RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 TBL1YQ9BQ87 522 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 WDR77Q9BQA1 342 aaPredicted RBP4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 MGME1Q9BQP7 344 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 GGACTQ9BVM4 153 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 DUSP16Q9BY84 665 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 MRPL37Q9BZE1 423 aaKnown RBP4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 DERL2Q9GZP9 239 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 C20orf85Q9H1P6 137 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 CDT1Q9H211 546 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 MTIF3Q9H2K0 278 aaKnown RBP4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 UBQLN3Q9H347 655 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 METTL8Q9H825 291 aaKnown RBP4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 ARNT2Q9HBZ2 717 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 SLC25A19Q9HC21 320 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 PNRC2Q9NPJ4 139 aaKnown RBP4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 MMP26Q9NRE1 261 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 ACSS1Q9NUB1 689 aaPredicted RBP4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 PRMT7Q9NVM4 692 aaPredicted RBP4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 TEX10Q9NXF1 929 aaPredicted RBP4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 TAS2R5Q9NYW4 299 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 COX16Q9P0S2 106 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 ABRACLQ9P1F3 81 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 UPB1Q9UBR1 384 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 ICAM5Q9UMF0 924 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 TMED3Q9Y3Q3 217 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 PCDHA10Q9Y5I2 948 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 KPTNQ9Y664 436 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 FRMPD3Q5JV73 1810 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 SPTBN2O15020 2390 aa4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 KMT2BQ9UMN6 2715 aaPredicted RBP4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 ZNF638Q14966 1978 aaKnown RBP4.13□□□□□ -1.75
PDLIM5-211ENST00000508531 A0A0G2JMZ2 1700 aa4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 ACACBO00763 2458 aa4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 FASNP49327 2511 aaKnown RBP4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 A0A087X0M5 115 aa4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 A0A1B0GV90 55 aa4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 A0A1B0GX30 115 aa4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 A0A1W2PPQ1 181 aa4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 OR6C68A6NDL8 312 aa4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 GGT3PA6NGU5 568 aa4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 F5H5P2 479 aa4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 M0QZ92 97 aa4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 TLR4O00206 839 aa4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 ARPC5O15511 151 aa4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 DNAJB6O75190 326 aa4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 CSO75390 466 aaKnown RBP4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 RPP40O75818 363 aaKnown RBP4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 ZNF432O94892 652 aa4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 WISP3O95389 354 aaPredicted RBP4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 SOD1P00441 154 aa4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 PLGP00747 810 aaPredicted RBP4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 IGHV2-5P01817 119 aa4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 KLK3P07288 261 aaPredicted RBP4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 FHP07954 510 aa4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 IL3P08700 152 aa4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 ANXA5P08758 320 aa4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 OR4E1P0C645 316 aa4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 HAPLN1P10915 354 aaPredicted RBP4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 BCKDHAP12694 445 aa4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 ADRB3P13945 408 aa4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 PKMP14618 531 aaKnown RBP4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 CD1DP15813 335 aa4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 CBR1P16152 277 aa4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 EPCAMP16422 314 aa4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 TMEM11P17152 192 aa4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 CXCL3P19876 107 aa4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 FGF7P21781 194 aa4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 UQCRC2P22695 453 aa4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 PTPN3P26045 913 aa4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 NMBRP28336 390 aa4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 PPP2R1BP30154 601 aa4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 AVPR2P30518 371 aa4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 S100A3P33764 101 aa4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 KIR3DL2P43630 455 aa4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 CDX1P47902 265 aaPredicted RBP4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 ZFP36L2P47974 494 aaKnown RBP4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 TAF6P49848 677 aa4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 CCR4P51679 360 aa4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 CCR9P51686 369 aa4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 PRKXP51817 358 aa4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 CTSCP53634 463 aa4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 CRISP1P54107 249 aa4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 CDH11P55287 796 aa4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 TAS2R43P59537 309 aa4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 RPL15P61313 204 aaKnown RBP4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 RAP1AP62834 184 aa4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 SLC7A9P82251 487 aa4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 SORDQ00796 357 aa4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 NAAAQ02083 359 aa4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 TLE3Q04726 772 aa4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 MXD1Q05195 221 aa4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 IL10RBQ08334 325 aa4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 ALKBH1Q13686 389 aaKnown RBP4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 GTF2H2Q13888 395 aa4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 HEPACAMQ14CZ8 416 aa4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 RHEBQ15382 184 aa4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 USF2Q15853 346 aaPredicted RBP4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 RBBP7Q16576 425 aa4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 CDO1Q16878 200 aa4.12□□□□□ -1.75
PDLIM5-211ENST00000508531 ZSWIM7Q19AV6 140 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms