RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 CCDC188H7C350 402 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 LSM1O15116 133 aaKnown RBP2.67□□□□□ -1.98
SLIRP-202ENST00000553981 FRS3O43559 492 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 TBX19O60806 448 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 SCN2BO60939 215 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 COQ9O75208 318 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 RP2O75695 350 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 C6orf47O95873 294 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 LGI1O95970 557 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 OTCP00480 354 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 IGLV1-44P01699 117 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 CHRNGP07510 517 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 GSTA2P09210 222 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 IFI6P09912 130 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 OR4A8P0C604 315 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 DHRS4L1P0CG22 281 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 HSD3B1P14060 373 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 TCP1P17987 556 aaKnown RBP2.67□□□□□ -1.98
SLIRP-202ENST00000553981 TCN1P20061 433 aaPredicted RBP2.67□□□□□ -1.98
SLIRP-202ENST00000553981 CCNA2P20248 432 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 IMPDH1P20839 514 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 PRPH2P23942 346 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 PTAFRP25105 342 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 ELK4P28324 431 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 DUSP1P28562 367 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 MPIP34949 423 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 KRT20P35900 424 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 ARL1P40616 181 aaPredicted RBP2.67□□□□□ -1.98
SLIRP-202ENST00000553981 ENTPD1P49961 510 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 SERPINB8P50452 374 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 PRKAA2P54646 552 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 ATP12AP54707 1039 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 DVL1P1P54792 670 aaPredicted RBP2.67□□□□□ -1.98
SLIRP-202ENST00000553981 DSCR9P59020 149 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 HILS1P60008 231 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 ERVS71-1P61550 626 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 RPL36AP83881 106 aaKnown RBP2.67□□□□□ -1.98
SLIRP-202ENST00000553981 NAAAQ02083 359 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 ACSM2AQ08AH3 577 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 BNIP2Q12982 314 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 SELENBP1Q13228 472 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 SQLEQ14534 574 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 SLC17A1Q14916 467 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 HEPACAMQ14CZ8 416 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 MAD2L1BPQ15013 274 aaPredicted RBP2.67□□□□□ -1.98
SLIRP-202ENST00000553981 PDK3Q15120 406 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 RNPS1Q15287 305 aaKnown RBP2.67□□□□□ -1.98
SLIRP-202ENST00000553981 CNN3Q15417 329 aaKnown RBP2.67□□□□□ -1.98
SLIRP-202ENST00000553981 EFNB3Q15768 340 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 FAM83EQ2M2I3 478 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 UGT3A2Q3SY77 523 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 TBRG1Q3YBR2 411 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 ARL13AQ5H913 290 aaPredicted RBP2.67□□□□□ -1.98
SLIRP-202ENST00000553981 KLF17Q5JT82 389 aaPredicted RBP2.67□□□□□ -1.98
SLIRP-202ENST00000553981 TEX35Q5T0J7 233 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 DCST2Q5T1A1 773 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 PDZK1Q5T2W1 519 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 C6orf163Q5TEZ5 329 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 ASPHD1Q5U4P2 390 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 LIPMQ5VYY2 423 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 AP1ARQ63HQ0 302 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 ACSM2BQ68CK6 577 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 TYW3Q6IPR3 259 aaKnown RBP2.67□□□□□ -1.98
SLIRP-202ENST00000553981 METTL2BQ6P1Q9 378 aaKnown RBP2.67□□□□□ -1.98
SLIRP-202ENST00000553981 MZT2AQ6P582 158 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 NHLRC1Q6VVB1 395 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 GPRIN3Q6ZVF9 776 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 ZNF329Q86UD4 541 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 COMTD1Q86VU5 262 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 EPHX4Q8IUS5 362 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 CLECL1Q8IZS7 167 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 KDM8Q8N371 416 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 KRTCAP2Q8N6L1 136 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 TMEM99Q8N816 258 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 CDRT4Q8N9R6 151 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 FAM71CQ8NEG0 241 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 OR1K1Q8NGR3 316 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 OR5W2Q8NH69 310 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 OR5AK3PQ8NH89 298 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 PSMA8Q8TAA3 256 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 METTL6Q8TCB7 284 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 FAM216AQ8WUB2 273 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 CNOT9Q92600 299 aaKnown RBP2.67□□□□□ -1.98
SLIRP-202ENST00000553981 CDKL2Q92772 493 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 BCL2L2Q92843 193 aaPredicted RBP2.67□□□□□ -1.98
SLIRP-202ENST00000553981 EME1Q96AY2 570 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 L3HYPDHQ96EM0 354 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 DTNBP1Q96EV8 351 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 OR7D2Q96RA2 312 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 SDF2Q99470 211 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 PAFAH2Q99487 392 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 SLC6A7Q99884 636 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 MRPL57Q9BQC6 102 aaKnown RBP2.67□□□□□ -1.98
SLIRP-202ENST00000553981 WFDC6Q9BQY6 131 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 MRPL37Q9BZE1 423 aaKnown RBP2.67□□□□□ -1.98
SLIRP-202ENST00000553981 LAT2Q9GZY6 243 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 PIGUQ9H490 435 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 MID1IP1Q9NPA3 183 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 UBQLN4Q9NRR5 601 aa2.67□□□□□ -1.98
SLIRP-202ENST00000553981 CA10Q9NS85 328 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms