RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 FFAR1O14842 300 aa12.46□□□□□ -0.41
BRCA1-218ENST00000489037 FARS2O95363 451 aaKnown RBP12.46□□□□□ -0.41
BRCA1-218ENST00000489037 DANCRP0C864 163 aa12.46□□□□□ -0.41
BRCA1-218ENST00000489037 CD79AP11912 226 aa12.46□□□□□ -0.41
BRCA1-218ENST00000489037 BMP4P12644 408 aa12.46□□□□□ -0.41
BRCA1-218ENST00000489037 NR2C1P13056 603 aa12.46□□□□□ -0.41
BRCA1-218ENST00000489037 CBR1P16152 277 aa12.46□□□□□ -0.41
BRCA1-218ENST00000489037 SLC9A3P48764 834 aa12.46□□□□□ -0.41
BRCA1-218ENST00000489037 ZNF84P51523 738 aa12.46□□□□□ -0.41
BRCA1-218ENST00000489037 ATP5J2P56134 94 aa12.46□□□□□ -0.41
BRCA1-218ENST00000489037 SPOCK1Q08629 439 aa12.46□□□□□ -0.41
BRCA1-218ENST00000489037 LAPTM4AQ15012 233 aa12.46□□□□□ -0.41
BRCA1-218ENST00000489037 ALG10Q5BKT4 473 aa12.46□□□□□ -0.41
BRCA1-218ENST00000489037 FGD3Q5JSP0 725 aa12.46□□□□□ -0.41
BRCA1-218ENST00000489037 ZNF544Q6NX49 715 aa12.46□□□□□ -0.41
BRCA1-218ENST00000489037 MBOAT2Q6ZWT7 520 aa12.46□□□□□ -0.41
BRCA1-218ENST00000489037 PIWIL3Q7Z3Z3 882 aaKnown RBP12.46□□□□□ -0.41
BRCA1-218ENST00000489037 YTHDF3Q7Z739 585 aaKnown RBP12.46□□□□□ -0.41
BRCA1-218ENST00000489037 OAFQ86UD1 273 aa12.46□□□□□ -0.41
BRCA1-218ENST00000489037 ARHGAP24Q8N264 748 aa12.46□□□□□ -0.41
BRCA1-218ENST00000489037 RBM15BQ8NDT2 890 aaKnown RBP12.46□□□□□ -0.41
BRCA1-218ENST00000489037 IL17RDQ8NFM7 739 aa12.46□□□□□ -0.41
BRCA1-218ENST00000489037 ZNF837Q96EG3 531 aaPredicted RBP12.46□□□□□ -0.41
BRCA1-218ENST00000489037 KATNB1Q9BVA0 655 aa12.46□□□□□ -0.41
BRCA1-218ENST00000489037 NELFAQ9H3P2 528 aa12.46□□□□□ -0.41
BRCA1-218ENST00000489037 NMNAT1Q9HAN9 279 aaPredicted RBP12.46□□□□□ -0.41
BRCA1-218ENST00000489037 MAN2C1Q9NTJ4 1040 aa12.46□□□□□ -0.41
BRCA1-218ENST00000489037 CRNNQ9UBG3 495 aaPredicted RBP12.46□□□□□ -0.41
BRCA1-218ENST00000489037 MOKQ9UQ07 419 aa12.46□□□□□ -0.41
BRCA1-218ENST00000489037 HIF3AQ9Y2N7 669 aa12.46□□□□□ -0.41
BRCA1-218ENST00000489037 V9GYQ6 96 aa12.46□□□□□ -0.41
BRCA1-218ENST00000489037 HIVEP1P15822 2718 aa12.46□□□□□ -0.42
BRCA1-218ENST00000489037 A0A087WUU8 490 aa12.45□□□□□ -0.42
BRCA1-218ENST00000489037 IGHV1-18A0A0C4DH31 117 aa12.45□□□□□ -0.42
BRCA1-218ENST00000489037 E7EQL1 145 aa12.45□□□□□ -0.42
BRCA1-218ENST00000489037 hCG_2039718K7EN88 272 aa12.45□□□□□ -0.42
BRCA1-218ENST00000489037 ARPC2O15144 300 aa12.45□□□□□ -0.42
BRCA1-218ENST00000489037 DHHO43323 396 aa12.45□□□□□ -0.42
BRCA1-218ENST00000489037 SEC14L2O76054 403 aa12.45□□□□□ -0.42
BRCA1-218ENST00000489037 STAMBPO95630 424 aa12.45□□□□□ -0.42
BRCA1-218ENST00000489037 SOD3P08294 240 aa12.45□□□□□ -0.42
BRCA1-218ENST00000489037 QDPRP09417 244 aa12.45□□□□□ -0.42
BRCA1-218ENST00000489037 PAX1P15863 534 aa12.45□□□□□ -0.42
BRCA1-218ENST00000489037 ACADSP16219 412 aa12.45□□□□□ -0.42
BRCA1-218ENST00000489037 TTKP33981 857 aa12.45□□□□□ -0.42
BRCA1-218ENST00000489037 MSX2P35548 267 aaPredicted RBP12.45□□□□□ -0.42
BRCA1-218ENST00000489037 CHRNB3Q05901 458 aa12.45□□□□□ -0.42
BRCA1-218ENST00000489037 NPRL3Q12980 569 aa12.45□□□□□ -0.42
BRCA1-218ENST00000489037 FXNQ16595 210 aa12.45□□□□□ -0.42
BRCA1-218ENST00000489037 GSG1Q2KHT4 349 aa12.45□□□□□ -0.42
BRCA1-218ENST00000489037 PGGHGQ32M88 737 aa12.45□□□□□ -0.42
BRCA1-218ENST00000489037 MUC15Q8N387 334 aa12.45□□□□□ -0.42
BRCA1-218ENST00000489037 WFDC11Q8NEX6 87 aa12.45□□□□□ -0.42
BRCA1-218ENST00000489037 OR51A7Q8NH64 312 aa12.45□□□□□ -0.42
BRCA1-218ENST00000489037 MOSPD2Q8NHP6 518 aa12.45□□□□□ -0.42
BRCA1-218ENST00000489037 BCAS4Q8TDM0 211 aa12.45□□□□□ -0.42
BRCA1-218ENST00000489037 ASB10Q8WXI3 467 aa12.45□□□□□ -0.42
BRCA1-218ENST00000489037 TRAF4Q9BUZ4 470 aaPredicted RBP12.45□□□□□ -0.42
BRCA1-218ENST00000489037 TMUB1Q9BVT8 246 aa12.45□□□□□ -0.42
BRCA1-218ENST00000489037 GRIP2Q9C0E4 1043 aa12.45□□□□□ -0.42
BRCA1-218ENST00000489037 TXNIPQ9H3M7 391 aa12.45□□□□□ -0.42
BRCA1-218ENST00000489037 DENND2DQ9H6A0 471 aaPredicted RBP12.45□□□□□ -0.42
BRCA1-218ENST00000489037 CBLN4Q9NTU7 201 aa12.45□□□□□ -0.42
BRCA1-218ENST00000489037 ZNF701Q9NV72 531 aaPredicted RBP12.45□□□□□ -0.42
BRCA1-218ENST00000489037 FAM53CQ9NYF3 392 aa12.45□□□□□ -0.42
BRCA1-218ENST00000489037 NDUFAF4Q9P032 175 aa12.45□□□□□ -0.42
BRCA1-218ENST00000489037 FBXL3Q9UKT7 428 aa12.45□□□□□ -0.42
BRCA1-218ENST00000489037 AURKCQ9UQB9 309 aa12.45□□□□□ -0.42
BRCA1-218ENST00000489037 MAP1AP78559 2803 aaPredicted RBP12.45□□□□□ -0.42
BRCA1-218ENST00000489037 A0A1W2PRQ8 180 aa12.44□□□□□ -0.42
BRCA1-218ENST00000489037 NPIPB13A6NJU9 1138 aa12.44□□□□□ -0.42
BRCA1-218ENST00000489037 NPIPB4C9JG80 1138 aa12.44□□□□□ -0.42
BRCA1-218ENST00000489037 ATP6V1G2-DDX39BF2Z307 99 aa12.44□□□□□ -0.42
BRCA1-218ENST00000489037 TRMUO75648 421 aaKnown RBP12.44□□□□□ -0.42
BRCA1-218ENST00000489037 PRSS23O95084 383 aa12.44□□□□□ -0.42
BRCA1-218ENST00000489037 UBL3O95164 117 aa12.44□□□□□ -0.42
BRCA1-218ENST00000489037 RAB36O95755 333 aa12.44□□□□□ -0.42
BRCA1-218ENST00000489037 IGKV3-15P01624 115 aa12.44□□□□□ -0.42
BRCA1-218ENST00000489037 TSPAN19P0C672 248 aa12.44□□□□□ -0.42
BRCA1-218ENST00000489037 CECR9P0C854 216 aa12.44□□□□□ -0.42
BRCA1-218ENST00000489037 PGA4P0DJD7 388 aa12.44□□□□□ -0.42
BRCA1-218ENST00000489037 PGA3P0DJD8 388 aa12.44□□□□□ -0.42
BRCA1-218ENST00000489037 OR8G3PP0DMU2 310 aa12.44□□□□□ -0.42
BRCA1-218ENST00000489037 B4GALT1P15291 398 aa12.44□□□□□ -0.42
BRCA1-218ENST00000489037 MAKP20794 623 aa12.44□□□□□ -0.42
BRCA1-218ENST00000489037 APOBEC3AP31941 199 aaPredicted RBP12.44□□□□□ -0.42
BRCA1-218ENST00000489037 RPL4P36578 427 aaKnown RBP12.44□□□□□ -0.42
BRCA1-218ENST00000489037 IDH3GP51553 393 aaPredicted RBP12.44□□□□□ -0.42
BRCA1-218ENST00000489037 CTXN1P60606 82 aa12.44□□□□□ -0.42
BRCA1-218ENST00000489037 TOP3AQ13472 1001 aaPredicted RBP12.44□□□□□ -0.42
BRCA1-218ENST00000489037 DGCR6Q14129 220 aa12.44□□□□□ -0.42
BRCA1-218ENST00000489037 FAM205BPQ63HN1 556 aa12.44□□□□□ -0.42
BRCA1-218ENST00000489037 PODNL1Q6PEZ8 512 aa12.44□□□□□ -0.42
BRCA1-218ENST00000489037 TBPL2Q6SJ96 375 aa12.44□□□□□ -0.42
BRCA1-218ENST00000489037 ZNF627Q7L945 461 aa12.44□□□□□ -0.42
BRCA1-218ENST00000489037 DTX2Q86UW9 622 aa12.44□□□□□ -0.42
BRCA1-218ENST00000489037 MDP1Q86V88 176 aa12.44□□□□□ -0.42
BRCA1-218ENST00000489037 SYT14Q8NB59 555 aa12.44□□□□□ -0.42
BRCA1-218ENST00000489037 NOXO1Q8NFA2 376 aa12.44□□□□□ -0.42
BRCA1-218ENST00000489037 OR4F15Q8NGB8 312 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms