST00000555221 IGHV2-5P01817 119 aa3.66□□□□□ -1.82
CKS1BP1-201ENST00000555221 SERPIND1P05546 499 aa3.66□□□□□ -1.82
CKS1BP1-201ENST00000555221 ZNF735P0CB33 412 aa3.66□□□□□ -1.82
CKS1BP1-201ENST00000555221 TROVE2P10155 538 aaKnown RBP eCLIP3.66□□□□□ -1.82
CKS1BP1-201ENST00000555221 NR2C1P13056 603 aa3.66□□□□□ -1.82
CKS1BP1-201ENST00000555221 CRISP2P16562 243 aa3.66□□□□□ -1.82
CKS1BP1-201ENST00000555221 ZNF17P17021 662 aa3.66□□□□□ -1.82
CKS1BP1-201ENST00000555221 TNNI1P19237 187 aa3.66□□□□□ -1.82
CKS1BP1-201ENST00000555221 CCNE1P24864 410 aa3.66□□□□□ -1.82
CKS1BP1-201ENST00000555221 ATP5C1P36542 298 aaKnown RBP3.66□□□□□ -1.82
CKS1BP1-201ENST00000555221 NUDT1P36639 197 aa3.66□□□□□ -1.82
CKS1BP1-201ENST00000555221 CSNK1DP48730 415 aa3.66□□□□□ -1.82
CKS1BP1-201ENST00000555221 UGT2B15P54855 530 aa3.66□□□□□ -1.82
CKS1BP1-201ENST00000555221 FBXW4P57775 412 aa3.66□□□□□ -1.82
CKS1BP1-201ENST00000555221 KIAA0087Q14695 138 aa3.66□□□□□ -1.82
CKS1BP1-201ENST00000555221 LRRC10Q5BKY1 277 aa3.66□□□□□ -1.82
CKS1BP1-201ENST00000555221 RNASEKQ6P5S7 137 aaKnown RBP3.66□□□□□ -1.82
CKS1BP1-201ENST00000555221 ACP7Q6ZNF0 438 aa3.66□□□□□ -1.82
CKS1BP1-201ENST00000555221 SLC25A48Q6ZT89 311 aaKnown RBP3.66□□□□□ -1.82
CKS1BP1-201ENST00000555221 TMEM61Q8N0U2 210 aa3.66□□□□□ -1.82
CKS1BP1-201ENST00000555221 SPATA4Q8NEY3 305 aa3.66□□□□□ -1.82
CKS1BP1-201ENST00000555221 OR56B2PQ8NGI1 322 aa3.66□□□□□ -1.82
CKS1BP1-201ENST00000555221 OR6X1Q8NH79 312 aa3.66□□□□□ -1.82
CKS1BP1-201ENST00000555221 RNF139Q8WU17 664 aa3.66□□□□□ -1.82
CKS1BP1-201ENST00000555221 CNDP1Q96KN2 507 aa3.66□□□□□ -1.82
CKS1BP1-201ENST00000555221 HES7Q9BYE0 225 aa3.66□□□□□ -1.82
CKS1BP1-201ENST00000555221 NXF3Q9H4D5 531 aaKnown RBP3.66□□□□□ -1.82
CKS1BP1-201ENST00000555221 EML4Q9HC35 981 aaKnown RBP3.66□□□□□ -1.82
CKS1BP1-201ENST00000555221 TM9SF3Q9HD45 589 aa3.66□□□□□ -1.82
CKS1BP1-201ENST00000555221 CCL28Q9NRJ3 127 aa3.66□□□□□ -1.82
CKS1BP1-201ENST00000555221 ABCB10Q9NRK6 738 aa3.66□□□□□ -1.82
CKS1BP1-201ENST00000555221 PSMC3IPQ9P2W1 217 aaPredicted RBP3.66□□□□□ -1.82
CKS1BP1-201ENST00000555221 PTPRTO14522 1441 aa3.66□□□□□ -1.82
CKS1BP1-201ENST00000555221 PTPRKQ15262 1439 aa3.66□□□□□ -1.82
CKS1BP1-201ENST00000555221 PLXNC1O60486 1568 aa3.66□□□□□ -1.82
CKS1BP1-201ENST00000555221 DIP2CQ9Y2E4 1556 aa3.66□□□□□ -1.82
CKS1BP1-201ENST00000555221 BCORL1Q5H9F3 1711 aa3.66□□□□□ -1.82
CKS1BP1-201ENST00000555221 A2ML1A8K2U0 1454 aa3.66□□□□□ -1.82
CKS1BP1-201ENST00000555221 DNMT1P26358 1616 aaKnown RBP3.66□□□□□ -1.82
CKS1BP1-201ENST00000555221 ADAMTSL3P82987 1691 aa3.65□□□□□ -1.82
CKS1BP1-201ENST00000555221 FRMPD1Q5SYB0 1578 aa3.65□□□□□ -1.82
CKS1BP1-201ENST00000555221 INO80Q9ULG1 1556 aaPredicted RBP3.65□□□□□ -1.82
CKS1BP1-201ENST00000555221 NAIPQ13075 1403 aa3.65□□□□□ -1.83
CKS1BP1-201ENST00000555221 IGLV3-22A0A075B6J6 115 aa3.65□□□□□ -1.83
CKS1BP1-201ENST00000555221 A0A0G2JLM5 398 aa3.65□□□□□ -1.83
CKS1BP1-201ENST00000555221 A0A1B0GUA9 196 aa3.65□□□□□ -1.83
CKS1BP1-201ENST00000555221 HEATR9A2RTY3 570 aa3.65□□□□□ -1.83
CKS1BP1-201ENST00000555221 GOLGA8OA6NCC3 632 aa3.65□□□□□ -1.83
CKS1BP1-201ENST00000555221 GOLGA8NF8WBI6 632 aa3.65□□□□□ -1.83
CKS1BP1-201ENST00000555221 HMMRO75330 724 aa3.65□□□□□ -1.83
CKS1BP1-201ENST00000555221 CST1P01037 141 aa3.65□□□□□ -1.83
CKS1BP1-201ENST00000555221 TDGF1P13385 188 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms