RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 CT45A2Q5DJT8 189 aa12.05□□□□□ -0.48
UBE3B-209ENST00000539584 NPSR1Q6W5P4 371 aa12.05□□□□□ -0.48
UBE3B-209ENST00000539584 DGAT2L6Q6ZPD8 337 aa12.05□□□□□ -0.48
UBE3B-209ENST00000539584 ZNF511Q8NB15 262 aa12.05□□□□□ -0.48
UBE3B-209ENST00000539584 ZDHHC1Q8WTX9 485 aa12.05□□□□□ -0.48
UBE3B-209ENST00000539584 TNFAIP8L1Q8WVP5 186 aa12.05□□□□□ -0.48
UBE3B-209ENST00000539584 TSACCQ96A04 125 aaPredicted RBP12.05□□□□□ -0.48
UBE3B-209ENST00000539584 DGAT2Q96PD7 388 aa12.05□□□□□ -0.48
UBE3B-209ENST00000539584 SEMA4CQ9C0C4 833 aa12.05□□□□□ -0.48
UBE3B-209ENST00000539584 SCPEP1Q9HB40 452 aa12.05□□□□□ -0.48
UBE3B-209ENST00000539584 CAPN10Q9HC96 672 aa12.05□□□□□ -0.48
UBE3B-209ENST00000539584 APMAPQ9HDC9 416 aa12.05□□□□□ -0.48
UBE3B-209ENST00000539584 MMP25Q9NPA2 562 aa12.05□□□□□ -0.48
UBE3B-209ENST00000539584 DZANK1Q9NVP4 752 aa12.05□□□□□ -0.48
UBE3B-209ENST00000539584 HRASLS2Q9NWW9 162 aa12.05□□□□□ -0.48
UBE3B-209ENST00000539584 OR10H1Q9Y4A9 318 aa12.05□□□□□ -0.48
UBE3B-209ENST00000539584 A0A0D9SG52 128 aa12.04□□□□□ -0.48
UBE3B-209ENST00000539584 LOC100289279A0A1B0GTE1 492 aa12.04□□□□□ -0.48
UBE3B-209ENST00000539584 GNB5O14775 395 aa12.04□□□□□ -0.48
UBE3B-209ENST00000539584 RDH16O75452 317 aa12.04□□□□□ -0.48
UBE3B-209ENST00000539584 UBBP0CG47 229 aa12.04□□□□□ -0.48
UBE3B-209ENST00000539584 UBCP0CG48 685 aaKnown RBP12.04□□□□□ -0.48
UBE3B-209ENST00000539584 AQP2P41181 271 aa12.04□□□□□ -0.48
UBE3B-209ENST00000539584 H2BFSP57053 126 aa12.04□□□□□ -0.48
UBE3B-209ENST00000539584 TAS2R19P59542 299 aa12.04□□□□□ -0.48
UBE3B-209ENST00000539584 RPS15P62841 145 aaKnown RBP12.04□□□□□ -0.48
UBE3B-209ENST00000539584 RPS27AP62979 156 aaKnown RBP12.04□□□□□ -0.48
UBE3B-209ENST00000539584 UBA52P62987 128 aaKnown RBP12.04□□□□□ -0.48
UBE3B-209ENST00000539584 CSRP2Q16527 193 aa12.04□□□□□ -0.48
UBE3B-209ENST00000539584 TMEM240Q5SV17 173 aa12.04□□□□□ -0.48
UBE3B-209ENST00000539584 IQCF2Q8IXL9 164 aa12.04□□□□□ -0.48
UBE3B-209ENST00000539584 ARHGEF39Q8N4T4 335 aa12.04□□□□□ -0.48
UBE3B-209ENST00000539584 BCORP1Q8N888 145 aa12.04□□□□□ -0.48
UBE3B-209ENST00000539584 LSM14AQ8ND56 463 aaKnown RBP12.04□□□□□ -0.48
UBE3B-209ENST00000539584 CCL4L1Q8NHW4 92 aa12.04□□□□□ -0.48
UBE3B-209ENST00000539584 ST8SIA4Q92187 359 aa12.04□□□□□ -0.48
UBE3B-209ENST00000539584 BMFQ96LC9 184 aa12.04□□□□□ -0.48
UBE3B-209ENST00000539584 CPNE7Q9UBL6 633 aa12.04□□□□□ -0.48
UBE3B-209ENST00000539584 IKZF2Q9UKS7 526 aa12.04□□□□□ -0.48
UBE3B-209ENST00000539584 GOLGA4Q13439 2230 aaKnown RBP12.04□□□□□ -0.48
UBE3B-209ENST00000539584 TRBV23OR9-2A0A075B6M9 112 aa12.04□□□□□ -0.48
UBE3B-209ENST00000539584 D6RAR5 112 aa12.04□□□□□ -0.48
UBE3B-209ENST00000539584 PSMD9O00233 223 aa12.04□□□□□ -0.48
UBE3B-209ENST00000539584 SLC17A2O00624 439 aa12.04□□□□□ -0.48
UBE3B-209ENST00000539584 TSPAN4O14817 238 aa12.04□□□□□ -0.48
UBE3B-209ENST00000539584 SDC3O75056 442 aa12.04□□□□□ -0.48
UBE3B-209ENST00000539584 RLN1P04808 185 aa12.04□□□□□ -0.48
UBE3B-209ENST00000539584 ITGB2P05107 769 aa12.04□□□□□ -0.48
UBE3B-209ENST00000539584 GTF2F2P13984 249 aa12.04□□□□□ -0.48
UBE3B-209ENST00000539584 MGMTP16455 207 aa12.04□□□□□ -0.48
UBE3B-209ENST00000539584 SOX2P48431 317 aa12.04□□□□□ -0.48
UBE3B-209ENST00000539584 LSSP48449 732 aa12.04□□□□□ -0.48
UBE3B-209ENST00000539584 CAPZA1P52907 286 aa12.04□□□□□ -0.48
UBE3B-209ENST00000539584 UBE2IP63279 158 aaKnown RBP12.04□□□□□ -0.48
UBE3B-209ENST00000539584 TMEM196Q5HYL7 178 aa12.04□□□□□ -0.48
UBE3B-209ENST00000539584 COL13A1Q5TAT6 717 aaPredicted RBP12.04□□□□□ -0.48
UBE3B-209ENST00000539584 EEF1A1P5Q5VTE0 462 aa12.04□□□□□ -0.48
UBE3B-209ENST00000539584 FAAP20Q6NZ36 180 aa12.04□□□□□ -0.48
UBE3B-209ENST00000539584 TMEM229BQ8NBD8 167 aa12.04□□□□□ -0.48
UBE3B-209ENST00000539584 CLEC1AQ8NC01 280 aa12.04□□□□□ -0.48
UBE3B-209ENST00000539584 OR4C3Q8NH37 302 aa12.04□□□□□ -0.48
UBE3B-209ENST00000539584 COQ8AQ8NI60 647 aa12.04□□□□□ -0.48
UBE3B-209ENST00000539584 HERVK_113Q902F9 699 aa12.04□□□□□ -0.48
UBE3B-209ENST00000539584 ELSPBP1Q96BH3 223 aa12.04□□□□□ -0.48
UBE3B-209ENST00000539584 INTS14Q96SY0 518 aa12.04□□□□□ -0.48
UBE3B-209ENST00000539584 SEMA6CQ9H3T2 930 aa12.04□□□□□ -0.48
UBE3B-209ENST00000539584 UBQLN4Q9NRR5 601 aa12.04□□□□□ -0.48
UBE3B-209ENST00000539584 FXYD6-FXYD2A0A087WZ82 144 aa12.03□□□□□ -0.48
UBE3B-209ENST00000539584 GOSR2O14653 212 aa12.03□□□□□ -0.48
UBE3B-209ENST00000539584 MAS1P04201 325 aa12.03□□□□□ -0.48
UBE3B-209ENST00000539584 IL32P24001 234 aa12.03□□□□□ -0.48
UBE3B-209ENST00000539584 SRSF4Q08170 494 aaKnown RBP12.03□□□□□ -0.48
UBE3B-209ENST00000539584 RAB11BQ15907 218 aa12.03□□□□□ -0.48
UBE3B-209ENST00000539584 STPG1Q5TH74 334 aa12.03□□□□□ -0.48
UBE3B-209ENST00000539584 FNDC7Q5VTL7 733 aa12.03□□□□□ -0.48
UBE3B-209ENST00000539584 STEAP1BQ6NZ63 245 aa12.03□□□□□ -0.48
UBE3B-209ENST00000539584 NHLRC1Q6VVB1 395 aa12.03□□□□□ -0.48
UBE3B-209ENST00000539584 MAMSTRQ6ZN01 415 aa12.03□□□□□ -0.48
UBE3B-209ENST00000539584 TAF8Q7Z7C8 310 aa12.03□□□□□ -0.48
UBE3B-209ENST00000539584 MUC20Q8N307 709 aaPredicted RBP12.03□□□□□ -0.48
UBE3B-209ENST00000539584 OR5M1Q8NGP8 315 aa12.03□□□□□ -0.48
UBE3B-209ENST00000539584 GPX8Q8TED1 209 aa12.03□□□□□ -0.48
UBE3B-209ENST00000539584 ARSGQ96EG1 525 aa12.03□□□□□ -0.48
UBE3B-209ENST00000539584 SPACA7Q96KW9 195 aa12.03□□□□□ -0.48
UBE3B-209ENST00000539584 C4orf45Q96LM5 186 aa12.03□□□□□ -0.48
UBE3B-209ENST00000539584 MFFQ9GZY8 342 aa12.03□□□□□ -0.48
UBE3B-209ENST00000539584 FXYD6Q9H0Q3 95 aa12.03□□□□□ -0.48
UBE3B-209ENST00000539584 FKRPQ9H9S5 495 aa12.03□□□□□ -0.48
UBE3B-209ENST00000539584 PRTFDC1Q9NRG1 225 aa12.03□□□□□ -0.48
UBE3B-209ENST00000539584 LRIT1Q9P2V4 623 aa12.03□□□□□ -0.48
UBE3B-209ENST00000539584 TRAV8-7A0A075B6U6 113 aa12.03□□□□□ -0.48
UBE3B-209ENST00000539584 GRXCR1A8MXD5 290 aa12.03□□□□□ -0.48
UBE3B-209ENST00000539584 HPP00738 406 aa12.03□□□□□ -0.48
UBE3B-209ENST00000539584 CD8AP01732 235 aa12.03□□□□□ -0.48
UBE3B-209ENST00000539584 LPLP06858 475 aa12.03□□□□□ -0.48
UBE3B-209ENST00000539584 CD37P11049 281 aa12.03□□□□□ -0.48
UBE3B-209ENST00000539584 ZNF35P13682 527 aa12.03□□□□□ -0.48
UBE3B-209ENST00000539584 PVRP15151 417 aa12.03□□□□□ -0.48
UBE3B-209ENST00000539584 HPGDP15428 266 aa12.03□□□□□ -0.48
UBE3B-209ENST00000539584 MPGP29372 298 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms