RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 DAP3P51398 398 aaKnown RBP13.43□□□□□ -0.26
VCAN-211ENST00000513984 BLVRAP53004 296 aa13.43□□□□□ -0.26
VCAN-211ENST00000513984 MYBPHQ13203 477 aa13.43□□□□□ -0.26
VCAN-211ENST00000513984 MELKQ14680 651 aa13.43□□□□□ -0.26
VCAN-211ENST00000513984 OXA1LQ15070 435 aa13.43□□□□□ -0.26
VCAN-211ENST00000513984 FAM205BPQ63HN1 556 aa13.43□□□□□ -0.26
VCAN-211ENST00000513984 SLC22A10Q63ZE4 541 aa13.43□□□□□ -0.26
VCAN-211ENST00000513984 DHRS13Q6UX07 377 aa13.43□□□□□ -0.26
VCAN-211ENST00000513984 TEX19Q8NA77 164 aa13.43□□□□□ -0.26
VCAN-211ENST00000513984 MINDY2Q8NBR6 621 aa13.43□□□□□ -0.26
VCAN-211ENST00000513984 NLGN4YQ8NFZ3 816 aaPredicted RBP13.43□□□□□ -0.26
VCAN-211ENST00000513984 OR6N2Q8NGY6 317 aa13.43□□□□□ -0.26
VCAN-211ENST00000513984 HAVCR2Q8TDQ0 301 aa13.43□□□□□ -0.26
VCAN-211ENST00000513984 RNF32Q9H0A6 362 aa13.43□□□□□ -0.26
VCAN-211ENST00000513984 PPIL3Q9H2H8 161 aaKnown RBP13.43□□□□□ -0.26
VCAN-211ENST00000513984 MIXL1Q9H2W2 232 aa13.43□□□□□ -0.26
VCAN-211ENST00000513984 DAPK2Q9UIK4 370 aa13.43□□□□□ -0.26
VCAN-211ENST00000513984 TMEM14AQ9Y6G1 99 aa13.43□□□□□ -0.26
VCAN-211ENST00000513984 AHCTF1Q8WYP5 2266 aa13.42□□□□□ -0.26
VCAN-211ENST00000513984 ANKRD33BA6NCL7 494 aa13.42□□□□□ -0.26
VCAN-211ENST00000513984 PHYHO14832 338 aa13.42□□□□□ -0.26
VCAN-211ENST00000513984 GPRIN2O60269 458 aa13.42□□□□□ -0.26
VCAN-211ENST00000513984 ABHD16AO95870 558 aa13.42□□□□□ -0.26
VCAN-211ENST00000513984 ALOX5APP20292 161 aa13.42□□□□□ -0.26
VCAN-211ENST00000513984 EDNRAP25101 427 aa13.42□□□□□ -0.26
VCAN-211ENST00000513984 CALRP27797 417 aaKnown RBP13.42□□□□□ -0.26
VCAN-211ENST00000513984 CAV3P56539 151 aa13.42□□□□□ -0.26
VCAN-211ENST00000513984 MRPL28Q13084 256 aaKnown RBP13.42□□□□□ -0.26
VCAN-211ENST00000513984 DNASE1L3Q13609 305 aa13.42□□□□□ -0.26
VCAN-211ENST00000513984 ACSM3Q53FZ2 586 aa13.42□□□□□ -0.26
VCAN-211ENST00000513984 DDI2Q5TDH0 399 aa13.42□□□□□ -0.26
VCAN-211ENST00000513984 HES3Q5TGS1 186 aa13.42□□□□□ -0.26
VCAN-211ENST00000513984 LYSMD2Q8IV50 215 aa13.42□□□□□ -0.26
VCAN-211ENST00000513984 KDM8Q8N371 416 aa13.42□□□□□ -0.26
VCAN-211ENST00000513984 GTPBP8Q8N3Z3 284 aaPredicted RBP13.42□□□□□ -0.26
VCAN-211ENST00000513984 RNF166Q96A37 237 aaPredicted RBP13.42□□□□□ -0.26
VCAN-211ENST00000513984 COX4I2Q96KJ9 171 aa13.42□□□□□ -0.26
VCAN-211ENST00000513984 SGCZQ96LD1 299 aa13.42□□□□□ -0.26
VCAN-211ENST00000513984 CCDC32Q9BV29 185 aa13.42□□□□□ -0.26
VCAN-211ENST00000513984 ABCB9Q9NP78 766 aa13.42□□□□□ -0.26
VCAN-211ENST00000513984 FAIMQ9NVQ4 179 aa13.42□□□□□ -0.26
VCAN-211ENST00000513984 TRAPPC4Q9Y296 219 aa13.42□□□□□ -0.26
VCAN-211ENST00000513984 V9GYH0 126 aa13.42□□□□□ -0.26
VCAN-211ENST00000513984 NCKAP5O14513 1909 aa13.42□□□□□ -0.26
VCAN-211ENST00000513984 MED12Q93074 2177 aa13.42□□□□□ -0.26
VCAN-211ENST00000513984 CACNA1CQ13936 2221 aa13.42□□□□□ -0.26
VCAN-211ENST00000513984 hCG_2014768A0A024R1R8 64 aa13.41□□□□□ -0.26
VCAN-211ENST00000513984 TRBV2A0A0J9YWF9 115 aa13.41□□□□□ -0.26
VCAN-211ENST00000513984 C21orf140B9A014 251 aa13.41□□□□□ -0.26
VCAN-211ENST00000513984 NPIPA5E9PKD4 350 aa13.41□□□□□ -0.26
VCAN-211ENST00000513984 TERTO14746 1132 aaKnown RBP13.41□□□□□ -0.26
VCAN-211ENST00000513984 MAGEB3O15480 346 aa13.41□□□□□ -0.26
VCAN-211ENST00000513984 TBX1O43435 398 aa13.41□□□□□ -0.26
VCAN-211ENST00000513984 SLC16A7O60669 478 aa13.41□□□□□ -0.26
VCAN-211ENST00000513984 TACSTD2P09758 323 aa13.41□□□□□ -0.26
VCAN-211ENST00000513984 LIFP15018 202 aa13.41□□□□□ -0.26
VCAN-211ENST00000513984 CTLA4P16410 223 aa13.41□□□□□ -0.26
VCAN-211ENST00000513984 CRABP1P29762 137 aa13.41□□□□□ -0.26
VCAN-211ENST00000513984 RPS11P62280 158 aaKnown RBP eCLIP13.41□□□□□ -0.26
VCAN-211ENST00000513984 FOXK1P85037 733 aa13.41□□□□□ -0.26
VCAN-211ENST00000513984 HSF1Q00613 529 aa13.41□□□□□ -0.26
VCAN-211ENST00000513984 EGR3Q06889 387 aa13.41□□□□□ -0.26
VCAN-211ENST00000513984 PAMR1Q6UXH9 720 aa13.41□□□□□ -0.26
VCAN-211ENST00000513984 SLC35D2Q76EJ3 337 aa13.41□□□□□ -0.26
VCAN-211ENST00000513984 DPY19L4Q7Z388 723 aa13.41□□□□□ -0.26
VCAN-211ENST00000513984 FAM220AQ7Z4H9 259 aa13.41□□□□□ -0.26
VCAN-211ENST00000513984 CEACAM19Q7Z692 300 aa13.41□□□□□ -0.26
VCAN-211ENST00000513984 TPRA1Q86W33 373 aa13.41□□□□□ -0.26
VCAN-211ENST00000513984 TMEM41AQ96HV5 264 aa13.41□□□□□ -0.26
VCAN-211ENST00000513984 ADAD1Q96M93 576 aaKnown RBP13.41□□□□□ -0.26
VCAN-211ENST00000513984 SDHCQ99643 169 aaPredicted RBP13.41□□□□□ -0.26
VCAN-211ENST00000513984 ATF6BQ99941 703 aa13.41□□□□□ -0.26
VCAN-211ENST00000513984 GPR87Q9BY21 358 aa13.41□□□□□ -0.26
VCAN-211ENST00000513984 ABCB10Q9NRK6 738 aa13.41□□□□□ -0.26
VCAN-211ENST00000513984 P4HTMQ9NXG6 502 aa13.41□□□□□ -0.26
VCAN-211ENST00000513984 MRM2Q9UI43 246 aaKnown RBP13.41□□□□□ -0.26
VCAN-211ENST00000513984 LAMP5Q9UJQ1 280 aa13.41□□□□□ -0.26
VCAN-211ENST00000513984 NPIPA1Q9UND3 350 aa13.41□□□□□ -0.26
VCAN-211ENST00000513984 OTOGLQ3ZCN5 2332 aa13.41□□□□□ -0.26
VCAN-211ENST00000513984 HSPB2A8KAH6 182 aa13.41□□□□□ -0.26
VCAN-211ENST00000513984 UPK3AO75631 287 aa13.41□□□□□ -0.26
VCAN-211ENST00000513984 NCR1O76036 304 aa13.41□□□□□ -0.26
VCAN-211ENST00000513984 GPANK1O95872 356 aa13.41□□□□□ -0.26
VCAN-211ENST00000513984 SERPINA7P05543 415 aa13.41□□□□□ -0.26
VCAN-211ENST00000513984 OCM2P0CE71 109 aa13.41□□□□□ -0.26
VCAN-211ENST00000513984 OCMP0CE72 109 aaPredicted RBP13.41□□□□□ -0.26
VCAN-211ENST00000513984 IFNGR1P15260 489 aa13.41□□□□□ -0.26
VCAN-211ENST00000513984 TGM1P22735 817 aa13.41□□□□□ -0.26
VCAN-211ENST00000513984 MYL9P24844 172 aa13.41□□□□□ -0.26
VCAN-211ENST00000513984 SHC1P29353 583 aa13.41□□□□□ -0.26
VCAN-211ENST00000513984 PSMB10P40306 273 aa13.41□□□□□ -0.26
VCAN-211ENST00000513984 P2RY4P51582 365 aa13.41□□□□□ -0.26
VCAN-211ENST00000513984 POU3F1Q03052 451 aaPredicted RBP13.41□□□□□ -0.26
VCAN-211ENST00000513984 C19orf57Q0VDD7 668 aa13.41□□□□□ -0.26
VCAN-211ENST00000513984 HSPB2Q16082 182 aa13.41□□□□□ -0.26
VCAN-211ENST00000513984 ZNF239Q16600 458 aaKnown RBP13.41□□□□□ -0.26
VCAN-211ENST00000513984 ZMAT1Q5H9K5 638 aa13.41□□□□□ -0.26
VCAN-211ENST00000513984 FAM27D1Q5T7N8 215 aa13.41□□□□□ -0.26
VCAN-211ENST00000513984 ZNF468Q5VIY5 522 aaPredicted RBP13.41□□□□□ -0.26
VCAN-211ENST00000513984 STEAP3Q658P3 488 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms