RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 RASGEF1BQ0VAM2 473 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 ASAH1Q13510 395 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 OR7A5Q15622 319 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 ZNF239Q16600 458 aaKnown RBP13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 LPAL2Q16609 132 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 HSD17B12Q53GQ0 312 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 PYDC2Q56P42 97 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 SFXN4Q6P4A7 337 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 CNIH2Q6PI25 160 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 ARSKQ6UWY0 536 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 RFLNBQ8N5W9 214 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 LIN37Q96GY3 246 aaPredicted RBP13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 NECAB3Q96P71 396 aaPredicted RBP13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 MESP1Q9BRJ9 268 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 ANGPTL4Q9BY76 406 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 SLITRK2Q9H156 845 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 PPP1R3EQ9H7J1 279 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 RHBDL2Q9NX52 303 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 MRM2Q9UI43 246 aaKnown RBP13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 NPIPA1Q9UND3 350 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 RPH3AQ9Y2J0 694 aaPredicted RBP13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 HDGFL3Q9Y3E1 203 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 GRIP1Q9Y3R0 1128 aa13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 CHCHD2Q9Y6H1 151 aaPredicted RBP13.3□□□□□ -0.28
ECHDC1-220ENST00000528402 IGLV1-36A0A0B4J1U3 117 aa13.29□□□□□ -0.28
ECHDC1-220ENST00000528402 C2orf72A6NCS6 295 aa13.29□□□□□ -0.28
ECHDC1-220ENST00000528402 TMEM212A6NML5 194 aa13.29□□□□□ -0.28
ECHDC1-220ENST00000528402 FAM25AB3EWG3 89 aa13.29□□□□□ -0.28
ECHDC1-220ENST00000528402 FAM25CB3EWG5 89 aa13.29□□□□□ -0.28
ECHDC1-220ENST00000528402 FAM25GB3EWG6 89 aa13.29□□□□□ -0.28
ECHDC1-220ENST00000528402 DCTN6O00399 190 aa13.29□□□□□ -0.28
ECHDC1-220ENST00000528402 SLC16A7O60669 478 aa13.29□□□□□ -0.28
ECHDC1-220ENST00000528402 HPGDSO60760 199 aa13.29□□□□□ -0.28
ECHDC1-220ENST00000528402 UPK3AO75631 287 aa13.29□□□□□ -0.28
ECHDC1-220ENST00000528402 STK17BO94768 372 aa13.29□□□□□ -0.28
ECHDC1-220ENST00000528402 ABHD16AO95870 558 aa13.29□□□□□ -0.28
ECHDC1-220ENST00000528402 NPR2P20594 1047 aa13.29□□□□□ -0.28
ECHDC1-220ENST00000528402 CCR9P51686 369 aa13.29□□□□□ -0.28
ECHDC1-220ENST00000528402 MLF1P58340 268 aa13.29□□□□□ -0.28
ECHDC1-220ENST00000528402 RPS11P62280 158 aaKnown RBP eCLIP13.29□□□□□ -0.28
ECHDC1-220ENST00000528402 TLE3Q04726 772 aa13.29□□□□□ -0.28
ECHDC1-220ENST00000528402 SELENBP1Q13228 472 aa13.29□□□□□ -0.28
ECHDC1-220ENST00000528402 EIF3IQ13347 325 aaKnown RBP13.29□□□□□ -0.28
ECHDC1-220ENST00000528402 INSL4Q14641 139 aa13.29□□□□□ -0.28
ECHDC1-220ENST00000528402 TEX30Q5JUR7 227 aa13.29□□□□□ -0.28
ECHDC1-220ENST00000528402 HACD4Q5VWC8 232 aa13.29□□□□□ -0.28
ECHDC1-220ENST00000528402 LIPNQ5VXI9 398 aa13.29□□□□□ -0.28
ECHDC1-220ENST00000528402 BAIAP2L2Q6UXY1 529 aa13.29□□□□□ -0.28
ECHDC1-220ENST00000528402 RPS19BP1Q86WX3 136 aaKnown RBP13.29□□□□□ -0.28
ECHDC1-220ENST00000528402 PLCZ1Q86YW0 608 aa13.29□□□□□ -0.28
ECHDC1-220ENST00000528402 OR11G2Q8NGC1 345 aa13.29□□□□□ -0.28
ECHDC1-220ENST00000528402 OR5AK2Q8NH90 309 aa13.29□□□□□ -0.28
ECHDC1-220ENST00000528402 ASB10Q8WXI3 467 aa13.29□□□□□ -0.28
ECHDC1-220ENST00000528402 PMEPA1Q969W9 287 aa13.29□□□□□ -0.28
ECHDC1-220ENST00000528402 NTNG2Q96CW9 530 aa13.29□□□□□ -0.28
ECHDC1-220ENST00000528402 SGCZQ96LD1 299 aa13.29□□□□□ -0.28
ECHDC1-220ENST00000528402 CDC6Q99741 560 aa13.29□□□□□ -0.28
ECHDC1-220ENST00000528402 COMMD4Q9H0A8 199 aa13.29□□□□□ -0.28
ECHDC1-220ENST00000528402 CYSLTR2Q9NS75 346 aa13.29□□□□□ -0.28
ECHDC1-220ENST00000528402 SACM1LQ9NTJ5 587 aa13.29□□□□□ -0.28
ECHDC1-220ENST00000528402 KLHL9Q9P2J3 617 aa13.29□□□□□ -0.28
ECHDC1-220ENST00000528402 VDAC3Q9Y277 283 aa13.29□□□□□ -0.28
ECHDC1-220ENST00000528402 CPAMD8Q8IZJ3 1885 aa13.28□□□□□ -0.28
ECHDC1-220ENST00000528402 LOC102725191A0A1B0GVB3 256 aa13.28□□□□□ -0.28
ECHDC1-220ENST00000528402 TVP23AA6NH52 213 aa13.28□□□□□ -0.28
ECHDC1-220ENST00000528402 H7C1C5 153 aa13.28□□□□□ -0.28
ECHDC1-220ENST00000528402 ZNF593O00488 134 aaPredicted RBP13.28□□□□□ -0.28
ECHDC1-220ENST00000528402 KHDRBS3O75525 346 aaKnown RBP13.28□□□□□ -0.28
ECHDC1-220ENST00000528402 AKR7A3O95154 331 aa13.28□□□□□ -0.28
ECHDC1-220ENST00000528402 HPP00738 406 aa13.28□□□□□ -0.28
ECHDC1-220ENST00000528402 HLA-DQA2P01906 255 aa13.28□□□□□ -0.28
ECHDC1-220ENST00000528402 HLA-DQB1P01920 261 aa13.28□□□□□ -0.28
ECHDC1-220ENST00000528402 HRGP04196 525 aa13.28□□□□□ -0.28
ECHDC1-220ENST00000528402 IMPDH2P12268 514 aa13.28□□□□□ -0.28
ECHDC1-220ENST00000528402 SRMP19623 302 aa13.28□□□□□ -0.28
ECHDC1-220ENST00000528402 LCN6P62502 163 aa13.28□□□□□ -0.28
ECHDC1-220ENST00000528402 HSF1Q00613 529 aa13.28□□□□□ -0.28
ECHDC1-220ENST00000528402 INSM1Q01101 510 aaPredicted RBP13.28□□□□□ -0.28
ECHDC1-220ENST00000528402 ROM1Q03395 351 aa13.28□□□□□ -0.28
ECHDC1-220ENST00000528402 CHAF1BQ13112 559 aa13.28□□□□□ -0.28
ECHDC1-220ENST00000528402 SLC22A10Q63ZE4 541 aa13.28□□□□□ -0.28
ECHDC1-220ENST00000528402 CCBE1Q6UXH8 406 aaPredicted RBP13.28□□□□□ -0.28
ECHDC1-220ENST00000528402 SLC35D2Q76EJ3 337 aa13.28□□□□□ -0.28
ECHDC1-220ENST00000528402 GDPD3Q7L5L3 318 aa13.28□□□□□ -0.28
ECHDC1-220ENST00000528402 RAB11FIP2Q7L804 512 aa13.28□□□□□ -0.28
ECHDC1-220ENST00000528402 ZNF679Q8IYX0 411 aa13.28□□□□□ -0.28
ECHDC1-220ENST00000528402 C19orf18Q8NEA5 215 aa13.28□□□□□ -0.28
ECHDC1-220ENST00000528402 POC1BQ8TC44 478 aa13.28□□□□□ -0.28
ECHDC1-220ENST00000528402 PAQR8Q8TEZ7 354 aa13.28□□□□□ -0.28
ECHDC1-220ENST00000528402 CHAC2Q8WUX2 184 aa13.28□□□□□ -0.28
ECHDC1-220ENST00000528402 THEM6Q8WUY1 208 aa13.28□□□□□ -0.28
ECHDC1-220ENST00000528402 NSMAFQ92636 917 aa13.28□□□□□ -0.28
ECHDC1-220ENST00000528402 ARL5BQ96KC2 179 aa13.28□□□□□ -0.28
ECHDC1-220ENST00000528402 C5orf34Q96MH7 638 aa13.28□□□□□ -0.28
ECHDC1-220ENST00000528402 DCBLD2Q96PD2 775 aa13.28□□□□□ -0.28
ECHDC1-220ENST00000528402 RBP7Q96R05 134 aa13.28□□□□□ -0.28
ECHDC1-220ENST00000528402 OR8B4Q96RC9 309 aa13.28□□□□□ -0.28
ECHDC1-220ENST00000528402 SLC22A4Q9H015 551 aa13.28□□□□□ -0.28
ECHDC1-220ENST00000528402 PPIL3Q9H2H8 161 aaKnown RBP13.28□□□□□ -0.28
ECHDC1-220ENST00000528402 TIGARQ9NQ88 270 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms